Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt OKGIIK_11960 and mscL are separated by 90 nucleotides mscL and OKGIIK_11970 are separated by 179 nucleotides
OKGIIK_11960: OKGIIK_11960 - Fumarylacetoacetate hydrolase, at 2,575,763 to 2,576,449
_11960
OKGIIK_11965: mscL - large-conductance mechanosensitive channel protein MscL, at 2,576,540 to 2,576,950
mscL
OKGIIK_11970: OKGIIK_11970 - aminopeptidase, at 2,577,130 to 2,578,563
_11970
Position (kb)
2576
2577 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2575.750 kb on + strand at 2575.750 kb on + strand at 2575.750 kb on + strand at 2575.769 kb on + strand at 2575.769 kb on + strand at 2575.769 kb on + strand at 2575.769 kb on + strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.770 kb on - strand at 2575.862 kb on + strand, within OKGIIK_11960 at 2575.862 kb on + strand, within OKGIIK_11960 at 2575.862 kb on + strand, within OKGIIK_11960 at 2575.863 kb on - strand, within OKGIIK_11960 at 2575.863 kb on - strand, within OKGIIK_11960 at 2575.968 kb on - strand, within OKGIIK_11960 at 2576.075 kb on + strand, within OKGIIK_11960 at 2576.075 kb on + strand, within OKGIIK_11960 at 2576.075 kb on + strand, within OKGIIK_11960 at 2576.076 kb on - strand, within OKGIIK_11960 at 2576.076 kb on - strand, within OKGIIK_11960 at 2576.292 kb on + strand, within OKGIIK_11960 at 2576.293 kb on - strand, within OKGIIK_11960 at 2576.293 kb on - strand, within OKGIIK_11960 at 2576.293 kb on - strand, within OKGIIK_11960 at 2576.293 kb on - strand, within OKGIIK_11960 at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.481 kb on + strand at 2576.482 kb on - strand at 2576.482 kb on - strand at 2576.482 kb on - strand at 2576.482 kb on - strand at 2576.482 kb on - strand at 2576.482 kb on - strand at 2576.530 kb on + strand at 2576.530 kb on + strand at 2576.531 kb on - strand at 2576.531 kb on - strand at 2576.777 kb on + strand, within mscL at 2576.778 kb on - strand, within mscL at 2576.949 kb on - strand at 2576.972 kb on - strand at 2577.075 kb on + strand at 2577.075 kb on + strand at 2577.100 kb on + strand at 2577.100 kb on + strand at 2577.221 kb on + strand at 2577.271 kb on + strand at 2577.271 kb on + strand at 2577.271 kb on + strand at 2577.271 kb on + strand at 2577.272 kb on - strand at 2577.272 kb on - strand at 2577.272 kb on - strand at 2577.391 kb on + strand, within OKGIIK_11970 at 2577.392 kb on - strand, within OKGIIK_11970 at 2577.392 kb on - strand, within OKGIIK_11970 at 2577.392 kb on - strand, within OKGIIK_11970 at 2577.392 kb on - strand, within OKGIIK_11970 at 2577.410 kb on - strand, within OKGIIK_11970 at 2577.410 kb on - strand, within OKGIIK_11970 at 2577.410 kb on - strand, within OKGIIK_11970 at 2577.410 kb on - strand, within OKGIIK_11970 at 2577.410 kb on - strand, within OKGIIK_11970 at 2577.412 kb on - strand, within OKGIIK_11970 at 2577.491 kb on - strand, within OKGIIK_11970 at 2577.598 kb on + strand, within OKGIIK_11970 at 2577.598 kb on + strand, within OKGIIK_11970 at 2577.598 kb on + strand, within OKGIIK_11970 at 2577.598 kb on + strand, within OKGIIK_11970 at 2577.599 kb on - strand, within OKGIIK_11970 at 2577.599 kb on - strand, within OKGIIK_11970 at 2577.599 kb on - strand, within OKGIIK_11970 at 2577.599 kb on - strand, within OKGIIK_11970 at 2577.706 kb on + strand, within OKGIIK_11970 at 2577.707 kb on - strand, within OKGIIK_11970 at 2577.707 kb on - strand, within OKGIIK_11970 at 2577.753 kb on + strand, within OKGIIK_11970 at 2577.754 kb on - strand, within OKGIIK_11970 at 2577.848 kb on - strand, within OKGIIK_11970 at 2577.901 kb on + strand, within OKGIIK_11970 at 2577.901 kb on + strand, within OKGIIK_11970 at 2577.901 kb on + strand, within OKGIIK_11970 at 2577.901 kb on + strand, within OKGIIK_11970 at 2577.901 kb on + strand, within OKGIIK_11970 at 2577.901 kb on + strand, within OKGIIK_11970 at 2577.902 kb on - strand, within OKGIIK_11970 at 2577.902 kb on - strand, within OKGIIK_11970 at 2577.902 kb on - strand, within OKGIIK_11970 at 2577.902 kb on - strand, within OKGIIK_11970 at 2577.902 kb on - strand, within OKGIIK_11970 at 2577.902 kb on - strand, within OKGIIK_11970
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 2,575,750 + -1.4 2,575,750 + +0.2 2,575,750 + +1.0 2,575,769 + +0.8 2,575,769 + -1.2 2,575,769 + +1.0 2,575,769 + +0.0 2,575,770 - +0.6 2,575,770 - +1.2 2,575,770 - -0.2 2,575,770 - -1.0 2,575,770 - -1.9 2,575,770 - -2.8 2,575,770 - -2.2 2,575,770 - +0.8 2,575,770 - -1.0 2,575,770 - -1.5 2,575,770 - -0.8 2,575,770 - -0.2 2,575,862 + OKGIIK_11960 0.14 -1.7 2,575,862 + OKGIIK_11960 0.14 -0.5 2,575,862 + OKGIIK_11960 0.14 -0.7 2,575,863 - OKGIIK_11960 0.15 -0.8 2,575,863 - OKGIIK_11960 0.15 +0.1 2,575,968 - OKGIIK_11960 0.30 -0.2 2,576,075 + OKGIIK_11960 0.45 -1.2 2,576,075 + OKGIIK_11960 0.45 +1.5 2,576,075 + OKGIIK_11960 0.45 +0.5 2,576,076 - OKGIIK_11960 0.46 -0.8 2,576,076 - OKGIIK_11960 0.46 +0.4 2,576,292 + OKGIIK_11960 0.77 +0.0 2,576,293 - OKGIIK_11960 0.77 -0.0 2,576,293 - OKGIIK_11960 0.77 -1.7 2,576,293 - OKGIIK_11960 0.77 +0.3 2,576,293 - OKGIIK_11960 0.77 -0.2 2,576,481 + -2.4 2,576,481 + +1.0 2,576,481 + -0.4 2,576,481 + +0.2 2,576,481 + -1.5 2,576,481 + -1.5 2,576,481 + -0.8 2,576,481 + -1.2 2,576,481 + -1.7 2,576,481 + +1.2 2,576,481 + +0.5 2,576,481 + -1.5 2,576,481 + -0.6 2,576,481 + +1.9 2,576,481 + -0.1 2,576,481 + -0.3 2,576,481 + -0.1 2,576,481 + +1.5 2,576,481 + +1.0 2,576,482 - +0.2 2,576,482 - -0.7 2,576,482 - +0.8 2,576,482 - -0.1 2,576,482 - +0.1 2,576,482 - +0.3 2,576,530 + +0.8 2,576,530 + -0.2 2,576,531 - -0.4 2,576,531 - -1.0 2,576,777 + mscL OKGIIK_11965 0.58 -3.0 2,576,778 - mscL OKGIIK_11965 0.58 +0.0 2,576,949 - -0.6 2,576,972 - -0.3 2,577,075 + +0.1 2,577,075 + -1.7 2,577,100 + -0.1 2,577,100 + +0.9 2,577,221 + +0.2 2,577,271 + -0.9 2,577,271 + +0.6 2,577,271 + -0.1 2,577,271 + +1.0 2,577,272 - -0.5 2,577,272 - +0.9 2,577,272 - -0.5 2,577,391 + OKGIIK_11970 0.18 -0.3 2,577,392 - OKGIIK_11970 0.18 +0.8 2,577,392 - OKGIIK_11970 0.18 -0.0 2,577,392 - OKGIIK_11970 0.18 -1.7 2,577,392 - OKGIIK_11970 0.18 -0.8 2,577,410 - OKGIIK_11970 0.20 +1.6 2,577,410 - OKGIIK_11970 0.20 -1.3 2,577,410 - OKGIIK_11970 0.20 -1.4 2,577,410 - OKGIIK_11970 0.20 +0.1 2,577,410 - OKGIIK_11970 0.20 +0.9 2,577,412 - OKGIIK_11970 0.20 +0.3 2,577,491 - OKGIIK_11970 0.25 +0.8 2,577,598 + OKGIIK_11970 0.33 +0.2 2,577,598 + OKGIIK_11970 0.33 -0.5 2,577,598 + OKGIIK_11970 0.33 +0.1 2,577,598 + OKGIIK_11970 0.33 -0.1 2,577,599 - OKGIIK_11970 0.33 +1.2 2,577,599 - OKGIIK_11970 0.33 +0.4 2,577,599 - OKGIIK_11970 0.33 +0.8 2,577,599 - OKGIIK_11970 0.33 -1.0 2,577,706 + OKGIIK_11970 0.40 +1.8 2,577,707 - OKGIIK_11970 0.40 -2.6 2,577,707 - OKGIIK_11970 0.40 -0.2 2,577,753 + OKGIIK_11970 0.43 +0.0 2,577,754 - OKGIIK_11970 0.44 +1.3 2,577,848 - OKGIIK_11970 0.50 +0.5 2,577,901 + OKGIIK_11970 0.54 +1.8 2,577,901 + OKGIIK_11970 0.54 -0.2 2,577,901 + OKGIIK_11970 0.54 +0.3 2,577,901 + OKGIIK_11970 0.54 +1.0 2,577,901 + OKGIIK_11970 0.54 -0.5 2,577,901 + OKGIIK_11970 0.54 -2.1 2,577,902 - OKGIIK_11970 0.54 -2.5 2,577,902 - OKGIIK_11970 0.54 +1.6 2,577,902 - OKGIIK_11970 0.54 +0.3 2,577,902 - OKGIIK_11970 0.54 +0.5 2,577,902 - OKGIIK_11970 0.54 -2.1 2,577,902 - OKGIIK_11970 0.54 +0.5
Or see this region's nucleotide sequence