Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt phoR and phoB are separated by 40 nucleotides phoB and OKGIIK_03795 are separated by 90 nucleotides
OKGIIK_03785: phoR - phosphate regulon sensor histidine kinase PhoR, at 835,701 to 837,008
phoR
OKGIIK_03790: phoB - phosphate regulon transcriptional regulator PhoB, at 837,049 to 837,738
phoB
OKGIIK_03795: OKGIIK_03795 - Putative beta-barrel assembly-enhancing protease, at 837,829 to 839,532
_03795
Position (kb) 837
838 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 836.326 kb on + strand, within phoR at 837.173 kb on + strand, within phoB at 837.173 kb on + strand, within phoB at 837.173 kb on + strand, within phoB at 837.173 kb on + strand, within phoB at 837.173 kb on + strand, within phoB at 837.173 kb on + strand, within phoB at 837.173 kb on + strand, within phoB at 837.173 kb on + strand, within phoB at 837.174 kb on - strand, within phoB at 837.174 kb on - strand, within phoB at 837.174 kb on - strand, within phoB at 837.174 kb on - strand, within phoB at 837.174 kb on - strand, within phoB at 837.174 kb on - strand, within phoB at 837.218 kb on + strand, within phoB at 837.219 kb on - strand, within phoB at 837.219 kb on - strand, within phoB at 837.248 kb on + strand, within phoB at 837.248 kb on + strand, within phoB at 837.248 kb on + strand, within phoB at 837.248 kb on + strand, within phoB at 837.248 kb on + strand, within phoB at 837.249 kb on - strand, within phoB at 837.249 kb on - strand, within phoB at 837.249 kb on - strand, within phoB at 837.249 kb on - strand, within phoB at 837.249 kb on - strand, within phoB at 837.249 kb on - strand, within phoB at 837.434 kb on + strand, within phoB at 837.434 kb on + strand, within phoB at 837.434 kb on + strand, within phoB at 837.434 kb on + strand, within phoB at 837.434 kb on + strand, within phoB at 837.434 kb on + strand, within phoB at 837.435 kb on - strand, within phoB at 837.435 kb on - strand, within phoB at 837.435 kb on - strand, within phoB at 837.435 kb on - strand, within phoB at 837.752 kb on + strand at 837.752 kb on + strand at 837.752 kb on + strand at 837.752 kb on + strand at 837.752 kb on + strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.753 kb on - strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.770 kb on + strand at 837.771 kb on - strand at 837.771 kb on - strand at 837.771 kb on - strand at 837.771 kb on - strand at 837.771 kb on - strand at 837.789 kb on + strand at 837.789 kb on + strand at 837.789 kb on + strand at 837.789 kb on + strand at 837.789 kb on + strand at 837.789 kb on + strand at 838.022 kb on + strand, within OKGIIK_03795 at 838.022 kb on + strand, within OKGIIK_03795 at 838.023 kb on - strand, within OKGIIK_03795 at 838.023 kb on - strand, within OKGIIK_03795 at 838.023 kb on - strand, within OKGIIK_03795 at 838.023 kb on - strand, within OKGIIK_03795 at 838.023 kb on - strand, within OKGIIK_03795 at 838.023 kb on - strand, within OKGIIK_03795 at 838.026 kb on - strand, within OKGIIK_03795 at 838.026 kb on - strand, within OKGIIK_03795 at 838.091 kb on + strand, within OKGIIK_03795 at 838.091 kb on + strand, within OKGIIK_03795 at 838.091 kb on + strand, within OKGIIK_03795 at 838.092 kb on - strand, within OKGIIK_03795 at 838.092 kb on - strand, within OKGIIK_03795 at 838.092 kb on - strand, within OKGIIK_03795 at 838.094 kb on + strand, within OKGIIK_03795 at 838.094 kb on + strand, within OKGIIK_03795 at 838.094 kb on + strand, within OKGIIK_03795 at 838.094 kb on + strand, within OKGIIK_03795 at 838.094 kb on + strand, within OKGIIK_03795 at 838.095 kb on - strand, within OKGIIK_03795 at 838.095 kb on - strand, within OKGIIK_03795 at 838.095 kb on - strand, within OKGIIK_03795 at 838.095 kb on - strand, within OKGIIK_03795 at 838.095 kb on - strand, within OKGIIK_03795 at 838.095 kb on - strand, within OKGIIK_03795 at 838.095 kb on - strand, within OKGIIK_03795 at 838.160 kb on + strand, within OKGIIK_03795 at 838.160 kb on + strand, within OKGIIK_03795 at 838.160 kb on + strand, within OKGIIK_03795 at 838.161 kb on - strand, within OKGIIK_03795 at 838.161 kb on - strand, within OKGIIK_03795 at 838.161 kb on - strand, within OKGIIK_03795 at 838.161 kb on - strand, within OKGIIK_03795 at 838.161 kb on - strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.169 kb on + strand, within OKGIIK_03795 at 838.170 kb on - strand, within OKGIIK_03795 at 838.170 kb on - strand, within OKGIIK_03795 at 838.170 kb on - strand, within OKGIIK_03795 at 838.170 kb on - strand, within OKGIIK_03795 at 838.170 kb on - strand, within OKGIIK_03795 at 838.170 kb on - strand, within OKGIIK_03795 at 838.269 kb on - strand, within OKGIIK_03795 at 838.305 kb on + strand, within OKGIIK_03795 at 838.317 kb on + strand, within OKGIIK_03795 at 838.318 kb on - strand, within OKGIIK_03795 at 838.318 kb on - strand, within OKGIIK_03795 at 838.318 kb on - strand, within OKGIIK_03795 at 838.318 kb on - strand, within OKGIIK_03795 at 838.318 kb on - strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.319 kb on + strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.320 kb on - strand, within OKGIIK_03795 at 838.479 kb on - strand, within OKGIIK_03795 at 838.529 kb on + strand, within OKGIIK_03795 at 838.529 kb on + strand, within OKGIIK_03795 at 838.529 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.532 kb on + strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.533 kb on - strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.592 kb on + strand, within OKGIIK_03795 at 838.593 kb on - strand, within OKGIIK_03795 at 838.593 kb on - strand, within OKGIIK_03795 at 838.593 kb on - strand, within OKGIIK_03795 at 838.593 kb on - strand, within OKGIIK_03795
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 836,326 + phoR OKGIIK_03785 0.48 +1.2 837,173 + phoB OKGIIK_03790 0.18 -0.5 837,173 + phoB OKGIIK_03790 0.18 +0.4 837,173 + phoB OKGIIK_03790 0.18 +0.6 837,173 + phoB OKGIIK_03790 0.18 -0.9 837,173 + phoB OKGIIK_03790 0.18 +0.6 837,173 + phoB OKGIIK_03790 0.18 -0.1 837,173 + phoB OKGIIK_03790 0.18 -0.7 837,173 + phoB OKGIIK_03790 0.18 +2.5 837,174 - phoB OKGIIK_03790 0.18 -0.7 837,174 - phoB OKGIIK_03790 0.18 -1.8 837,174 - phoB OKGIIK_03790 0.18 +1.3 837,174 - phoB OKGIIK_03790 0.18 -1.0 837,174 - phoB OKGIIK_03790 0.18 -0.1 837,174 - phoB OKGIIK_03790 0.18 +0.2 837,218 + phoB OKGIIK_03790 0.24 -0.1 837,219 - phoB OKGIIK_03790 0.25 -0.8 837,219 - phoB OKGIIK_03790 0.25 -1.4 837,248 + phoB OKGIIK_03790 0.29 -0.1 837,248 + phoB OKGIIK_03790 0.29 -0.1 837,248 + phoB OKGIIK_03790 0.29 -0.2 837,248 + phoB OKGIIK_03790 0.29 -0.1 837,248 + phoB OKGIIK_03790 0.29 +1.5 837,249 - phoB OKGIIK_03790 0.29 -0.1 837,249 - phoB OKGIIK_03790 0.29 -0.8 837,249 - phoB OKGIIK_03790 0.29 -2.9 837,249 - phoB OKGIIK_03790 0.29 +0.4 837,249 - phoB OKGIIK_03790 0.29 +0.0 837,249 - phoB OKGIIK_03790 0.29 -1.8 837,434 + phoB OKGIIK_03790 0.56 +0.5 837,434 + phoB OKGIIK_03790 0.56 -0.4 837,434 + phoB OKGIIK_03790 0.56 -1.1 837,434 + phoB OKGIIK_03790 0.56 -0.2 837,434 + phoB OKGIIK_03790 0.56 +0.9 837,434 + phoB OKGIIK_03790 0.56 +0.8 837,435 - phoB OKGIIK_03790 0.56 +1.3 837,435 - phoB OKGIIK_03790 0.56 -1.1 837,435 - phoB OKGIIK_03790 0.56 +0.3 837,435 - phoB OKGIIK_03790 0.56 -0.1 837,752 + +0.9 837,752 + +0.9 837,752 + +0.3 837,752 + -0.8 837,752 + +2.2 837,753 - -0.1 837,753 - +1.9 837,753 - -1.0 837,753 - +1.0 837,753 - +0.9 837,753 - -0.7 837,753 - +2.2 837,753 - -0.2 837,753 - +0.7 837,753 - +0.5 837,753 - -0.8 837,753 - +1.9 837,753 - +0.3 837,753 - +0.3 837,753 - +1.4 837,753 - +0.1 837,753 - +0.6 837,753 - +0.6 837,753 - -0.6 837,753 - +0.9 837,753 - +0.6 837,753 - -1.1 837,753 - +0.8 837,753 - -1.1 837,753 - -0.2 837,753 - -1.4 837,753 - +0.7 837,770 + -0.5 837,770 + +0.1 837,770 + -1.6 837,770 + -0.6 837,770 + +0.2 837,770 + -0.8 837,770 + +0.1 837,770 + +1.1 837,770 + -1.6 837,770 + +1.1 837,770 + -0.9 837,771 - -1.3 837,771 - -2.2 837,771 - -1.2 837,771 - -1.3 837,771 - -0.7 837,789 + -0.1 837,789 + +0.1 837,789 + -0.1 837,789 + -1.5 837,789 + -1.7 837,789 + -1.4 838,022 + OKGIIK_03795 0.11 -0.4 838,022 + OKGIIK_03795 0.11 -0.4 838,023 - OKGIIK_03795 0.11 -0.9 838,023 - OKGIIK_03795 0.11 -0.9 838,023 - OKGIIK_03795 0.11 -0.9 838,023 - OKGIIK_03795 0.11 -1.1 838,023 - OKGIIK_03795 0.11 -2.4 838,023 - OKGIIK_03795 0.11 -1.9 838,026 - OKGIIK_03795 0.12 -1.7 838,026 - OKGIIK_03795 0.12 -2.1 838,091 + OKGIIK_03795 0.15 -1.3 838,091 + OKGIIK_03795 0.15 -0.7 838,091 + OKGIIK_03795 0.15 -0.2 838,092 - OKGIIK_03795 0.15 -0.4 838,092 - OKGIIK_03795 0.15 +0.3 838,092 - OKGIIK_03795 0.15 +0.1 838,094 + OKGIIK_03795 0.16 -0.7 838,094 + OKGIIK_03795 0.16 -1.0 838,094 + OKGIIK_03795 0.16 -0.1 838,094 + OKGIIK_03795 0.16 -0.1 838,094 + OKGIIK_03795 0.16 -1.6 838,095 - OKGIIK_03795 0.16 -0.8 838,095 - OKGIIK_03795 0.16 -1.9 838,095 - OKGIIK_03795 0.16 -0.2 838,095 - OKGIIK_03795 0.16 -0.0 838,095 - OKGIIK_03795 0.16 -1.9 838,095 - OKGIIK_03795 0.16 -1.8 838,095 - OKGIIK_03795 0.16 -0.1 838,160 + OKGIIK_03795 0.19 -1.7 838,160 + OKGIIK_03795 0.19 -0.4 838,160 + OKGIIK_03795 0.19 +0.3 838,161 - OKGIIK_03795 0.19 -0.7 838,161 - OKGIIK_03795 0.19 -0.4 838,161 - OKGIIK_03795 0.19 -1.4 838,161 - OKGIIK_03795 0.19 -0.1 838,161 - OKGIIK_03795 0.19 -0.1 838,169 + OKGIIK_03795 0.20 -1.3 838,169 + OKGIIK_03795 0.20 -0.7 838,169 + OKGIIK_03795 0.20 -3.0 838,169 + OKGIIK_03795 0.20 -1.1 838,169 + OKGIIK_03795 0.20 -0.7 838,169 + OKGIIK_03795 0.20 -0.4 838,169 + OKGIIK_03795 0.20 -3.0 838,169 + OKGIIK_03795 0.20 -1.9 838,169 + OKGIIK_03795 0.20 -1.6 838,170 - OKGIIK_03795 0.20 -0.1 838,170 - OKGIIK_03795 0.20 -0.4 838,170 - OKGIIK_03795 0.20 -0.9 838,170 - OKGIIK_03795 0.20 -1.9 838,170 - OKGIIK_03795 0.20 -0.1 838,170 - OKGIIK_03795 0.20 -2.1 838,269 - OKGIIK_03795 0.26 -0.9 838,305 + OKGIIK_03795 0.28 -1.3 838,317 + OKGIIK_03795 0.29 +0.3 838,318 - OKGIIK_03795 0.29 -1.7 838,318 - OKGIIK_03795 0.29 -1.4 838,318 - OKGIIK_03795 0.29 -1.6 838,318 - OKGIIK_03795 0.29 -0.9 838,318 - OKGIIK_03795 0.29 -3.0 838,319 + OKGIIK_03795 0.29 -0.7 838,319 + OKGIIK_03795 0.29 -0.4 838,319 + OKGIIK_03795 0.29 -1.3 838,319 + OKGIIK_03795 0.29 +0.9 838,319 + OKGIIK_03795 0.29 -0.9 838,319 + OKGIIK_03795 0.29 -2.0 838,319 + OKGIIK_03795 0.29 -0.4 838,319 + OKGIIK_03795 0.29 -0.1 838,319 + OKGIIK_03795 0.29 -0.4 838,319 + OKGIIK_03795 0.29 +0.6 838,319 + OKGIIK_03795 0.29 -0.9 838,319 + OKGIIK_03795 0.29 -0.8 838,319 + OKGIIK_03795 0.29 -0.1 838,320 - OKGIIK_03795 0.29 -0.1 838,320 - OKGIIK_03795 0.29 -0.6 838,320 - OKGIIK_03795 0.29 -1.1 838,320 - OKGIIK_03795 0.29 +0.2 838,320 - OKGIIK_03795 0.29 -0.7 838,320 - OKGIIK_03795 0.29 -0.1 838,320 - OKGIIK_03795 0.29 -1.1 838,320 - OKGIIK_03795 0.29 -0.1 838,320 - OKGIIK_03795 0.29 +0.1 838,320 - OKGIIK_03795 0.29 -1.4 838,320 - OKGIIK_03795 0.29 -1.4 838,320 - OKGIIK_03795 0.29 +0.2 838,320 - OKGIIK_03795 0.29 -1.3 838,479 - OKGIIK_03795 0.38 -1.9 838,529 + OKGIIK_03795 0.41 -1.3 838,529 + OKGIIK_03795 0.41 -1.7 838,529 + OKGIIK_03795 0.41 +1.5 838,532 + OKGIIK_03795 0.41 -1.4 838,532 + OKGIIK_03795 0.41 -1.8 838,532 + OKGIIK_03795 0.41 +0.1 838,532 + OKGIIK_03795 0.41 -0.9 838,532 + OKGIIK_03795 0.41 -2.8 838,532 + OKGIIK_03795 0.41 +0.3 838,532 + OKGIIK_03795 0.41 -1.6 838,532 + OKGIIK_03795 0.41 -1.3 838,532 + OKGIIK_03795 0.41 -0.3 838,532 + OKGIIK_03795 0.41 -0.7 838,532 + OKGIIK_03795 0.41 +0.6 838,532 + OKGIIK_03795 0.41 -1.7 838,532 + OKGIIK_03795 0.41 -1.4 838,532 + OKGIIK_03795 0.41 -0.9 838,532 + OKGIIK_03795 0.41 -0.7 838,532 + OKGIIK_03795 0.41 -1.1 838,532 + OKGIIK_03795 0.41 -0.1 838,533 - OKGIIK_03795 0.41 -1.3 838,533 - OKGIIK_03795 0.41 -0.4 838,533 - OKGIIK_03795 0.41 -0.7 838,533 - OKGIIK_03795 0.41 -0.7 838,533 - OKGIIK_03795 0.41 -1.1 838,533 - OKGIIK_03795 0.41 +1.9 838,533 - OKGIIK_03795 0.41 -0.4 838,533 - OKGIIK_03795 0.41 +0.1 838,533 - OKGIIK_03795 0.41 -0.0 838,592 + OKGIIK_03795 0.45 -0.2 838,592 + OKGIIK_03795 0.45 -0.6 838,592 + OKGIIK_03795 0.45 -0.7 838,592 + OKGIIK_03795 0.45 -0.4 838,592 + OKGIIK_03795 0.45 -0.9 838,592 + OKGIIK_03795 0.45 -0.3 838,592 + OKGIIK_03795 0.45 -0.6 838,592 + OKGIIK_03795 0.45 -1.6 838,592 + OKGIIK_03795 0.45 -0.7 838,593 - OKGIIK_03795 0.45 -0.1 838,593 - OKGIIK_03795 0.45 -2.0 838,593 - OKGIIK_03795 0.45 -0.7 838,593 - OKGIIK_03795 0.45 -0.6
Or see this region's nucleotide sequence