Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt sucC and sucD are separated by 96 nucleotides sucD and OKGIIK_01770 are separated by 70 nucleotides
OKGIIK_01760: sucC - ADP-forming succinate--CoA ligase subunit beta, at 407,705 to 408,865
sucC
OKGIIK_01765: sucD - succinate--CoA ligase subunit alpha, at 408,962 to 409,837
sucD
OKGIIK_01770: OKGIIK_01770 - Transcriptional regulator ArgP, at 409,908 to 410,813
_01770
Position (kb) 408
409
410 Strain fitness (log2 ratio) -1
0
1
2 at 408.863 kb on + strand at 408.863 kb on + strand at 408.863 kb on + strand at 408.940 kb on + strand at 408.940 kb on + strand at 410.008 kb on + strand, within OKGIIK_01770 at 410.008 kb on + strand, within OKGIIK_01770 at 410.008 kb on + strand, within OKGIIK_01770 at 410.008 kb on + strand, within OKGIIK_01770 at 410.008 kb on + strand, within OKGIIK_01770 at 410.008 kb on + strand, within OKGIIK_01770 at 410.009 kb on - strand, within OKGIIK_01770 at 410.009 kb on - strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.152 kb on + strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.153 kb on - strand, within OKGIIK_01770 at 410.317 kb on + strand, within OKGIIK_01770 at 410.317 kb on + strand, within OKGIIK_01770 at 410.317 kb on + strand, within OKGIIK_01770 at 410.317 kb on + strand, within OKGIIK_01770 at 410.318 kb on - strand, within OKGIIK_01770 at 410.318 kb on - strand, within OKGIIK_01770 at 410.318 kb on - strand, within OKGIIK_01770 at 410.318 kb on - strand, within OKGIIK_01770 at 410.487 kb on + strand, within OKGIIK_01770 at 410.487 kb on + strand, within OKGIIK_01770 at 410.488 kb on - strand, within OKGIIK_01770 at 410.699 kb on + strand, within OKGIIK_01770 at 410.699 kb on + strand, within OKGIIK_01770 at 410.699 kb on + strand, within OKGIIK_01770 at 410.700 kb on - strand, within OKGIIK_01770 at 410.700 kb on - strand, within OKGIIK_01770
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 408,863 + +1.1 408,863 + -0.3 408,863 + +0.2 408,940 + +0.4 408,940 + -0.1 410,008 + OKGIIK_01770 0.11 +1.1 410,008 + OKGIIK_01770 0.11 +1.8 410,008 + OKGIIK_01770 0.11 -1.2 410,008 + OKGIIK_01770 0.11 -0.6 410,008 + OKGIIK_01770 0.11 -0.3 410,008 + OKGIIK_01770 0.11 +0.2 410,009 - OKGIIK_01770 0.11 +0.4 410,009 - OKGIIK_01770 0.11 +1.3 410,152 + OKGIIK_01770 0.27 -0.8 410,152 + OKGIIK_01770 0.27 -0.7 410,152 + OKGIIK_01770 0.27 +0.1 410,152 + OKGIIK_01770 0.27 -1.0 410,152 + OKGIIK_01770 0.27 +1.3 410,152 + OKGIIK_01770 0.27 +0.4 410,152 + OKGIIK_01770 0.27 +0.8 410,152 + OKGIIK_01770 0.27 +0.2 410,152 + OKGIIK_01770 0.27 +0.2 410,152 + OKGIIK_01770 0.27 +1.1 410,152 + OKGIIK_01770 0.27 -0.8 410,153 - OKGIIK_01770 0.27 +0.5 410,153 - OKGIIK_01770 0.27 +0.1 410,153 - OKGIIK_01770 0.27 +0.2 410,153 - OKGIIK_01770 0.27 +0.4 410,153 - OKGIIK_01770 0.27 +0.0 410,153 - OKGIIK_01770 0.27 +2.1 410,153 - OKGIIK_01770 0.27 -1.0 410,153 - OKGIIK_01770 0.27 -0.2 410,153 - OKGIIK_01770 0.27 -0.8 410,153 - OKGIIK_01770 0.27 +1.8 410,317 + OKGIIK_01770 0.45 -0.4 410,317 + OKGIIK_01770 0.45 -0.2 410,317 + OKGIIK_01770 0.45 -0.1 410,317 + OKGIIK_01770 0.45 +0.2 410,318 - OKGIIK_01770 0.45 +1.8 410,318 - OKGIIK_01770 0.45 +0.3 410,318 - OKGIIK_01770 0.45 -0.1 410,318 - OKGIIK_01770 0.45 -0.5 410,487 + OKGIIK_01770 0.64 -0.1 410,487 + OKGIIK_01770 0.64 -0.3 410,488 - OKGIIK_01770 0.64 +0.4 410,699 + OKGIIK_01770 0.87 +1.3 410,699 + OKGIIK_01770 0.87 +0.1 410,699 + OKGIIK_01770 0.87 -1.2 410,700 - OKGIIK_01770 0.87 -0.5 410,700 - OKGIIK_01770 0.87 +2.1
Or see this region's nucleotide sequence