Experiment: R2A_PIPES with Aluminum chloride 0.28125 mM
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt mrdA and rodA overlap by 4 nucleotides rodA and OKGIIK_00065 are separated by 121 nucleotides OKGIIK_00065 and OKGIIK_00070 overlap by 4 nucleotides
OKGIIK_00055: mrdA - penicillin-binding protein 2, at 11,663 to 13,669
mrdA
OKGIIK_00060: rodA - rod shape-determining protein RodA, at 13,666 to 14,781
rodA
OKGIIK_00065: OKGIIK_00065 - Gluconate 2-dehydrogenase, at 14,903 to 15,610
_00065
OKGIIK_00070: OKGIIK_00070 - GMC family oxidoreductase, at 15,607 to 17,382
_00070
Position (kb) 13
14
15 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 13.681 kb on + strand at 15.035 kb on + strand, within OKGIIK_00065 at 15.035 kb on + strand, within OKGIIK_00065 at 15.036 kb on - strand, within OKGIIK_00065 at 15.036 kb on - strand, within OKGIIK_00065 at 15.036 kb on - strand, within OKGIIK_00065 at 15.036 kb on - strand, within OKGIIK_00065 at 15.036 kb on - strand, within OKGIIK_00065 at 15.047 kb on + strand, within OKGIIK_00065 at 15.047 kb on + strand, within OKGIIK_00065 at 15.047 kb on + strand, within OKGIIK_00065 at 15.048 kb on - strand, within OKGIIK_00065 at 15.048 kb on - strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.197 kb on + strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.198 kb on - strand, within OKGIIK_00065 at 15.242 kb on + strand, within OKGIIK_00065 at 15.243 kb on - strand, within OKGIIK_00065 at 15.273 kb on - strand, within OKGIIK_00065 at 15.273 kb on - strand, within OKGIIK_00065 at 15.455 kb on + strand, within OKGIIK_00065 at 15.455 kb on + strand, within OKGIIK_00065 at 15.455 kb on + strand, within OKGIIK_00065 at 15.455 kb on + strand, within OKGIIK_00065 at 15.455 kb on + strand, within OKGIIK_00065 at 15.455 kb on + strand, within OKGIIK_00065 at 15.456 kb on - strand, within OKGIIK_00065 at 15.456 kb on - strand, within OKGIIK_00065 at 15.456 kb on - strand, within OKGIIK_00065 at 15.473 kb on + strand, within OKGIIK_00065 at 15.473 kb on + strand, within OKGIIK_00065 at 15.474 kb on - strand, within OKGIIK_00065 at 15.474 kb on - strand, within OKGIIK_00065 at 15.474 kb on - strand, within OKGIIK_00065 at 15.474 kb on - strand, within OKGIIK_00065 at 15.536 kb on + strand, within OKGIIK_00065 at 15.536 kb on + strand, within OKGIIK_00065 at 15.536 kb on + strand, within OKGIIK_00065 at 15.536 kb on + strand, within OKGIIK_00065 at 15.536 kb on + strand, within OKGIIK_00065 at 15.536 kb on + strand, within OKGIIK_00065 at 15.537 kb on - strand, within OKGIIK_00065 at 15.537 kb on - strand, within OKGIIK_00065 at 15.537 kb on - strand, within OKGIIK_00065 at 15.569 kb on + strand at 15.570 kb on - strand at 15.724 kb on + strand at 15.725 kb on - strand at 15.725 kb on - strand at 15.725 kb on - strand at 15.725 kb on - strand at 15.751 kb on + strand at 15.752 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction R2A_PIPES with Aluminum chloride 0.28125 mM remove 13,681 + -1.1 15,035 + OKGIIK_00065 0.19 +0.6 15,035 + OKGIIK_00065 0.19 +0.4 15,036 - OKGIIK_00065 0.19 -1.5 15,036 - OKGIIK_00065 0.19 -0.2 15,036 - OKGIIK_00065 0.19 -0.1 15,036 - OKGIIK_00065 0.19 +0.3 15,036 - OKGIIK_00065 0.19 +0.6 15,047 + OKGIIK_00065 0.20 -0.8 15,047 + OKGIIK_00065 0.20 -0.4 15,047 + OKGIIK_00065 0.20 +0.3 15,048 - OKGIIK_00065 0.20 +0.5 15,048 - OKGIIK_00065 0.20 -1.4 15,197 + OKGIIK_00065 0.42 +0.4 15,197 + OKGIIK_00065 0.42 +0.5 15,197 + OKGIIK_00065 0.42 +0.1 15,197 + OKGIIK_00065 0.42 -0.4 15,197 + OKGIIK_00065 0.42 +1.1 15,197 + OKGIIK_00065 0.42 -0.7 15,197 + OKGIIK_00065 0.42 +0.4 15,197 + OKGIIK_00065 0.42 -0.5 15,197 + OKGIIK_00065 0.42 -0.3 15,197 + OKGIIK_00065 0.42 -1.1 15,197 + OKGIIK_00065 0.42 -1.4 15,197 + OKGIIK_00065 0.42 -1.4 15,197 + OKGIIK_00065 0.42 -0.3 15,197 + OKGIIK_00065 0.42 +0.3 15,197 + OKGIIK_00065 0.42 -2.1 15,197 + OKGIIK_00065 0.42 +1.2 15,197 + OKGIIK_00065 0.42 +1.6 15,197 + OKGIIK_00065 0.42 +1.4 15,198 - OKGIIK_00065 0.42 +1.0 15,198 - OKGIIK_00065 0.42 -1.4 15,198 - OKGIIK_00065 0.42 +0.1 15,198 - OKGIIK_00065 0.42 +0.3 15,198 - OKGIIK_00065 0.42 +0.4 15,198 - OKGIIK_00065 0.42 +0.5 15,198 - OKGIIK_00065 0.42 -0.1 15,198 - OKGIIK_00065 0.42 -0.3 15,198 - OKGIIK_00065 0.42 -0.9 15,198 - OKGIIK_00065 0.42 -0.1 15,198 - OKGIIK_00065 0.42 -1.4 15,198 - OKGIIK_00065 0.42 -0.6 15,198 - OKGIIK_00065 0.42 +0.2 15,198 - OKGIIK_00065 0.42 -1.9 15,198 - OKGIIK_00065 0.42 -0.9 15,198 - OKGIIK_00065 0.42 +0.2 15,198 - OKGIIK_00065 0.42 -0.8 15,198 - OKGIIK_00065 0.42 +1.2 15,198 - OKGIIK_00065 0.42 +1.2 15,198 - OKGIIK_00065 0.42 +1.4 15,198 - OKGIIK_00065 0.42 -1.1 15,242 + OKGIIK_00065 0.48 +0.3 15,243 - OKGIIK_00065 0.48 -1.9 15,273 - OKGIIK_00065 0.52 -0.3 15,273 - OKGIIK_00065 0.52 -2.3 15,455 + OKGIIK_00065 0.78 -1.3 15,455 + OKGIIK_00065 0.78 -0.2 15,455 + OKGIIK_00065 0.78 +0.7 15,455 + OKGIIK_00065 0.78 -1.1 15,455 + OKGIIK_00065 0.78 -0.9 15,455 + OKGIIK_00065 0.78 -0.0 15,456 - OKGIIK_00065 0.78 +0.1 15,456 - OKGIIK_00065 0.78 -0.7 15,456 - OKGIIK_00065 0.78 -0.5 15,473 + OKGIIK_00065 0.81 +0.9 15,473 + OKGIIK_00065 0.81 -0.3 15,474 - OKGIIK_00065 0.81 -0.0 15,474 - OKGIIK_00065 0.81 +0.6 15,474 - OKGIIK_00065 0.81 -0.0 15,474 - OKGIIK_00065 0.81 +0.1 15,536 + OKGIIK_00065 0.89 -0.4 15,536 + OKGIIK_00065 0.89 -0.3 15,536 + OKGIIK_00065 0.89 +1.4 15,536 + OKGIIK_00065 0.89 +0.3 15,536 + OKGIIK_00065 0.89 -1.1 15,536 + OKGIIK_00065 0.89 -1.7 15,537 - OKGIIK_00065 0.90 -0.3 15,537 - OKGIIK_00065 0.90 +1.7 15,537 - OKGIIK_00065 0.90 +0.1 15,569 + -1.4 15,570 - -0.6 15,724 + +0.0 15,725 - +0.5 15,725 - -2.8 15,725 - +1.1 15,725 - -1.0 15,751 + -1.3 15,752 - -0.3
Or see this region's nucleotide sequence