Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06866 and MPMX19_06867 are separated by 121 nucleotides MPMX19_06867 and MPMX19_06868 are separated by 111 nucleotides
MPMX19_06866: MPMX19_06866 - HTH-type transcriptional regulator NimR, at 135,331 to 136,209
_06866
MPMX19_06867: MPMX19_06867 - Sialic acid transporter NanT, at 136,331 to 137,689
_06867
MPMX19_06868: MPMX19_06868 - hypothetical protein, at 137,801 to 139,618
_06868
Position (kb)
136
137
138 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 135.670 kb on + strand, within MPMX19_06866 at 135.784 kb on + strand, within MPMX19_06866 at 136.111 kb on + strand, within MPMX19_06866 at 136.174 kb on + strand at 136.395 kb on + strand at 136.395 kb on + strand at 136.395 kb on + strand at 136.395 kb on + strand at 136.395 kb on + strand at 136.396 kb on - strand at 136.396 kb on - strand at 136.396 kb on - strand at 136.396 kb on - strand at 136.396 kb on - strand at 136.599 kb on + strand, within MPMX19_06867 at 136.599 kb on + strand, within MPMX19_06867 at 136.599 kb on + strand, within MPMX19_06867 at 136.599 kb on + strand, within MPMX19_06867 at 136.599 kb on + strand, within MPMX19_06867 at 136.600 kb on - strand, within MPMX19_06867 at 136.600 kb on - strand, within MPMX19_06867 at 136.600 kb on - strand, within MPMX19_06867 at 136.600 kb on - strand, within MPMX19_06867 at 136.600 kb on - strand, within MPMX19_06867 at 136.600 kb on - strand, within MPMX19_06867 at 136.600 kb on - strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.665 kb on + strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.666 kb on - strand, within MPMX19_06867 at 136.694 kb on + strand, within MPMX19_06867 at 136.694 kb on + strand, within MPMX19_06867 at 136.694 kb on + strand, within MPMX19_06867 at 136.695 kb on - strand, within MPMX19_06867 at 136.695 kb on - strand, within MPMX19_06867 at 136.695 kb on - strand, within MPMX19_06867 at 136.695 kb on - strand, within MPMX19_06867 at 136.695 kb on - strand, within MPMX19_06867 at 136.722 kb on + strand, within MPMX19_06867 at 136.722 kb on + strand, within MPMX19_06867 at 136.944 kb on + strand, within MPMX19_06867 at 136.944 kb on + strand, within MPMX19_06867 at 136.944 kb on + strand, within MPMX19_06867 at 136.945 kb on - strand, within MPMX19_06867 at 136.977 kb on + strand, within MPMX19_06867 at 136.978 kb on + strand, within MPMX19_06867 at 136.978 kb on + strand, within MPMX19_06867 at 136.979 kb on - strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.989 kb on + strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 136.990 kb on - strand, within MPMX19_06867 at 137.262 kb on + strand, within MPMX19_06867 at 137.466 kb on + strand, within MPMX19_06867 at 137.467 kb on - strand, within MPMX19_06867 at 137.467 kb on - strand, within MPMX19_06867 at 137.467 kb on - strand, within MPMX19_06867 at 137.586 kb on + strand at 137.586 kb on + strand at 137.586 kb on + strand at 137.586 kb on + strand at 137.586 kb on + strand at 137.586 kb on + strand at 137.586 kb on + strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.587 kb on - strand at 137.613 kb on + strand at 137.614 kb on - strand at 137.689 kb on + strand at 137.689 kb on + strand at 137.784 kb on + strand at 137.784 kb on + strand at 137.785 kb on - strand at 137.785 kb on - strand at 137.785 kb on - strand at 137.856 kb on + strand at 137.880 kb on + strand at 137.880 kb on + strand at 137.881 kb on - strand at 137.881 kb on - strand at 137.881 kb on - strand at 137.881 kb on - strand at 137.898 kb on + strand at 137.898 kb on + strand at 137.898 kb on + strand at 137.898 kb on + strand at 137.898 kb on + strand at 137.898 kb on + strand at 137.899 kb on - strand at 137.899 kb on - strand at 137.899 kb on - strand at 137.899 kb on - strand at 137.899 kb on - strand at 137.899 kb on - strand at 137.899 kb on - strand at 137.899 kb on - strand at 137.967 kb on + strand at 137.968 kb on - strand at 137.968 kb on - strand at 137.968 kb on - strand at 137.968 kb on - strand at 138.039 kb on + strand, within MPMX19_06868 at 138.063 kb on + strand, within MPMX19_06868 at 138.174 kb on + strand, within MPMX19_06868 at 138.174 kb on + strand, within MPMX19_06868 at 138.175 kb on - strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.210 kb on + strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.211 kb on - strand, within MPMX19_06868 at 138.430 kb on + strand, within MPMX19_06868 at 138.431 kb on - strand, within MPMX19_06868 at 138.431 kb on - strand, within MPMX19_06868 at 138.431 kb on - strand, within MPMX19_06868 at 138.516 kb on + strand, within MPMX19_06868 at 138.517 kb on - strand, within MPMX19_06868 at 138.517 kb on - strand, within MPMX19_06868 at 138.604 kb on - strand, within MPMX19_06868 at 138.669 kb on + strand, within MPMX19_06868 at 138.670 kb on - strand, within MPMX19_06868 at 138.670 kb on - strand, within MPMX19_06868 at 138.670 kb on - strand, within MPMX19_06868
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 135,670 + MPMX19_06866 0.39 -1.4 135,784 + MPMX19_06866 0.52 -0.1 136,111 + MPMX19_06866 0.89 -1.1 136,174 + +0.2 136,395 + -1.4 136,395 + -0.3 136,395 + +0.2 136,395 + -1.6 136,395 + +1.3 136,396 - -0.1 136,396 - -0.6 136,396 - -0.9 136,396 - -2.4 136,396 - -0.6 136,599 + MPMX19_06867 0.20 +0.8 136,599 + MPMX19_06867 0.20 +1.1 136,599 + MPMX19_06867 0.20 +2.6 136,599 + MPMX19_06867 0.20 -0.0 136,599 + MPMX19_06867 0.20 +0.4 136,600 - MPMX19_06867 0.20 -0.2 136,600 - MPMX19_06867 0.20 -0.1 136,600 - MPMX19_06867 0.20 +0.4 136,600 - MPMX19_06867 0.20 +0.2 136,600 - MPMX19_06867 0.20 -1.6 136,600 - MPMX19_06867 0.20 +0.7 136,600 - MPMX19_06867 0.20 -2.6 136,665 + MPMX19_06867 0.25 -1.8 136,665 + MPMX19_06867 0.25 +1.0 136,665 + MPMX19_06867 0.25 -0.1 136,665 + MPMX19_06867 0.25 -1.2 136,665 + MPMX19_06867 0.25 +0.3 136,665 + MPMX19_06867 0.25 -0.4 136,665 + MPMX19_06867 0.25 -0.5 136,665 + MPMX19_06867 0.25 -1.7 136,665 + MPMX19_06867 0.25 +0.1 136,666 - MPMX19_06867 0.25 -0.4 136,666 - MPMX19_06867 0.25 -1.0 136,666 - MPMX19_06867 0.25 -0.6 136,666 - MPMX19_06867 0.25 -0.3 136,666 - MPMX19_06867 0.25 -0.5 136,666 - MPMX19_06867 0.25 -1.5 136,666 - MPMX19_06867 0.25 -0.0 136,666 - MPMX19_06867 0.25 +0.2 136,666 - MPMX19_06867 0.25 -1.1 136,666 - MPMX19_06867 0.25 -1.0 136,694 + MPMX19_06867 0.27 +0.2 136,694 + MPMX19_06867 0.27 -0.9 136,694 + MPMX19_06867 0.27 -1.6 136,695 - MPMX19_06867 0.27 -1.4 136,695 - MPMX19_06867 0.27 +0.6 136,695 - MPMX19_06867 0.27 -1.6 136,695 - MPMX19_06867 0.27 -1.2 136,695 - MPMX19_06867 0.27 -0.4 136,722 + MPMX19_06867 0.29 +0.6 136,722 + MPMX19_06867 0.29 -1.0 136,944 + MPMX19_06867 0.45 +1.3 136,944 + MPMX19_06867 0.45 -0.2 136,944 + MPMX19_06867 0.45 -0.7 136,945 - MPMX19_06867 0.45 +0.4 136,977 + MPMX19_06867 0.48 +1.6 136,978 + MPMX19_06867 0.48 -1.9 136,978 + MPMX19_06867 0.48 +0.8 136,979 - MPMX19_06867 0.48 -1.7 136,989 + MPMX19_06867 0.48 -0.0 136,989 + MPMX19_06867 0.48 -0.0 136,989 + MPMX19_06867 0.48 +0.6 136,989 + MPMX19_06867 0.48 -0.4 136,989 + MPMX19_06867 0.48 -0.4 136,989 + MPMX19_06867 0.48 +1.3 136,989 + MPMX19_06867 0.48 +0.6 136,989 + MPMX19_06867 0.48 +1.0 136,989 + MPMX19_06867 0.48 +0.2 136,989 + MPMX19_06867 0.48 -1.1 136,989 + MPMX19_06867 0.48 -1.2 136,990 - MPMX19_06867 0.48 -0.2 136,990 - MPMX19_06867 0.48 -0.2 136,990 - MPMX19_06867 0.48 -0.8 136,990 - MPMX19_06867 0.48 -1.0 136,990 - MPMX19_06867 0.48 -1.1 136,990 - MPMX19_06867 0.48 -1.3 136,990 - MPMX19_06867 0.48 -0.4 136,990 - MPMX19_06867 0.48 -1.6 136,990 - MPMX19_06867 0.48 -0.4 137,262 + MPMX19_06867 0.69 -0.2 137,466 + MPMX19_06867 0.84 -0.8 137,467 - MPMX19_06867 0.84 -0.2 137,467 - MPMX19_06867 0.84 -1.2 137,467 - MPMX19_06867 0.84 -0.8 137,586 + +0.2 137,586 + -0.0 137,586 + -0.2 137,586 + +0.4 137,586 + -0.6 137,586 + +0.0 137,586 + -0.3 137,587 - -0.7 137,587 - -1.1 137,587 - +1.0 137,587 - +0.8 137,587 - -2.1 137,587 - -1.1 137,587 - +0.9 137,587 - -0.0 137,587 - -1.1 137,587 - -0.4 137,587 - -0.1 137,613 + +0.3 137,614 - -0.6 137,689 + -0.2 137,689 + -0.8 137,784 + -0.4 137,784 + -0.2 137,785 - -0.3 137,785 - -0.9 137,785 - -2.1 137,856 + +1.2 137,880 + -0.2 137,880 + -1.3 137,881 - -2.3 137,881 - -0.4 137,881 - -0.3 137,881 - +0.1 137,898 + -0.0 137,898 + +0.0 137,898 + -0.0 137,898 + +1.6 137,898 + -0.4 137,898 + -1.2 137,899 - +0.2 137,899 - -0.0 137,899 - -0.0 137,899 - +1.0 137,899 - -0.8 137,899 - -0.2 137,899 - +0.1 137,899 - -0.0 137,967 + +1.0 137,968 - -1.3 137,968 - -1.2 137,968 - -1.2 137,968 - +1.0 138,039 + MPMX19_06868 0.13 -0.9 138,063 + MPMX19_06868 0.14 -0.7 138,174 + MPMX19_06868 0.21 -1.8 138,174 + MPMX19_06868 0.21 -0.3 138,175 - MPMX19_06868 0.21 -0.9 138,210 + MPMX19_06868 0.22 -0.2 138,210 + MPMX19_06868 0.22 +0.8 138,210 + MPMX19_06868 0.22 +1.4 138,210 + MPMX19_06868 0.22 -0.1 138,210 + MPMX19_06868 0.22 -0.4 138,210 + MPMX19_06868 0.22 -1.0 138,210 + MPMX19_06868 0.22 -0.4 138,210 + MPMX19_06868 0.22 -1.2 138,211 - MPMX19_06868 0.23 +1.0 138,211 - MPMX19_06868 0.23 -1.0 138,211 - MPMX19_06868 0.23 -1.0 138,211 - MPMX19_06868 0.23 -0.4 138,211 - MPMX19_06868 0.23 -0.4 138,211 - MPMX19_06868 0.23 -0.8 138,211 - MPMX19_06868 0.23 -0.0 138,211 - MPMX19_06868 0.23 -0.4 138,430 + MPMX19_06868 0.35 -1.4 138,431 - MPMX19_06868 0.35 +0.4 138,431 - MPMX19_06868 0.35 +1.3 138,431 - MPMX19_06868 0.35 -1.4 138,516 + MPMX19_06868 0.39 -0.2 138,517 - MPMX19_06868 0.39 -1.0 138,517 - MPMX19_06868 0.39 +0.2 138,604 - MPMX19_06868 0.44 -0.6 138,669 + MPMX19_06868 0.48 -0.7 138,670 - MPMX19_06868 0.48 +0.8 138,670 - MPMX19_06868 0.48 -0.2 138,670 - MPMX19_06868 0.48 +0.1
Or see this region's nucleotide sequence