Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_06843 and MPMX19_06844 are separated by 251 nucleotides MPMX19_06844 and MPMX19_06845 are separated by 13 nucleotides
MPMX19_06843: MPMX19_06843 - hypothetical protein, at 109,766 to 110,500
_06843
MPMX19_06844: MPMX19_06844 - Putrescine--pyruvate aminotransferase, at 110,752 to 112,128
_06844
MPMX19_06845: MPMX19_06845 - hypothetical protein, at 112,142 to 113,011
_06845
Position (kb)
110
111
112
113 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 109.884 kb on + strand, within MPMX19_06843 at 109.885 kb on - strand, within MPMX19_06843 at 109.885 kb on - strand, within MPMX19_06843 at 109.885 kb on - strand, within MPMX19_06843 at 109.959 kb on + strand, within MPMX19_06843 at 110.163 kb on + strand, within MPMX19_06843 at 110.164 kb on - strand, within MPMX19_06843 at 110.248 kb on - strand, within MPMX19_06843 at 110.292 kb on + strand, within MPMX19_06843 at 110.292 kb on + strand, within MPMX19_06843 at 110.337 kb on + strand, within MPMX19_06843 at 110.337 kb on + strand, within MPMX19_06843 at 110.337 kb on + strand, within MPMX19_06843 at 110.472 kb on + strand at 110.473 kb on - strand at 110.473 kb on - strand at 110.473 kb on - strand at 110.473 kb on - strand at 110.864 kb on + strand at 110.864 kb on + strand at 111.113 kb on + strand, within MPMX19_06844 at 111.113 kb on + strand, within MPMX19_06844 at 111.114 kb on - strand, within MPMX19_06844 at 111.164 kb on + strand, within MPMX19_06844 at 111.164 kb on + strand, within MPMX19_06844 at 111.164 kb on + strand, within MPMX19_06844 at 111.164 kb on + strand, within MPMX19_06844 at 111.165 kb on - strand, within MPMX19_06844 at 111.165 kb on - strand, within MPMX19_06844 at 111.165 kb on - strand, within MPMX19_06844 at 111.165 kb on - strand, within MPMX19_06844 at 111.170 kb on + strand, within MPMX19_06844 at 111.170 kb on + strand, within MPMX19_06844 at 111.170 kb on + strand, within MPMX19_06844 at 111.170 kb on + strand, within MPMX19_06844 at 111.171 kb on - strand, within MPMX19_06844 at 111.171 kb on - strand, within MPMX19_06844 at 111.171 kb on - strand, within MPMX19_06844 at 111.171 kb on - strand, within MPMX19_06844 at 111.213 kb on + strand, within MPMX19_06844 at 111.214 kb on - strand, within MPMX19_06844 at 111.218 kb on + strand, within MPMX19_06844 at 111.218 kb on + strand, within MPMX19_06844 at 111.218 kb on + strand, within MPMX19_06844 at 111.218 kb on + strand, within MPMX19_06844 at 111.218 kb on + strand, within MPMX19_06844 at 111.218 kb on + strand, within MPMX19_06844 at 111.218 kb on + strand, within MPMX19_06844 at 111.219 kb on - strand, within MPMX19_06844 at 111.219 kb on - strand, within MPMX19_06844 at 111.219 kb on - strand, within MPMX19_06844 at 111.219 kb on - strand, within MPMX19_06844 at 111.219 kb on - strand, within MPMX19_06844 at 111.219 kb on - strand, within MPMX19_06844 at 111.257 kb on + strand, within MPMX19_06844 at 111.257 kb on + strand, within MPMX19_06844 at 111.258 kb on - strand, within MPMX19_06844 at 111.258 kb on - strand, within MPMX19_06844 at 111.467 kb on + strand, within MPMX19_06844 at 111.467 kb on + strand, within MPMX19_06844 at 111.467 kb on + strand, within MPMX19_06844 at 111.467 kb on + strand, within MPMX19_06844 at 111.467 kb on + strand, within MPMX19_06844 at 111.468 kb on - strand, within MPMX19_06844 at 111.468 kb on - strand, within MPMX19_06844 at 111.468 kb on - strand, within MPMX19_06844 at 111.468 kb on - strand, within MPMX19_06844 at 111.468 kb on - strand, within MPMX19_06844 at 111.468 kb on - strand, within MPMX19_06844 at 111.468 kb on - strand, within MPMX19_06844 at 111.581 kb on + strand, within MPMX19_06844 at 111.581 kb on + strand, within MPMX19_06844 at 111.582 kb on - strand, within MPMX19_06844 at 111.582 kb on - strand, within MPMX19_06844 at 111.684 kb on - strand, within MPMX19_06844 at 111.740 kb on + strand, within MPMX19_06844 at 111.740 kb on + strand, within MPMX19_06844 at 111.741 kb on - strand, within MPMX19_06844 at 111.743 kb on + strand, within MPMX19_06844 at 111.797 kb on + strand, within MPMX19_06844 at 111.797 kb on + strand, within MPMX19_06844 at 111.797 kb on + strand, within MPMX19_06844 at 111.797 kb on + strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.798 kb on - strand, within MPMX19_06844 at 111.879 kb on - strand, within MPMX19_06844 at 111.944 kb on + strand, within MPMX19_06844 at 112.067 kb on + strand at 112.806 kb on + strand, within MPMX19_06845 at 112.807 kb on - strand, within MPMX19_06845 at 112.999 kb on + strand at 112.999 kb on + strand at 113.000 kb on - strand at 113.000 kb on - strand at 113.000 kb on - strand at 113.000 kb on - strand at 113.127 kb on + strand at 113.127 kb on + strand at 113.127 kb on + strand at 113.128 kb on - strand at 113.128 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 109,884 + MPMX19_06843 0.16 -1.1 109,885 - MPMX19_06843 0.16 +0.3 109,885 - MPMX19_06843 0.16 +1.4 109,885 - MPMX19_06843 0.16 -0.6 109,959 + MPMX19_06843 0.26 +1.6 110,163 + MPMX19_06843 0.54 -0.3 110,164 - MPMX19_06843 0.54 -1.0 110,248 - MPMX19_06843 0.66 +0.4 110,292 + MPMX19_06843 0.72 -2.5 110,292 + MPMX19_06843 0.72 -1.0 110,337 + MPMX19_06843 0.78 -0.6 110,337 + MPMX19_06843 0.78 +0.4 110,337 + MPMX19_06843 0.78 -0.2 110,472 + -3.0 110,473 - -0.0 110,473 - +0.0 110,473 - +0.1 110,473 - -0.4 110,864 + -1.8 110,864 + +0.1 111,113 + MPMX19_06844 0.26 +0.1 111,113 + MPMX19_06844 0.26 -1.7 111,114 - MPMX19_06844 0.26 -0.2 111,164 + MPMX19_06844 0.30 -0.4 111,164 + MPMX19_06844 0.30 -1.0 111,164 + MPMX19_06844 0.30 -0.3 111,164 + MPMX19_06844 0.30 +0.2 111,165 - MPMX19_06844 0.30 -0.4 111,165 - MPMX19_06844 0.30 -1.2 111,165 - MPMX19_06844 0.30 -1.5 111,165 - MPMX19_06844 0.30 -1.2 111,170 + MPMX19_06844 0.30 -0.2 111,170 + MPMX19_06844 0.30 -1.0 111,170 + MPMX19_06844 0.30 -1.4 111,170 + MPMX19_06844 0.30 -1.2 111,171 - MPMX19_06844 0.30 -0.4 111,171 - MPMX19_06844 0.30 +1.2 111,171 - MPMX19_06844 0.30 -1.1 111,171 - MPMX19_06844 0.30 -0.9 111,213 + MPMX19_06844 0.33 -2.2 111,214 - MPMX19_06844 0.34 +1.6 111,218 + MPMX19_06844 0.34 -1.5 111,218 + MPMX19_06844 0.34 -0.6 111,218 + MPMX19_06844 0.34 -1.0 111,218 + MPMX19_06844 0.34 -2.2 111,218 + MPMX19_06844 0.34 +0.2 111,218 + MPMX19_06844 0.34 -0.3 111,218 + MPMX19_06844 0.34 +0.1 111,219 - MPMX19_06844 0.34 -0.6 111,219 - MPMX19_06844 0.34 -2.5 111,219 - MPMX19_06844 0.34 -0.7 111,219 - MPMX19_06844 0.34 -2.8 111,219 - MPMX19_06844 0.34 -1.0 111,219 - MPMX19_06844 0.34 -1.8 111,257 + MPMX19_06844 0.37 -0.2 111,257 + MPMX19_06844 0.37 -1.9 111,258 - MPMX19_06844 0.37 -1.4 111,258 - MPMX19_06844 0.37 -1.9 111,467 + MPMX19_06844 0.52 -0.2 111,467 + MPMX19_06844 0.52 -0.6 111,467 + MPMX19_06844 0.52 -0.4 111,467 + MPMX19_06844 0.52 +1.2 111,467 + MPMX19_06844 0.52 -2.4 111,468 - MPMX19_06844 0.52 -0.0 111,468 - MPMX19_06844 0.52 -0.0 111,468 - MPMX19_06844 0.52 -0.8 111,468 - MPMX19_06844 0.52 -0.2 111,468 - MPMX19_06844 0.52 -0.4 111,468 - MPMX19_06844 0.52 -0.5 111,468 - MPMX19_06844 0.52 -0.8 111,581 + MPMX19_06844 0.60 +0.2 111,581 + MPMX19_06844 0.60 -1.0 111,582 - MPMX19_06844 0.60 +1.0 111,582 - MPMX19_06844 0.60 +0.8 111,684 - MPMX19_06844 0.68 +0.8 111,740 + MPMX19_06844 0.72 -0.6 111,740 + MPMX19_06844 0.72 -0.4 111,741 - MPMX19_06844 0.72 -0.3 111,743 + MPMX19_06844 0.72 +0.8 111,797 + MPMX19_06844 0.76 -1.2 111,797 + MPMX19_06844 0.76 +1.6 111,797 + MPMX19_06844 0.76 -0.4 111,797 + MPMX19_06844 0.76 -1.5 111,798 - MPMX19_06844 0.76 -0.2 111,798 - MPMX19_06844 0.76 -2.0 111,798 - MPMX19_06844 0.76 -1.4 111,798 - MPMX19_06844 0.76 -1.3 111,798 - MPMX19_06844 0.76 -0.9 111,798 - MPMX19_06844 0.76 -0.8 111,798 - MPMX19_06844 0.76 -1.7 111,798 - MPMX19_06844 0.76 -1.3 111,798 - MPMX19_06844 0.76 -0.5 111,798 - MPMX19_06844 0.76 -1.1 111,879 - MPMX19_06844 0.82 -0.9 111,944 + MPMX19_06844 0.87 +2.9 112,067 + -1.3 112,806 + MPMX19_06845 0.76 +1.6 112,807 - MPMX19_06845 0.76 -1.2 112,999 + -1.6 112,999 + -1.1 113,000 - +0.8 113,000 - -0.2 113,000 - -0.2 113,000 - -0.2 113,127 + -0.2 113,127 + +1.3 113,127 + -0.4 113,128 - -1.4 113,128 - -0.0
Or see this region's nucleotide sequence