Strain Fitness in Azospirillum sp. SherDot2

Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_05949

Experiment: MGL

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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Per-strain Table

Position	Strand	LocusTag	Fraction	MGL
				remove
93,008	+			-0.6
93,009	-			-0.1
93,009	-			-0.1
93,009	-			-0.3
93,070	+			-0.4
93,091	+			+0.1
93,091	+			-0.1
93,108	+			-1.0
93,108	+			-0.3
93,108	+			-1.3
93,108	+			-0.8
93,108	+			-1.1
93,109	-			-0.6
93,109	-			+1.9
93,132	+			-2.0
93,132	+			-0.6
93,132	+			-0.9
93,132	+			+0.4
93,132	+			-0.5
93,132	+			-0.6
93,132	+			-1.1
93,132	+			+0.3
93,133	-			-1.0
93,133	-			+0.2
93,133	-			+0.1
93,133	-			-1.1
93,133	-			-0.7
93,141	+			-1.3
93,141	+			-1.3
93,581	-	MPMX19_05948	0.64	+1.4
93,581	-	MPMX19_05948	0.64	-0.7
93,581	-	MPMX19_05948	0.64	-0.1
93,694	+	MPMX19_05948	0.88	-1.9
93,694	+	MPMX19_05948	0.88	-1.2
93,694	+	MPMX19_05948	0.88	-0.6
93,694	+	MPMX19_05948	0.88	+0.1
93,694	+	MPMX19_05948	0.88	-0.9
93,694	+	MPMX19_05948	0.88	-0.3
93,694	+	MPMX19_05948	0.88	+0.0
93,694	+	MPMX19_05948	0.88	+0.1
93,694	+	MPMX19_05948	0.88	-1.0
93,694	+	MPMX19_05948	0.88	-0.3
93,694	+	MPMX19_05948	0.88	-0.9
93,694	+	MPMX19_05948	0.88	-1.3
93,694	+	MPMX19_05948	0.88	-0.8
93,694	+	MPMX19_05948	0.88	-1.3
93,694	+	MPMX19_05948	0.88	-1.0
93,694	+	MPMX19_05948	0.88	+0.7
93,694	+	MPMX19_05948	0.88	-0.4
93,694	+	MPMX19_05948	0.88	-1.0
93,694	+	MPMX19_05948	0.88	-2.9
93,694	+	MPMX19_05948	0.88	-0.7
93,694	+	MPMX19_05948	0.88	-2.3
93,694	+	MPMX19_05948	0.88	-0.3
93,694	+	MPMX19_05948	0.88	-0.1
93,694	+	MPMX19_05948	0.88	-0.3
93,694	+	MPMX19_05948	0.88	+0.1
93,694	+	MPMX19_05948	0.88	-1.9
93,694	+	MPMX19_05948	0.88	+0.9
93,694	+	MPMX19_05948	0.88	+0.1
93,694	+	MPMX19_05948	0.88	-0.7
93,694	+	MPMX19_05948	0.88	-0.7
93,694	+	MPMX19_05948	0.88	+0.1
93,694	+	MPMX19_05948	0.88	+1.4
93,694	+	MPMX19_05948	0.88	-1.4
93,694	+	MPMX19_05948	0.88	-1.7
93,694	+	MPMX19_05948	0.88	-1.6
93,694	+	MPMX19_05948	0.88	-0.7
93,694	+	MPMX19_05948	0.88	-2.5
93,695	-	MPMX19_05948	0.89	-0.6
93,695	-	MPMX19_05948	0.89	-0.6
93,695	-	MPMX19_05948	0.89	-1.6
93,695	-	MPMX19_05948	0.89	+0.2
93,695	-	MPMX19_05948	0.89	-2.1
93,695	-	MPMX19_05948	0.89	-1.6
93,695	-	MPMX19_05948	0.89	-0.7
93,695	-	MPMX19_05948	0.89	-0.9
93,695	-	MPMX19_05948	0.89	-0.0
93,695	-	MPMX19_05948	0.89	+0.4
93,695	-	MPMX19_05948	0.89	-0.9
93,695	-	MPMX19_05948	0.89	+0.6
93,695	-	MPMX19_05948	0.89	-1.6
93,695	-	MPMX19_05948	0.89	-1.0
93,695	-	MPMX19_05948	0.89	-2.3
93,695	-	MPMX19_05948	0.89	+0.4
93,695	-	MPMX19_05948	0.89	-0.7
93,695	-	MPMX19_05948	0.89	-0.7
93,695	-	MPMX19_05948	0.89	-1.8
93,695	-	MPMX19_05948	0.89	+0.4
93,695	-	MPMX19_05948	0.89	-1.7
93,695	-	MPMX19_05948	0.89	-0.6
93,695	-	MPMX19_05948	0.89	+0.2
93,695	-	MPMX19_05948	0.89	+0.7
93,695	-	MPMX19_05948	0.89	+0.0
93,695	-	MPMX19_05948	0.89	+0.1
93,695	-	MPMX19_05948	0.89	-0.4
93,695	-	MPMX19_05948	0.89	-0.1
93,695	-	MPMX19_05948	0.89	-0.7
93,695	-	MPMX19_05948	0.89	-0.1
93,695	-	MPMX19_05948	0.89	-2.6
93,695	-	MPMX19_05948	0.89	-0.9
93,695	-	MPMX19_05948	0.89	-1.1
93,695	-	MPMX19_05948	0.89	-0.9
94,126	+	MPMX19_05949	0.17	-1.6
94,126	+	MPMX19_05949	0.17	-1.0
94,126	+	MPMX19_05949	0.17	-1.2
94,127	-	MPMX19_05949	0.17	-0.1
94,127	-	MPMX19_05949	0.17	-1.0
94,127	-	MPMX19_05949	0.17	+0.6
94,127	-	MPMX19_05949	0.17	+2.2
94,127	-	MPMX19_05949	0.17	+0.7
94,201	-	MPMX19_05949	0.20	-1.6
94,201	-	MPMX19_05949	0.20	+1.0
94,201	-	MPMX19_05949	0.20	-1.0
94,201	-	MPMX19_05949	0.20	+0.3
94,201	-	MPMX19_05949	0.20	-0.1
94,399	+	MPMX19_05949	0.29	-0.3
94,399	+	MPMX19_05949	0.29	-0.9
94,399	+	MPMX19_05949	0.29	+0.4
94,399	+	MPMX19_05949	0.29	+0.6
94,399	+	MPMX19_05949	0.29	-0.7
94,399	+	MPMX19_05949	0.29	+0.1
94,399	+	MPMX19_05949	0.29	-2.1
94,399	+	MPMX19_05949	0.29	-3.0
94,399	+	MPMX19_05949	0.29	-0.1
94,399	+	MPMX19_05949	0.29	-0.7
94,399	+	MPMX19_05949	0.29	-0.5
94,399	+	MPMX19_05949	0.29	+0.9
94,399	+	MPMX19_05949	0.29	-1.5
94,399	+	MPMX19_05949	0.29	-0.4
94,399	+	MPMX19_05949	0.29	-2.4
94,399	+	MPMX19_05949	0.29	-1.2
94,399	+	MPMX19_05949	0.29	-0.4
94,399	+	MPMX19_05949	0.29	+0.1
94,399	+	MPMX19_05949	0.29	-1.3
94,399	+	MPMX19_05949	0.29	-0.4
94,399	+	MPMX19_05949	0.29	+0.1
94,399	+	MPMX19_05949	0.29	-2.5
94,399	+	MPMX19_05949	0.29	-0.9
94,399	+	MPMX19_05949	0.29	-0.3
94,399	+	MPMX19_05949	0.29	-1.4
94,400	-	MPMX19_05949	0.29	-2.1
94,400	-	MPMX19_05949	0.29	-0.7
94,400	-	MPMX19_05949	0.29	-0.4
94,400	-	MPMX19_05949	0.29	+1.4
94,400	-	MPMX19_05949	0.29	-0.1
94,400	-	MPMX19_05949	0.29	-1.8
94,400	-	MPMX19_05949	0.29	-0.5
94,400	-	MPMX19_05949	0.29	-0.4
94,400	-	MPMX19_05949	0.29	-1.4
94,400	-	MPMX19_05949	0.29	-1.0
94,400	-	MPMX19_05949	0.29	+0.0
94,400	-	MPMX19_05949	0.29	+0.3
94,400	-	MPMX19_05949	0.29	-0.9
94,400	-	MPMX19_05949	0.29	-1.6
94,400	-	MPMX19_05949	0.29	-0.6
94,400	-	MPMX19_05949	0.29	-1.0
94,400	-	MPMX19_05949	0.29	-1.6
94,400	-	MPMX19_05949	0.29	+0.1
94,400	-	MPMX19_05949	0.29	-1.1
94,400	-	MPMX19_05949	0.29	-0.5
94,400	-	MPMX19_05949	0.29	-1.0
94,400	-	MPMX19_05949	0.29	-0.6
94,400	-	MPMX19_05949	0.29	-0.3
94,400	-	MPMX19_05949	0.29	-0.4
94,400	-	MPMX19_05949	0.29	-0.1
94,400	-	MPMX19_05949	0.29	-0.7
94,400	-	MPMX19_05949	0.29	-1.2
94,400	-	MPMX19_05949	0.29	-2.0
94,542	+	MPMX19_05949	0.35	-1.7
94,542	+	MPMX19_05949	0.35	+0.6
94,543	-	MPMX19_05949	0.35	-0.0
94,727	-	MPMX19_05949	0.43	+0.9
94,846	+	MPMX19_05949	0.49	-1.9
94,847	-	MPMX19_05949	0.49	-0.7
94,847	-	MPMX19_05949	0.49	+1.0
95,053	+	MPMX19_05949	0.58	-0.1
95,053	+	MPMX19_05949	0.58	-0.4
95,053	+	MPMX19_05949	0.58	-1.9
95,053	+	MPMX19_05949	0.58	-0.1
95,053	+	MPMX19_05949	0.58	-0.6
95,054	-	MPMX19_05949	0.58	-0.3
95,054	-	MPMX19_05949	0.58	-1.0
95,054	-	MPMX19_05949	0.58	-1.1
95,054	-	MPMX19_05949	0.58	-0.6
95,054	-	MPMX19_05949	0.58	+1.1
95,054	-	MPMX19_05949	0.58	-0.6
95,054	-	MPMX19_05949	0.58	-0.4
95,086	+	MPMX19_05949	0.59	-1.1
95,087	-	MPMX19_05949	0.59	+0.0
95,087	-	MPMX19_05949	0.59	+0.1
95,320	+	MPMX19_05949	0.70	-0.1
95,320	+	MPMX19_05949	0.70	-2.3
95,320	+	MPMX19_05949	0.70	+0.4
95,321	-	MPMX19_05949	0.70	+0.5
95,413	+	MPMX19_05949	0.74	-0.7
95,413	+	MPMX19_05949	0.74	+0.1
95,413	+	MPMX19_05949	0.74	-0.4
95,413	+	MPMX19_05949	0.74	-1.0
95,414	-	MPMX19_05949	0.74	-0.7
95,414	-	MPMX19_05949	0.74	-0.7
95,414	-	MPMX19_05949	0.74	-1.4
95,414	-	MPMX19_05949	0.74	-1.0
95,414	-	MPMX19_05949	0.74	+2.0
95,414	-	MPMX19_05949	0.74	-1.2
95,414	-	MPMX19_05949	0.74	-0.9
95,414	-	MPMX19_05949	0.74	-1.2
95,608	+	MPMX19_05949	0.82	-0.4
95,608	+	MPMX19_05949	0.82	-0.2
95,608	+	MPMX19_05949	0.82	-0.1
95,608	+	MPMX19_05949	0.82	-1.0
95,608	+	MPMX19_05949	0.82	+0.4
95,608	+	MPMX19_05949	0.82	-0.1
95,608	+	MPMX19_05949	0.82	-0.4
95,608	+	MPMX19_05949	0.82	-1.2
95,608	+	MPMX19_05949	0.82	+0.4
95,608	+	MPMX19_05949	0.82	-1.6
95,608	+	MPMX19_05949	0.82	-0.6
95,608	+	MPMX19_05949	0.82	-0.6
95,608	+	MPMX19_05949	0.82	-2.3
95,608	+	MPMX19_05949	0.82	-1.5
95,608	+	MPMX19_05949	0.82	-1.3
95,608	+	MPMX19_05949	0.82	-0.8
95,608	+	MPMX19_05949	0.82	-1.4
95,608	+	MPMX19_05949	0.82	-0.6
95,608	+	MPMX19_05949	0.82	-0.4
95,608	+	MPMX19_05949	0.82	-0.0
95,608	+	MPMX19_05949	0.82	-0.1
95,608	+	MPMX19_05949	0.82	-0.7
95,608	+	MPMX19_05949	0.82	-1.3
95,608	+	MPMX19_05949	0.82	-1.5
95,608	+	MPMX19_05949	0.82	-0.6
95,608	+	MPMX19_05949	0.82	+0.9
95,608	+	MPMX19_05949	0.82	-0.7
95,608	+	MPMX19_05949	0.82	-0.6
95,608	+	MPMX19_05949	0.82	+0.2
95,609	-	MPMX19_05949	0.82	-2.2
95,609	-	MPMX19_05949	0.82	-1.0
95,609	-	MPMX19_05949	0.82	-1.0
95,609	-	MPMX19_05949	0.82	-0.5
95,609	-	MPMX19_05949	0.82	-0.1
95,609	-	MPMX19_05949	0.82	-1.4
95,609	-	MPMX19_05949	0.82	-1.6
95,609	-	MPMX19_05949	0.82	+0.4
95,609	-	MPMX19_05949	0.82	-0.7
95,609	-	MPMX19_05949	0.82	-1.1
95,609	-	MPMX19_05949	0.82	+1.0
95,609	-	MPMX19_05949	0.82	-0.1
95,609	-	MPMX19_05949	0.82	-1.4
95,609	-	MPMX19_05949	0.82	+1.1
95,609	-	MPMX19_05949	0.82	+0.1
95,609	-	MPMX19_05949	0.82	-1.4
95,609	-	MPMX19_05949	0.82	-1.1
95,609	-	MPMX19_05949	0.82	-1.7
95,609	-	MPMX19_05949	0.82	-1.7
95,609	-	MPMX19_05949	0.82	-0.6
95,609	-	MPMX19_05949	0.82	-1.8
95,609	-	MPMX19_05949	0.82	+1.0
95,609	-	MPMX19_05949	0.82	-1.6
95,609	-	MPMX19_05949	0.82	-0.9
95,609	-	MPMX19_05949	0.82	+0.1
95,609	-	MPMX19_05949	0.82	-0.6
95,609	-	MPMX19_05949	0.82	-0.7
95,609	-	MPMX19_05949	0.82	-1.7
95,609	-	MPMX19_05949	0.82	+0.1
95,609	-	MPMX19_05949	0.82	-0.7
95,818	+			-0.7
95,818	+			-1.0
95,818	+			-0.5
95,818	+			-1.3
95,818	+			-0.2
95,818	+			-0.3
95,818	+			-3.2
95,818	+			-1.1
95,818	+			-1.4
95,818	+			-0.6
95,818	+			+0.3
95,818	+			-1.1
95,818	+			-1.0
95,818	+			-0.7
95,818	+			-1.6
95,818	+			-2.1
95,818	+			-0.9
95,818	+			-1.0
95,818	+			-0.5
95,819	-			-2.1
95,819	-			+1.1
95,819	-			+0.9
95,819	-			-0.5
95,819	-			-2.2
95,819	-			-0.1
95,819	-			-0.7
95,819	-			-1.0
95,819	-			-0.5
95,819	-			-1.3
95,819	-			-0.3
95,819	-			-1.5
95,819	-			-1.1
95,819	-			+1.4
95,819	-			-0.1
95,819	-			-0.0
95,819	-			-1.7
95,819	-			-1.5
95,819	-			-0.5
95,819	-			+0.6
95,819	-			+0.1
95,819	-			-0.5
95,819	-			-1.1
96,004	+			-0.9
96,004	+			+0.6
96,004	+			-0.9
96,004	+			-1.6
96,004	+			+0.1
96,004	+			-0.9
96,004	+			-1.7
96,005	-			-2.2
96,005	-			-0.4
96,813	+	MPMX19_05950	0.30	-2.6
96,813	+	MPMX19_05950	0.30	-0.8
96,813	+	MPMX19_05950	0.30	-0.4
96,813	+	MPMX19_05950	0.30	+1.7
96,814	-	MPMX19_05950	0.31	-0.1
96,814	-	MPMX19_05950	0.31	-1.0
96,814	-	MPMX19_05950	0.31	+0.3
96,814	-	MPMX19_05950	0.31	-0.1
96,814	-	MPMX19_05950	0.31	-0.3
96,814	-	MPMX19_05950	0.31	-1.2
96,814	-	MPMX19_05950	0.31	-0.4
96,831	+	MPMX19_05950	0.34	-0.9
96,831	+	MPMX19_05950	0.34	-0.1
96,831	+	MPMX19_05950	0.34	-0.7
96,831	+	MPMX19_05950	0.34	-0.1
96,832	-	MPMX19_05950	0.34	+0.7
96,832	-	MPMX19_05950	0.34	-0.9
96,832	-	MPMX19_05950	0.34	-1.9
96,832	-	MPMX19_05950	0.34	-1.1
96,832	-	MPMX19_05950	0.34	-0.7
96,832	-	MPMX19_05950	0.34	-0.8
96,832	-	MPMX19_05950	0.34	-2.2
96,832	-	MPMX19_05950	0.34	-0.6
96,996	+	MPMX19_05950	0.62	-0.8

Or see this region's nucleotide sequence