Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05559 and MPMX19_05560 overlap by 1 nucleotides MPMX19_05560 and MPMX19_05561 overlap by 29 nucleotides MPMX19_05561 and MPMX19_05562 are separated by 2 nucleotides MPMX19_05562 and MPMX19_05563 overlap by 8 nucleotides MPMX19_05563 and MPMX19_05564 are separated by 55 nucleotides
MPMX19_05559: MPMX19_05559 - hypothetical protein, at 267,161 to 269,395
_05559
MPMX19_05560: MPMX19_05560 - hypothetical protein, at 269,395 to 269,634
_05560
MPMX19_05561: MPMX19_05561 - 5,6-dimethylbenzimidazole synthase, at 269,606 to 270,262
_05561
MPMX19_05562: MPMX19_05562 - Hydrogenobyrinate a,c-diamide synthase, at 270,265 to 271,578
_05562
MPMX19_05563: MPMX19_05563 - Uroporphyrinogen-III C-methyltransferase, at 271,571 to 272,386
_05563
MPMX19_05564: MPMX19_05564 - Cobalt-precorrin-5B C(1)-methyltransferase, at 272,442 to 273,554
_05564
Position (kb) 270
271
272 Strain fitness (log2 ratio) -2
-1
0
1 at 269.327 kb on + strand at 269.328 kb on - strand at 269.408 kb on - strand at 269.408 kb on - strand at 269.408 kb on - strand at 269.408 kb on - strand at 269.727 kb on + strand, within MPMX19_05561 at 269.727 kb on + strand, within MPMX19_05561 at 269.728 kb on - strand, within MPMX19_05561 at 269.728 kb on - strand, within MPMX19_05561 at 269.728 kb on - strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.865 kb on + strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.866 kb on - strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.985 kb on + strand, within MPMX19_05561 at 269.986 kb on - strand, within MPMX19_05561 at 269.986 kb on - strand, within MPMX19_05561 at 269.986 kb on - strand, within MPMX19_05561 at 270.222 kb on + strand at 270.222 kb on + strand at 270.222 kb on + strand at 270.222 kb on + strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand at 270.223 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 269,327 + +0.2 269,328 - -2.1 269,408 - -0.5 269,408 - -1.2 269,408 - -1.8 269,408 - +0.5 269,727 + MPMX19_05561 0.18 +0.5 269,727 + MPMX19_05561 0.18 -0.5 269,728 - MPMX19_05561 0.19 +0.7 269,728 - MPMX19_05561 0.19 -0.7 269,728 - MPMX19_05561 0.19 -0.8 269,865 + MPMX19_05561 0.39 +0.7 269,865 + MPMX19_05561 0.39 -2.0 269,865 + MPMX19_05561 0.39 -0.1 269,865 + MPMX19_05561 0.39 -1.1 269,865 + MPMX19_05561 0.39 -0.7 269,866 - MPMX19_05561 0.40 -1.1 269,866 - MPMX19_05561 0.40 -0.2 269,866 - MPMX19_05561 0.40 -0.1 269,866 - MPMX19_05561 0.40 -0.0 269,866 - MPMX19_05561 0.40 -1.4 269,985 + MPMX19_05561 0.58 -0.6 269,985 + MPMX19_05561 0.58 -1.1 269,985 + MPMX19_05561 0.58 -1.0 269,985 + MPMX19_05561 0.58 -0.4 269,985 + MPMX19_05561 0.58 -0.7 269,986 - MPMX19_05561 0.58 +0.7 269,986 - MPMX19_05561 0.58 +0.1 269,986 - MPMX19_05561 0.58 +0.1 270,222 + -0.3 270,222 + -0.9 270,222 + -0.5 270,222 + -1.1 270,223 - -1.2 270,223 - -1.0 270,223 - -1.3 270,223 - -0.3 270,223 - -0.3 270,223 - -0.9
Or see this region's nucleotide sequence