Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05553 and MPMX19_05554 overlap by 4 nucleotides MPMX19_05554 and MPMX19_05555 are separated by 7 nucleotides
MPMX19_05553: MPMX19_05553 - hypothetical protein, at 260,421 to 262,397
_05553
MPMX19_05554: MPMX19_05554 - hypothetical protein, at 262,394 to 264,079
_05554
MPMX19_05555: MPMX19_05555 - Protein-glutamate methylesterase/protein-glutamine glutaminase, at 264,087 to 265,223
_05555
Position (kb) 262
263
264
265 Strain fitness (log2 ratio) -2
-1
0
1 at 261.758 kb on + strand, within MPMX19_05553 at 261.759 kb on - strand, within MPMX19_05553 at 263.600 kb on + strand, within MPMX19_05554 at 263.600 kb on + strand, within MPMX19_05554 at 263.600 kb on + strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.601 kb on - strand, within MPMX19_05554 at 263.974 kb on + strand at 263.975 kb on - strand at 264.422 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.719 kb on + strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555 at 264.720 kb on - strand, within MPMX19_05555
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 261,758 + MPMX19_05553 0.68 -1.5 261,759 - MPMX19_05553 0.68 +0.9 263,600 + MPMX19_05554 0.72 +0.1 263,600 + MPMX19_05554 0.72 -1.8 263,600 + MPMX19_05554 0.72 -2.4 263,601 - MPMX19_05554 0.72 -2.7 263,601 - MPMX19_05554 0.72 -0.7 263,601 - MPMX19_05554 0.72 -1.4 263,601 - MPMX19_05554 0.72 -0.5 263,601 - MPMX19_05554 0.72 -0.5 263,601 - MPMX19_05554 0.72 -2.2 263,601 - MPMX19_05554 0.72 -0.5 263,601 - MPMX19_05554 0.72 +0.6 263,601 - MPMX19_05554 0.72 -1.4 263,974 + -1.2 263,975 - -1.3 264,422 + MPMX19_05555 0.29 -0.0 264,719 + MPMX19_05555 0.56 -0.9 264,719 + MPMX19_05555 0.56 -1.2 264,719 + MPMX19_05555 0.56 -1.2 264,719 + MPMX19_05555 0.56 -0.5 264,719 + MPMX19_05555 0.56 -1.4 264,719 + MPMX19_05555 0.56 +0.5 264,719 + MPMX19_05555 0.56 -1.6 264,719 + MPMX19_05555 0.56 +0.6 264,719 + MPMX19_05555 0.56 -1.4 264,719 + MPMX19_05555 0.56 -0.1 264,719 + MPMX19_05555 0.56 -1.0 264,719 + MPMX19_05555 0.56 -0.3 264,719 + MPMX19_05555 0.56 -0.6 264,720 - MPMX19_05555 0.56 +0.3 264,720 - MPMX19_05555 0.56 -0.1 264,720 - MPMX19_05555 0.56 -0.0 264,720 - MPMX19_05555 0.56 -1.2 264,720 - MPMX19_05555 0.56 -0.4 264,720 - MPMX19_05555 0.56 -1.3 264,720 - MPMX19_05555 0.56 -0.8 264,720 - MPMX19_05555 0.56 -1.2 264,720 - MPMX19_05555 0.56 -0.1 264,720 - MPMX19_05555 0.56 +1.5
Or see this region's nucleotide sequence