Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05138 and MPMX19_05139 are separated by 6 nucleotides
MPMX19_05138: MPMX19_05138 - CRISPR-associated endonuclease Cas1, at 627,756 to 628,796
_05138
MPMX19_05139: MPMX19_05139 - CRISPR-associated endoribonuclease Cas2, at 628,803 to 629,093
_05139
Position (kb) 628
629
630 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 628.238 kb on + strand, within MPMX19_05138 at 628.239 kb on - strand, within MPMX19_05138 at 628.239 kb on - strand, within MPMX19_05138 at 628.282 kb on - strand, within MPMX19_05138 at 628.390 kb on + strand, within MPMX19_05138 at 628.391 kb on - strand, within MPMX19_05138 at 628.391 kb on - strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.392 kb on + strand, within MPMX19_05138 at 628.393 kb on - strand, within MPMX19_05138 at 628.393 kb on - strand, within MPMX19_05138 at 628.393 kb on - strand, within MPMX19_05138 at 628.393 kb on - strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.397 kb on + strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.398 kb on - strand, within MPMX19_05138 at 628.586 kb on + strand, within MPMX19_05138 at 628.586 kb on + strand, within MPMX19_05138 at 628.587 kb on - strand, within MPMX19_05138 at 628.587 kb on - strand, within MPMX19_05138 at 628.651 kb on - strand, within MPMX19_05138 at 628.786 kb on + strand at 628.786 kb on + strand at 628.786 kb on + strand at 628.787 kb on - strand at 628.787 kb on - strand at 628.787 kb on - strand at 628.821 kb on + strand at 628.821 kb on + strand at 628.821 kb on + strand at 628.821 kb on + strand at 628.821 kb on + strand at 628.821 kb on + strand at 628.821 kb on + strand at 628.822 kb on - strand at 628.822 kb on - strand at 628.822 kb on - strand at 628.822 kb on - strand at 628.822 kb on - strand at 628.822 kb on - strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.828 kb on + strand at 628.829 kb on - strand at 628.829 kb on - strand at 628.829 kb on - strand at 628.829 kb on - strand at 628.829 kb on - strand at 629.007 kb on + strand, within MPMX19_05139 at 629.007 kb on + strand, within MPMX19_05139 at 629.007 kb on + strand, within MPMX19_05139 at 629.007 kb on + strand, within MPMX19_05139 at 629.007 kb on + strand, within MPMX19_05139 at 629.007 kb on + strand, within MPMX19_05139 at 629.008 kb on - strand, within MPMX19_05139 at 629.008 kb on - strand, within MPMX19_05139 at 629.008 kb on - strand, within MPMX19_05139 at 629.008 kb on - strand, within MPMX19_05139 at 629.008 kb on - strand, within MPMX19_05139 at 629.071 kb on + strand at 629.071 kb on + strand at 629.072 kb on - strand at 629.072 kb on - strand at 629.254 kb on + strand at 629.507 kb on + strand at 629.507 kb on + strand at 629.507 kb on + strand at 629.507 kb on + strand at 629.507 kb on + strand at 629.507 kb on + strand at 629.508 kb on - strand at 629.508 kb on - strand at 629.508 kb on - strand at 629.508 kb on - strand at 629.509 kb on + strand at 629.509 kb on + strand at 629.509 kb on + strand at 629.509 kb on + strand at 629.509 kb on + strand at 629.509 kb on + strand at 629.510 kb on - strand at 629.510 kb on - strand at 629.510 kb on - strand at 629.591 kb on + strand at 629.592 kb on - strand at 629.592 kb on - strand at 629.592 kb on - strand at 629.592 kb on - strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.650 kb on + strand at 629.651 kb on - strand at 629.651 kb on - strand at 629.651 kb on - strand at 629.651 kb on - strand at 629.651 kb on - strand at 629.651 kb on - strand at 629.968 kb on + strand at 629.968 kb on + strand at 629.968 kb on + strand at 629.968 kb on + strand at 629.968 kb on + strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 629.969 kb on - strand at 630.041 kb on + strand at 630.041 kb on + strand at 630.042 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 628,238 + MPMX19_05138 0.46 +1.8 628,239 - MPMX19_05138 0.46 -0.6 628,239 - MPMX19_05138 0.46 +0.2 628,282 - MPMX19_05138 0.51 +0.0 628,390 + MPMX19_05138 0.61 -1.1 628,391 - MPMX19_05138 0.61 -0.7 628,391 - MPMX19_05138 0.61 -0.3 628,392 + MPMX19_05138 0.61 -0.6 628,392 + MPMX19_05138 0.61 +0.9 628,392 + MPMX19_05138 0.61 -0.8 628,392 + MPMX19_05138 0.61 -1.4 628,392 + MPMX19_05138 0.61 -1.2 628,392 + MPMX19_05138 0.61 -1.3 628,392 + MPMX19_05138 0.61 -2.1 628,392 + MPMX19_05138 0.61 -1.9 628,392 + MPMX19_05138 0.61 -0.8 628,392 + MPMX19_05138 0.61 +1.5 628,392 + MPMX19_05138 0.61 -1.1 628,392 + MPMX19_05138 0.61 -0.5 628,393 - MPMX19_05138 0.61 +0.2 628,393 - MPMX19_05138 0.61 -0.9 628,393 - MPMX19_05138 0.61 +0.5 628,393 - MPMX19_05138 0.61 -1.8 628,397 + MPMX19_05138 0.62 +0.5 628,397 + MPMX19_05138 0.62 -1.3 628,397 + MPMX19_05138 0.62 -1.1 628,397 + MPMX19_05138 0.62 -1.9 628,397 + MPMX19_05138 0.62 -0.8 628,397 + MPMX19_05138 0.62 -2.1 628,397 + MPMX19_05138 0.62 -2.1 628,397 + MPMX19_05138 0.62 -1.3 628,397 + MPMX19_05138 0.62 -0.5 628,398 - MPMX19_05138 0.62 -0.6 628,398 - MPMX19_05138 0.62 -0.5 628,398 - MPMX19_05138 0.62 -1.6 628,398 - MPMX19_05138 0.62 +0.9 628,398 - MPMX19_05138 0.62 -1.9 628,398 - MPMX19_05138 0.62 -1.9 628,398 - MPMX19_05138 0.62 -0.8 628,398 - MPMX19_05138 0.62 +0.7 628,586 + MPMX19_05138 0.80 -0.1 628,586 + MPMX19_05138 0.80 -1.4 628,587 - MPMX19_05138 0.80 -2.1 628,587 - MPMX19_05138 0.80 -2.5 628,651 - MPMX19_05138 0.86 -1.1 628,786 + -0.2 628,786 + -0.8 628,786 + -3.0 628,787 - +1.2 628,787 - +0.2 628,787 - -1.3 628,821 + -0.6 628,821 + -0.5 628,821 + -1.9 628,821 + -1.4 628,821 + -0.5 628,821 + -1.6 628,821 + -0.4 628,822 - -2.2 628,822 - +1.8 628,822 - -0.1 628,822 - +0.4 628,822 - -0.8 628,822 - -0.6 628,828 + -1.9 628,828 + -0.4 628,828 + -0.6 628,828 + -0.6 628,828 + +0.5 628,828 + -2.3 628,828 + -0.3 628,828 + +0.4 628,828 + +0.5 628,828 + +0.0 628,829 - -1.6 628,829 - +0.5 628,829 - -0.3 628,829 - -1.4 628,829 - -0.9 629,007 + MPMX19_05139 0.70 -0.2 629,007 + MPMX19_05139 0.70 -1.9 629,007 + MPMX19_05139 0.70 +0.2 629,007 + MPMX19_05139 0.70 -0.9 629,007 + MPMX19_05139 0.70 -2.6 629,007 + MPMX19_05139 0.70 -0.5 629,008 - MPMX19_05139 0.70 +0.2 629,008 - MPMX19_05139 0.70 -1.1 629,008 - MPMX19_05139 0.70 +0.5 629,008 - MPMX19_05139 0.70 -0.6 629,008 - MPMX19_05139 0.70 -2.0 629,071 + -0.2 629,071 + -0.6 629,072 - +0.2 629,072 - +0.4 629,254 + -0.4 629,507 + -0.3 629,507 + +0.5 629,507 + -0.6 629,507 + -1.2 629,507 + +1.9 629,507 + -0.5 629,508 - -0.2 629,508 - -1.8 629,508 - -1.9 629,508 - -0.6 629,509 + +0.6 629,509 + -0.2 629,509 + -0.8 629,509 + -1.6 629,509 + -0.2 629,509 + -0.9 629,510 - -0.3 629,510 - -0.1 629,510 - -0.2 629,591 + -2.3 629,592 - -1.5 629,592 - -0.3 629,592 - -0.6 629,592 - -0.8 629,650 + -0.3 629,650 + -2.1 629,650 + +1.4 629,650 + -0.1 629,650 + -0.8 629,650 + -0.8 629,650 + +0.2 629,650 + -1.9 629,650 + -0.6 629,650 + -1.9 629,650 + -0.8 629,650 + -1.1 629,651 - -0.6 629,651 - +0.2 629,651 - -0.7 629,651 - +0.8 629,651 - -0.6 629,651 - -0.2 629,968 + -0.8 629,968 + -0.3 629,968 + -0.1 629,968 + +0.5 629,968 + +0.1 629,969 - +1.1 629,969 - +0.4 629,969 - -0.8 629,969 - +0.1 629,969 - -1.6 629,969 - -1.0 629,969 - +0.2 629,969 - -0.6 629,969 - -0.1 629,969 - -0.3 630,041 + -0.8 630,041 + -0.5 630,042 - +0.2
Or see this region's nucleotide sequence