Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_05035 and MPMX19_05036 overlap by 4 nucleotides MPMX19_05036 and MPMX19_05037 are separated by 1 nucleotides MPMX19_05037 and MPMX19_05038 overlap by 4 nucleotides MPMX19_05038 and MPMX19_05039 overlap by 4 nucleotides
MPMX19_05035: MPMX19_05035 - ATP synthase subunit a, at 521,741 to 522,415
_05035
MPMX19_05036: MPMX19_05036 - hypothetical protein, at 522,412 to 522,711
_05036
MPMX19_05037: MPMX19_05037 - hypothetical protein, at 522,713 to 522,991
_05037
MPMX19_05038: MPMX19_05038 - ATP synthase epsilon chain, at 522,988 to 523,446
_05038
MPMX19_05039: MPMX19_05039 - ATP synthase subunit beta, at 523,443 to 524,906
_05039
Position (kb)
522
523
524 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 522.012 kb on + strand, within MPMX19_05035 at 522.012 kb on + strand, within MPMX19_05035 at 522.012 kb on + strand, within MPMX19_05035 at 522.012 kb on + strand, within MPMX19_05035 at 522.012 kb on + strand, within MPMX19_05035 at 522.012 kb on + strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.013 kb on - strand, within MPMX19_05035 at 522.153 kb on + strand, within MPMX19_05035 at 522.153 kb on + strand, within MPMX19_05035 at 522.154 kb on - strand, within MPMX19_05035 at 522.154 kb on - strand, within MPMX19_05035 at 522.154 kb on - strand, within MPMX19_05035 at 522.575 kb on + strand, within MPMX19_05036 at 522.575 kb on + strand, within MPMX19_05036 at 522.575 kb on + strand, within MPMX19_05036 at 522.575 kb on + strand, within MPMX19_05036 at 522.576 kb on - strand, within MPMX19_05036 at 522.576 kb on - strand, within MPMX19_05036 at 522.576 kb on - strand, within MPMX19_05036 at 522.604 kb on + strand, within MPMX19_05036 at 522.604 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.611 kb on + strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 522.612 kb on - strand, within MPMX19_05036 at 523.058 kb on + strand, within MPMX19_05038 at 523.058 kb on + strand, within MPMX19_05038 at 523.058 kb on + strand, within MPMX19_05038 at 523.058 kb on + strand, within MPMX19_05038 at 523.058 kb on + strand, within MPMX19_05038 at 523.058 kb on + strand, within MPMX19_05038 at 523.058 kb on + strand, within MPMX19_05038 at 523.059 kb on - strand, within MPMX19_05038 at 523.059 kb on - strand, within MPMX19_05038 at 523.059 kb on - strand, within MPMX19_05038 at 523.059 kb on - strand, within MPMX19_05038 at 523.059 kb on - strand, within MPMX19_05038 at 523.059 kb on - strand, within MPMX19_05038 at 523.059 kb on - strand, within MPMX19_05038 at 523.771 kb on + strand, within MPMX19_05039 at 523.841 kb on - strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.942 kb on + strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039 at 523.943 kb on - strand, within MPMX19_05039
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 522,012 + MPMX19_05035 0.40 -0.1 522,012 + MPMX19_05035 0.40 +0.4 522,012 + MPMX19_05035 0.40 -0.5 522,012 + MPMX19_05035 0.40 -1.0 522,012 + MPMX19_05035 0.40 -2.6 522,012 + MPMX19_05035 0.40 -1.9 522,013 - MPMX19_05035 0.40 -1.8 522,013 - MPMX19_05035 0.40 -0.5 522,013 - MPMX19_05035 0.40 +0.5 522,013 - MPMX19_05035 0.40 -0.0 522,013 - MPMX19_05035 0.40 -1.5 522,013 - MPMX19_05035 0.40 -2.0 522,013 - MPMX19_05035 0.40 -1.9 522,013 - MPMX19_05035 0.40 -0.6 522,153 + MPMX19_05035 0.61 +0.2 522,153 + MPMX19_05035 0.61 -1.2 522,154 - MPMX19_05035 0.61 -0.4 522,154 - MPMX19_05035 0.61 -0.5 522,154 - MPMX19_05035 0.61 -1.1 522,575 + MPMX19_05036 0.54 -1.2 522,575 + MPMX19_05036 0.54 -0.2 522,575 + MPMX19_05036 0.54 +0.4 522,575 + MPMX19_05036 0.54 +1.4 522,576 - MPMX19_05036 0.55 -0.8 522,576 - MPMX19_05036 0.55 +0.5 522,576 - MPMX19_05036 0.55 -0.6 522,604 + MPMX19_05036 0.64 -0.7 522,604 + MPMX19_05036 0.64 -1.7 522,611 + MPMX19_05036 0.66 -0.0 522,611 + MPMX19_05036 0.66 -1.3 522,611 + MPMX19_05036 0.66 -1.2 522,611 + MPMX19_05036 0.66 -0.6 522,611 + MPMX19_05036 0.66 +2.0 522,611 + MPMX19_05036 0.66 -0.0 522,611 + MPMX19_05036 0.66 -1.1 522,611 + MPMX19_05036 0.66 -0.4 522,611 + MPMX19_05036 0.66 -1.6 522,612 - MPMX19_05036 0.67 +1.0 522,612 - MPMX19_05036 0.67 +1.1 522,612 - MPMX19_05036 0.67 +0.4 522,612 - MPMX19_05036 0.67 +0.7 522,612 - MPMX19_05036 0.67 -0.6 522,612 - MPMX19_05036 0.67 -1.4 522,612 - MPMX19_05036 0.67 +0.5 522,612 - MPMX19_05036 0.67 -0.3 522,612 - MPMX19_05036 0.67 -0.5 522,612 - MPMX19_05036 0.67 +0.5 523,058 + MPMX19_05038 0.15 +0.5 523,058 + MPMX19_05038 0.15 -1.4 523,058 + MPMX19_05038 0.15 +1.2 523,058 + MPMX19_05038 0.15 -2.9 523,058 + MPMX19_05038 0.15 -1.9 523,058 + MPMX19_05038 0.15 -1.7 523,058 + MPMX19_05038 0.15 -0.9 523,059 - MPMX19_05038 0.15 +0.2 523,059 - MPMX19_05038 0.15 -1.4 523,059 - MPMX19_05038 0.15 -1.6 523,059 - MPMX19_05038 0.15 +3.5 523,059 - MPMX19_05038 0.15 -0.6 523,059 - MPMX19_05038 0.15 +0.1 523,059 - MPMX19_05038 0.15 -1.4 523,771 + MPMX19_05039 0.22 -1.0 523,841 - MPMX19_05039 0.27 -0.3 523,942 + MPMX19_05039 0.34 -1.2 523,942 + MPMX19_05039 0.34 -0.6 523,942 + MPMX19_05039 0.34 +1.0 523,942 + MPMX19_05039 0.34 -0.4 523,942 + MPMX19_05039 0.34 -2.6 523,942 + MPMX19_05039 0.34 -0.9 523,942 + MPMX19_05039 0.34 -1.4 523,942 + MPMX19_05039 0.34 +0.2 523,942 + MPMX19_05039 0.34 -2.2 523,942 + MPMX19_05039 0.34 +0.1 523,942 + MPMX19_05039 0.34 -1.0 523,942 + MPMX19_05039 0.34 +0.6 523,942 + MPMX19_05039 0.34 +0.0 523,942 + MPMX19_05039 0.34 -0.8 523,942 + MPMX19_05039 0.34 -0.4 523,942 + MPMX19_05039 0.34 -0.7 523,942 + MPMX19_05039 0.34 -1.4 523,943 - MPMX19_05039 0.34 -1.0 523,943 - MPMX19_05039 0.34 -0.6 523,943 - MPMX19_05039 0.34 +1.2 523,943 - MPMX19_05039 0.34 +0.4 523,943 - MPMX19_05039 0.34 -0.0 523,943 - MPMX19_05039 0.34 -0.4 523,943 - MPMX19_05039 0.34 -0.5 523,943 - MPMX19_05039 0.34 +0.0 523,943 - MPMX19_05039 0.34 +0.1
Or see this region's nucleotide sequence