Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04668 and MPMX19_04669 are separated by 112 nucleotides MPMX19_04669 and MPMX19_04670 are separated by 41 nucleotides MPMX19_04670 and MPMX19_04671 are separated by 156 nucleotides
MPMX19_04668: MPMX19_04668 - HTH-type transcriptional regulator DmlR, at 54,586 to 55,485
_04668
MPMX19_04669: MPMX19_04669 - Glucose 1-dehydrogenase, at 55,598 to 56,314
_04669
MPMX19_04670: MPMX19_04670 - hypothetical protein, at 56,356 to 56,910
_04670
MPMX19_04671: MPMX19_04671 - hypothetical protein, at 57,067 to 57,462
_04671
Position (kb) 55
56
57 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 54.909 kb on - strand, within MPMX19_04668 at 54.971 kb on + strand, within MPMX19_04668 at 54.971 kb on + strand, within MPMX19_04668 at 54.972 kb on - strand, within MPMX19_04668 at 55.286 kb on + strand, within MPMX19_04668 at 55.286 kb on + strand, within MPMX19_04668 at 55.517 kb on + strand at 55.517 kb on + strand at 55.517 kb on + strand at 55.517 kb on + strand at 55.517 kb on + strand at 55.517 kb on + strand at 55.517 kb on + strand at 55.517 kb on + strand at 55.517 kb on + strand at 55.518 kb on - strand at 55.518 kb on - strand at 55.518 kb on - strand at 55.518 kb on - strand at 55.518 kb on - strand at 55.518 kb on - strand at 55.518 kb on - strand at 55.518 kb on - strand at 55.537 kb on + strand at 55.537 kb on + strand at 55.537 kb on + strand at 55.538 kb on - strand at 55.560 kb on + strand at 55.560 kb on + strand at 55.561 kb on - strand at 55.561 kb on - strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.592 kb on + strand at 55.593 kb on - strand at 55.593 kb on - strand at 55.593 kb on - strand at 55.593 kb on - strand at 55.593 kb on - strand at 55.934 kb on + strand, within MPMX19_04669 at 55.934 kb on + strand, within MPMX19_04669 at 55.934 kb on + strand, within MPMX19_04669 at 55.934 kb on + strand, within MPMX19_04669 at 55.934 kb on + strand, within MPMX19_04669 at 55.935 kb on - strand, within MPMX19_04669 at 55.935 kb on - strand, within MPMX19_04669 at 55.935 kb on - strand, within MPMX19_04669 at 56.561 kb on - strand, within MPMX19_04670 at 56.716 kb on + strand, within MPMX19_04670 at 56.716 kb on + strand, within MPMX19_04670 at 56.716 kb on + strand, within MPMX19_04670 at 56.716 kb on + strand, within MPMX19_04670 at 56.716 kb on + strand, within MPMX19_04670 at 56.716 kb on + strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.717 kb on - strand, within MPMX19_04670 at 56.854 kb on - strand, within MPMX19_04670 at 56.854 kb on - strand, within MPMX19_04670 at 56.854 kb on - strand, within MPMX19_04670 at 56.854 kb on - strand, within MPMX19_04670 at 56.985 kb on - strand at 56.985 kb on - strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.007 kb on + strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.008 kb on - strand at 57.130 kb on - strand, within MPMX19_04671
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 54,909 - MPMX19_04668 0.36 -0.4 54,971 + MPMX19_04668 0.43 -0.9 54,971 + MPMX19_04668 0.43 -1.7 54,972 - MPMX19_04668 0.43 +0.7 55,286 + MPMX19_04668 0.78 -0.5 55,286 + MPMX19_04668 0.78 -2.1 55,517 + -0.1 55,517 + +1.5 55,517 + +0.5 55,517 + -1.3 55,517 + -1.5 55,517 + +0.1 55,517 + -1.3 55,517 + -2.2 55,517 + -0.9 55,518 - -0.7 55,518 - -0.2 55,518 - -0.6 55,518 - -1.1 55,518 - +1.1 55,518 - -0.9 55,518 - -0.7 55,518 - -1.8 55,537 + -2.5 55,537 + +0.7 55,537 + -1.9 55,538 - -0.5 55,560 + +0.7 55,560 + -0.4 55,561 - -1.0 55,561 - -0.1 55,592 + -1.7 55,592 + -1.7 55,592 + +0.9 55,592 + +1.2 55,592 + +0.1 55,592 + +0.1 55,592 + -1.2 55,592 + +0.4 55,592 + -1.2 55,593 - +1.5 55,593 - -1.1 55,593 - +0.0 55,593 - -0.5 55,593 - -0.4 55,934 + MPMX19_04669 0.47 -0.5 55,934 + MPMX19_04669 0.47 -2.9 55,934 + MPMX19_04669 0.47 +0.0 55,934 + MPMX19_04669 0.47 -1.4 55,934 + MPMX19_04669 0.47 -1.6 55,935 - MPMX19_04669 0.47 +0.5 55,935 - MPMX19_04669 0.47 -1.1 55,935 - MPMX19_04669 0.47 -0.5 56,561 - MPMX19_04670 0.37 -1.3 56,716 + MPMX19_04670 0.65 -0.5 56,716 + MPMX19_04670 0.65 -0.4 56,716 + MPMX19_04670 0.65 +0.1 56,716 + MPMX19_04670 0.65 -0.3 56,716 + MPMX19_04670 0.65 -1.0 56,716 + MPMX19_04670 0.65 +1.5 56,717 - MPMX19_04670 0.65 +0.3 56,717 - MPMX19_04670 0.65 +0.1 56,717 - MPMX19_04670 0.65 -0.9 56,717 - MPMX19_04670 0.65 -0.9 56,717 - MPMX19_04670 0.65 +1.5 56,717 - MPMX19_04670 0.65 +0.3 56,717 - MPMX19_04670 0.65 -0.4 56,717 - MPMX19_04670 0.65 -0.9 56,717 - MPMX19_04670 0.65 -1.2 56,717 - MPMX19_04670 0.65 -0.5 56,717 - MPMX19_04670 0.65 -0.8 56,854 - MPMX19_04670 0.90 -1.0 56,854 - MPMX19_04670 0.90 -0.3 56,854 - MPMX19_04670 0.90 +1.2 56,854 - MPMX19_04670 0.90 +0.4 56,985 - +0.1 56,985 - +0.2 57,007 + -1.6 57,007 + +1.2 57,007 + -1.2 57,007 + -1.1 57,007 + -1.0 57,007 + -1.2 57,007 + -0.3 57,007 + -3.2 57,007 + -0.5 57,007 + +1.5 57,007 + -1.1 57,007 + -0.7 57,007 + -0.1 57,007 + +0.9 57,007 + +1.5 57,007 + +0.4 57,007 + +0.0 57,007 + -1.7 57,007 + -0.7 57,007 + -0.1 57,007 + +0.8 57,008 - -1.7 57,008 - +0.1 57,008 - +1.5 57,008 - +0.9 57,008 - +0.7 57,008 - -0.7 57,008 - -0.5 57,008 - -0.9 57,008 - -0.5 57,008 - -0.2 57,008 - -0.2 57,008 - +0.5 57,008 - -0.3 57,130 - MPMX19_04671 0.16 +0.4
Or see this region's nucleotide sequence