Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_04598 and MPMX19_04599 overlap by 4 nucleotides MPMX19_04599 and MPMX19_04600 are separated by 116 nucleotides MPMX19_04600 and MPMX19_04601 are separated by 569 nucleotides
MPMX19_04598: MPMX19_04598 - putative ABC transporter ATP-binding protein YadG, at 982,744 to 983,670
_04598
MPMX19_04599: MPMX19_04599 - Inner membrane transport permease YadH, at 983,667 to 984,428
_04599
MPMX19_04600: MPMX19_04600 - hypothetical protein, at 984,545 to 984,994
_04600
MPMX19_04601: MPMX19_04601 - hypothetical protein, at 985,564 to 986,859
_04601
Position (kb) 984
985 Strain fitness (log2 ratio) -2
-1
0
1
2 at 983.599 kb on + strand at 983.599 kb on + strand at 983.599 kb on + strand at 983.600 kb on - strand at 983.600 kb on - strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.694 kb on + strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.695 kb on - strand at 983.769 kb on + strand, within MPMX19_04599 at 983.769 kb on + strand, within MPMX19_04599 at 983.769 kb on + strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.770 kb on - strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.829 kb on + strand, within MPMX19_04599 at 983.830 kb on - strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.884 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.907 kb on + strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.908 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.920 kb on - strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.934 kb on + strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.935 kb on - strand, within MPMX19_04599 at 983.982 kb on + strand, within MPMX19_04599 at 983.983 kb on - strand, within MPMX19_04599 at 984.222 kb on + strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.223 kb on - strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.282 kb on + strand, within MPMX19_04599 at 984.283 kb on - strand, within MPMX19_04599 at 984.313 kb on - strand, within MPMX19_04599 at 984.313 kb on - strand, within MPMX19_04599 at 984.412 kb on - strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.534 kb on + strand at 984.535 kb on - strand at 984.535 kb on - strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.263 kb on + strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.264 kb on - strand at 985.274 kb on + strand at 985.275 kb on - strand at 985.275 kb on - strand at 985.275 kb on - strand at 985.275 kb on - strand at 985.276 kb on + strand at 985.277 kb on - strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.400 kb on + strand at 985.401 kb on - strand at 985.401 kb on - strand at 985.401 kb on - strand at 985.501 kb on + strand at 985.501 kb on + strand at 985.502 kb on - strand at 985.502 kb on - strand at 985.502 kb on - strand at 985.628 kb on + strand at 985.642 kb on + strand at 985.642 kb on + strand at 985.643 kb on - strand at 985.655 kb on - strand at 985.673 kb on - strand at 985.720 kb on + strand, within MPMX19_04601 at 985.720 kb on + strand, within MPMX19_04601 at 985.720 kb on + strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.721 kb on - strand, within MPMX19_04601 at 985.753 kb on + strand, within MPMX19_04601 at 985.754 kb on - strand, within MPMX19_04601 at 985.861 kb on + strand, within MPMX19_04601 at 985.862 kb on - strand, within MPMX19_04601 at 985.862 kb on - strand, within MPMX19_04601 at 985.932 kb on + strand, within MPMX19_04601 at 985.932 kb on + strand, within MPMX19_04601 at 985.932 kb on + strand, within MPMX19_04601 at 985.933 kb on - strand, within MPMX19_04601 at 985.945 kb on + strand, within MPMX19_04601 at 985.945 kb on + strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601 at 985.946 kb on - strand, within MPMX19_04601
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 983,599 + -1.2 983,599 + -1.3 983,599 + -0.8 983,600 - +1.1 983,600 - -1.5 983,694 + +0.1 983,694 + +0.6 983,694 + -0.6 983,694 + -0.2 983,694 + -0.2 983,694 + +0.1 983,694 + -1.6 983,694 + +0.2 983,694 + -1.0 983,694 + +0.4 983,694 + -0.4 983,694 + +0.4 983,694 + -1.5 983,694 + -1.8 983,694 + -0.8 983,694 + +0.6 983,694 + +0.7 983,694 + -0.9 983,694 + -0.3 983,694 + -0.1 983,695 - +0.2 983,695 - -1.2 983,695 - -0.8 983,695 - -0.4 983,695 - +0.1 983,695 - -1.2 983,695 - -1.3 983,769 + MPMX19_04599 0.13 -0.5 983,769 + MPMX19_04599 0.13 -0.8 983,769 + MPMX19_04599 0.13 -0.4 983,770 - MPMX19_04599 0.14 +0.1 983,770 - MPMX19_04599 0.14 -0.4 983,770 - MPMX19_04599 0.14 +0.7 983,770 - MPMX19_04599 0.14 -1.5 983,829 + MPMX19_04599 0.21 -1.9 983,829 + MPMX19_04599 0.21 +0.1 983,829 + MPMX19_04599 0.21 -1.2 983,830 - MPMX19_04599 0.21 +0.5 983,884 + MPMX19_04599 0.28 +0.6 983,884 + MPMX19_04599 0.28 +0.4 983,884 + MPMX19_04599 0.28 +0.4 983,907 + MPMX19_04599 0.31 -0.1 983,907 + MPMX19_04599 0.31 -2.0 983,907 + MPMX19_04599 0.31 -0.0 983,907 + MPMX19_04599 0.31 +0.1 983,907 + MPMX19_04599 0.31 +1.7 983,907 + MPMX19_04599 0.31 -0.2 983,907 + MPMX19_04599 0.31 -1.0 983,907 + MPMX19_04599 0.31 -1.2 983,907 + MPMX19_04599 0.31 -1.8 983,907 + MPMX19_04599 0.31 +0.8 983,907 + MPMX19_04599 0.31 -0.8 983,907 + MPMX19_04599 0.31 +0.3 983,907 + MPMX19_04599 0.31 -0.5 983,908 - MPMX19_04599 0.32 +0.6 983,908 - MPMX19_04599 0.32 -0.2 983,908 - MPMX19_04599 0.32 +0.2 983,908 - MPMX19_04599 0.32 -0.7 983,908 - MPMX19_04599 0.32 -1.6 983,908 - MPMX19_04599 0.32 -0.7 983,920 - MPMX19_04599 0.33 -0.8 983,920 - MPMX19_04599 0.33 -1.3 983,920 - MPMX19_04599 0.33 -2.0 983,934 + MPMX19_04599 0.35 +0.8 983,934 + MPMX19_04599 0.35 -0.4 983,934 + MPMX19_04599 0.35 -1.8 983,934 + MPMX19_04599 0.35 -0.8 983,934 + MPMX19_04599 0.35 -0.6 983,935 - MPMX19_04599 0.35 +1.2 983,935 - MPMX19_04599 0.35 -0.6 983,935 - MPMX19_04599 0.35 -0.9 983,935 - MPMX19_04599 0.35 -1.2 983,935 - MPMX19_04599 0.35 -0.2 983,935 - MPMX19_04599 0.35 +0.8 983,935 - MPMX19_04599 0.35 -0.8 983,982 + MPMX19_04599 0.41 +0.4 983,983 - MPMX19_04599 0.41 -0.9 984,222 + MPMX19_04599 0.73 -1.1 984,223 - MPMX19_04599 0.73 -1.3 984,223 - MPMX19_04599 0.73 +0.8 984,223 - MPMX19_04599 0.73 -0.7 984,223 - MPMX19_04599 0.73 -0.8 984,282 + MPMX19_04599 0.81 -0.8 984,282 + MPMX19_04599 0.81 +0.1 984,282 + MPMX19_04599 0.81 -0.1 984,282 + MPMX19_04599 0.81 -0.6 984,282 + MPMX19_04599 0.81 +0.4 984,282 + MPMX19_04599 0.81 -1.0 984,283 - MPMX19_04599 0.81 -0.4 984,313 - MPMX19_04599 0.85 +2.4 984,313 - MPMX19_04599 0.85 -1.3 984,412 - +0.7 984,534 + -0.3 984,534 + +1.1 984,534 + +0.4 984,534 + -0.6 984,534 + -1.1 984,535 - -0.6 984,535 - -1.3 985,263 + +0.1 985,263 + +1.4 985,263 + -1.2 985,263 + -0.8 985,263 + -0.5 985,264 - +1.1 985,264 - +0.8 985,264 - -0.2 985,264 - -0.8 985,264 - +0.8 985,264 - -0.4 985,264 - +0.4 985,264 - +0.3 985,264 - -1.7 985,264 - +0.3 985,274 + +0.8 985,275 - -1.8 985,275 - +1.1 985,275 - -1.6 985,275 - -0.4 985,276 + -0.8 985,277 - -0.3 985,400 + -0.2 985,400 + -2.2 985,400 + -0.8 985,400 + +0.1 985,400 + -1.6 985,400 + -0.4 985,400 + -0.8 985,400 + -1.8 985,400 + +0.2 985,401 - -1.1 985,401 - +0.8 985,401 - -1.8 985,501 + +0.1 985,501 + -0.7 985,502 - +0.1 985,502 - -0.6 985,502 - +0.1 985,628 + -1.3 985,642 + +0.6 985,642 + -1.3 985,643 - -0.6 985,655 - -0.8 985,673 - +0.5 985,720 + MPMX19_04601 0.12 +0.3 985,720 + MPMX19_04601 0.12 +0.3 985,720 + MPMX19_04601 0.12 -1.4 985,721 - MPMX19_04601 0.12 +1.1 985,721 - MPMX19_04601 0.12 +0.1 985,721 - MPMX19_04601 0.12 +0.1 985,721 - MPMX19_04601 0.12 +0.4 985,721 - MPMX19_04601 0.12 +0.1 985,721 - MPMX19_04601 0.12 -0.2 985,721 - MPMX19_04601 0.12 -1.2 985,721 - MPMX19_04601 0.12 -0.2 985,753 + MPMX19_04601 0.15 +1.0 985,754 - MPMX19_04601 0.15 -1.9 985,861 + MPMX19_04601 0.23 +0.1 985,862 - MPMX19_04601 0.23 -0.2 985,862 - MPMX19_04601 0.23 -0.1 985,932 + MPMX19_04601 0.28 -1.9 985,932 + MPMX19_04601 0.28 +0.6 985,932 + MPMX19_04601 0.28 +0.5 985,933 - MPMX19_04601 0.28 -1.2 985,945 + MPMX19_04601 0.29 -0.7 985,945 + MPMX19_04601 0.29 -2.2 985,946 - MPMX19_04601 0.29 -0.8 985,946 - MPMX19_04601 0.29 +0.2 985,946 - MPMX19_04601 0.29 -1.1 985,946 - MPMX19_04601 0.29 +0.8 985,946 - MPMX19_04601 0.29 -1.4 985,946 - MPMX19_04601 0.29 +0.2 985,946 - MPMX19_04601 0.29 -1.7
Or see this region's nucleotide sequence