Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04402

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04401 and MPMX19_04402 are separated by 188 nucleotidesMPMX19_04402 and MPMX19_04403 are separated by 172 nucleotidesMPMX19_04403 and MPMX19_04404 are separated by 73 nucleotidesMPMX19_04404 and MPMX19_04405 are separated by 221 nucleotides MPMX19_04401: MPMX19_04401 - hypothetical protein, at 767,198 to 768,652 _04401 MPMX19_04402: MPMX19_04402 - Bis(5'-nucleosyl)-tetraphosphatase, symmetrical, at 768,841 to 769,539 _04402 MPMX19_04403: MPMX19_04403 - hypothetical protein, at 769,712 to 770,116 _04403 MPMX19_04404: MPMX19_04404 - tRNA-Pro, at 770,190 to 770,266 _04404 MPMX19_04405: MPMX19_04405 - tRNA-Pro, at 770,488 to 770,564 _04405 Position (kb) 768 769 770Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 768.137 kb on + strand, within MPMX19_04401at 768.137 kb on + strand, within MPMX19_04401at 768.137 kb on + strand, within MPMX19_04401at 768.137 kb on + strand, within MPMX19_04401at 768.137 kb on + strand, within MPMX19_04401at 768.137 kb on + strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.138 kb on - strand, within MPMX19_04401at 768.188 kb on + strand, within MPMX19_04401at 768.188 kb on + strand, within MPMX19_04401at 768.188 kb on + strand, within MPMX19_04401at 768.188 kb on + strand, within MPMX19_04401at 768.189 kb on - strand, within MPMX19_04401at 768.189 kb on - strand, within MPMX19_04401at 768.189 kb on - strand, within MPMX19_04401at 768.189 kb on - strand, within MPMX19_04401at 768.189 kb on - strand, within MPMX19_04401at 768.189 kb on - strand, within MPMX19_04401at 768.189 kb on - strand, within MPMX19_04401at 768.239 kb on + strand, within MPMX19_04401at 768.239 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.241 kb on + strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.242 kb on - strand, within MPMX19_04401at 768.356 kb on + strand, within MPMX19_04401at 768.357 kb on - strand, within MPMX19_04401at 768.357 kb on - strand, within MPMX19_04401at 768.357 kb on - strand, within MPMX19_04401at 768.383 kb on + strand, within MPMX19_04401at 768.384 kb on - strand, within MPMX19_04401at 768.455 kb on + strand, within MPMX19_04401at 768.456 kb on - strand, within MPMX19_04401at 768.456 kb on - strand, within MPMX19_04401at 768.722 kb on + strandat 768.722 kb on + strandat 768.722 kb on + strandat 768.722 kb on + strandat 768.722 kb on + strandat 768.722 kb on + strandat 768.722 kb on + strandat 768.722 kb on + strandat 768.723 kb on - strandat 768.723 kb on - strandat 768.723 kb on - strandat 768.723 kb on - strandat 768.732 kb on + strandat 768.733 kb on - strandat 768.733 kb on - strandat 768.850 kb on + strandat 768.850 kb on + strandat 768.851 kb on - strandat 768.946 kb on + strand, within MPMX19_04402at 768.946 kb on + strand, within MPMX19_04402at 768.946 kb on + strand, within MPMX19_04402at 768.946 kb on + strand, within MPMX19_04402at 768.947 kb on - strand, within MPMX19_04402at 768.947 kb on - strand, within MPMX19_04402at 768.947 kb on - strand, within MPMX19_04402at 768.947 kb on - strand, within MPMX19_04402at 768.947 kb on - strand, within MPMX19_04402at 768.967 kb on + strand, within MPMX19_04402at 768.967 kb on + strand, within MPMX19_04402at 768.967 kb on + strand, within MPMX19_04402at 768.967 kb on + strand, within MPMX19_04402at 768.967 kb on + strand, within MPMX19_04402at 768.968 kb on - strand, within MPMX19_04402at 768.968 kb on - strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.120 kb on + strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.121 kb on - strand, within MPMX19_04402at 769.147 kb on + strand, within MPMX19_04402at 769.147 kb on + strand, within MPMX19_04402at 769.147 kb on + strand, within MPMX19_04402at 769.147 kb on + strand, within MPMX19_04402at 769.147 kb on + strand, within MPMX19_04402at 769.147 kb on + strand, within MPMX19_04402at 769.147 kb on + strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.148 kb on - strand, within MPMX19_04402at 769.283 kb on - strand, within MPMX19_04402at 769.283 kb on - strand, within MPMX19_04402at 769.471 kb on + strandat 769.471 kb on + strandat 769.471 kb on + strandat 769.472 kb on - strandat 769.588 kb on - strandat 769.602 kb on + strandat 769.639 kb on + strandat 769.639 kb on + strandat 769.639 kb on + strandat 769.639 kb on + strandat 769.639 kb on + strandat 769.639 kb on + strandat 769.640 kb on - strandat 769.640 kb on - strandat 769.640 kb on - strandat 769.640 kb on - strandat 769.681 kb on + strandat 769.681 kb on + strandat 769.681 kb on + strandat 769.682 kb on - strandat 769.682 kb on - strandat 769.682 kb on - strandat 769.728 kb on + strandat 769.728 kb on + strandat 769.729 kb on - strandat 769.729 kb on - strandat 769.729 kb on - strandat 769.729 kb on - strandat 769.729 kb on - strandat 769.730 kb on + strandat 769.730 kb on + strandat 769.731 kb on - strandat 769.731 kb on - strandat 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.919 kb on + strand, within MPMX19_04403at 769.920 kb on - strand, within MPMX19_04403at 769.920 kb on - strand, within MPMX19_04403at 769.924 kb on + strand, within MPMX19_04403at 769.924 kb on + strand, within MPMX19_04403at 769.925 kb on - strand, within MPMX19_04403at 769.925 kb on - strand, within MPMX19_04403at 769.983 kb on - strand, within MPMX19_04403at 770.012 kb on + strand, within MPMX19_04403at 770.036 kb on + strand, within MPMX19_04403at 770.036 kb on + strand, within MPMX19_04403at 770.036 kb on + strand, within MPMX19_04403at 770.037 kb on - strand, within MPMX19_04403at 770.037 kb on - strand, within MPMX19_04403at 770.037 kb on - strand, within MPMX19_04403at 770.037 kb on - strand, within MPMX19_04403at 770.130 kb on - strandat 770.189 kb on - strandat 770.295 kb on - strandat 770.295 kb on - strandat 770.295 kb on - strandat 770.295 kb on - strandat 770.295 kb on - strandat 770.295 kb on - strandat 770.324 kb on + strandat 770.325 kb on - strandat 770.325 kb on - strandat 770.325 kb on - strandat 770.325 kb on - strandat 770.325 kb on - strandat 770.325 kb on - strandat 770.325 kb on - strandat 770.325 kb on - strandat 770.327 kb on - strandat 770.327 kb on - strandat 770.327 kb on - strandat 770.327 kb on - strandat 770.327 kb on - strandat 770.396 kb on + strandat 770.487 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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768,137 + MPMX19_04401 0.65 +0.5
768,137 + MPMX19_04401 0.65 +0.4
768,137 + MPMX19_04401 0.65 -0.2
768,137 + MPMX19_04401 0.65 -1.0
768,137 + MPMX19_04401 0.65 -1.2
768,137 + MPMX19_04401 0.65 -0.4
768,138 - MPMX19_04401 0.65 -1.3
768,138 - MPMX19_04401 0.65 -0.6
768,138 - MPMX19_04401 0.65 -1.3
768,138 - MPMX19_04401 0.65 -0.9
768,138 - MPMX19_04401 0.65 -0.2
768,138 - MPMX19_04401 0.65 +0.8
768,138 - MPMX19_04401 0.65 -1.0
768,138 - MPMX19_04401 0.65 -1.8
768,138 - MPMX19_04401 0.65 -0.4
768,188 + MPMX19_04401 0.68 -1.9
768,188 + MPMX19_04401 0.68 +0.6
768,188 + MPMX19_04401 0.68 -1.4
768,188 + MPMX19_04401 0.68 -0.0
768,189 - MPMX19_04401 0.68 -0.0
768,189 - MPMX19_04401 0.68 -0.8
768,189 - MPMX19_04401 0.68 -0.3
768,189 - MPMX19_04401 0.68 -1.5
768,189 - MPMX19_04401 0.68 +0.1
768,189 - MPMX19_04401 0.68 -1.2
768,189 - MPMX19_04401 0.68 -0.2
768,239 + MPMX19_04401 0.72 -0.6
768,239 + MPMX19_04401 0.72 -0.7
768,241 + MPMX19_04401 0.72 -1.8
768,241 + MPMX19_04401 0.72 -1.1
768,241 + MPMX19_04401 0.72 -1.0
768,241 + MPMX19_04401 0.72 -0.1
768,241 + MPMX19_04401 0.72 -1.3
768,241 + MPMX19_04401 0.72 -1.3
768,241 + MPMX19_04401 0.72 -1.1
768,241 + MPMX19_04401 0.72 -1.6
768,241 + MPMX19_04401 0.72 +1.2
768,241 + MPMX19_04401 0.72 -1.0
768,241 + MPMX19_04401 0.72 -0.4
768,241 + MPMX19_04401 0.72 -0.9
768,241 + MPMX19_04401 0.72 +0.6
768,241 + MPMX19_04401 0.72 -1.0
768,241 + MPMX19_04401 0.72 -1.8
768,241 + MPMX19_04401 0.72 -1.2
768,241 + MPMX19_04401 0.72 -0.4
768,241 + MPMX19_04401 0.72 -0.4
768,241 + MPMX19_04401 0.72 -0.5
768,241 + MPMX19_04401 0.72 -0.7
768,241 + MPMX19_04401 0.72 -0.6
768,242 - MPMX19_04401 0.72 +0.4
768,242 - MPMX19_04401 0.72 -2.0
768,242 - MPMX19_04401 0.72 -0.2
768,242 - MPMX19_04401 0.72 +1.2
768,242 - MPMX19_04401 0.72 -1.5
768,242 - MPMX19_04401 0.72 -0.8
768,242 - MPMX19_04401 0.72 -1.8
768,242 - MPMX19_04401 0.72 +0.2
768,242 - MPMX19_04401 0.72 -1.3
768,242 - MPMX19_04401 0.72 -0.9
768,242 - MPMX19_04401 0.72 -0.3
768,242 - MPMX19_04401 0.72 -2.3
768,242 - MPMX19_04401 0.72 -2.0
768,242 - MPMX19_04401 0.72 -0.6
768,242 - MPMX19_04401 0.72 -0.2
768,242 - MPMX19_04401 0.72 -1.2
768,242 - MPMX19_04401 0.72 -0.8
768,242 - MPMX19_04401 0.72 -0.8
768,242 - MPMX19_04401 0.72 -0.3
768,242 - MPMX19_04401 0.72 -2.2
768,242 - MPMX19_04401 0.72 -1.7
768,242 - MPMX19_04401 0.72 +0.6
768,356 + MPMX19_04401 0.80 -0.4
768,357 - MPMX19_04401 0.80 -0.3
768,357 - MPMX19_04401 0.80 +1.4
768,357 - MPMX19_04401 0.80 -1.4
768,383 + MPMX19_04401 0.81 -0.2
768,384 - MPMX19_04401 0.82 -1.5
768,455 + MPMX19_04401 0.86 -0.3
768,456 - MPMX19_04401 0.86 -1.8
768,456 - MPMX19_04401 0.86 +0.5
768,722 + -0.6
768,722 + -1.7
768,722 + -0.2
768,722 + -1.5
768,722 + -0.7
768,722 + -1.6
768,722 + +0.2
768,722 + +0.2
768,723 - -0.7
768,723 - -1.8
768,723 - -1.4
768,723 - -0.9
768,732 + -1.2
768,733 - -1.0
768,733 - -2.1
768,850 + -0.0
768,850 + -1.3
768,851 - +1.7
768,946 + MPMX19_04402 0.15 -0.2
768,946 + MPMX19_04402 0.15 -0.8
768,946 + MPMX19_04402 0.15 -1.3
768,946 + MPMX19_04402 0.15 -0.8
768,947 - MPMX19_04402 0.15 -0.8
768,947 - MPMX19_04402 0.15 +0.4
768,947 - MPMX19_04402 0.15 -0.4
768,947 - MPMX19_04402 0.15 -1.9
768,947 - MPMX19_04402 0.15 -0.6
768,967 + MPMX19_04402 0.18 -2.1
768,967 + MPMX19_04402 0.18 -1.2
768,967 + MPMX19_04402 0.18 -1.0
768,967 + MPMX19_04402 0.18 -0.0
768,967 + MPMX19_04402 0.18 +0.7
768,968 - MPMX19_04402 0.18 -1.3
768,968 - MPMX19_04402 0.18 -0.8
769,120 + MPMX19_04402 0.40 +0.1
769,120 + MPMX19_04402 0.40 -1.2
769,120 + MPMX19_04402 0.40 +0.2
769,120 + MPMX19_04402 0.40 -0.2
769,120 + MPMX19_04402 0.40 +0.1
769,120 + MPMX19_04402 0.40 -2.2
769,120 + MPMX19_04402 0.40 -1.8
769,120 + MPMX19_04402 0.40 -2.6
769,120 + MPMX19_04402 0.40 +1.1
769,120 + MPMX19_04402 0.40 +0.1
769,120 + MPMX19_04402 0.40 -0.8
769,120 + MPMX19_04402 0.40 -2.3
769,121 - MPMX19_04402 0.40 +1.2
769,121 - MPMX19_04402 0.40 -0.3
769,121 - MPMX19_04402 0.40 -0.6
769,121 - MPMX19_04402 0.40 +3.0
769,121 - MPMX19_04402 0.40 -2.9
769,121 - MPMX19_04402 0.40 -0.6
769,121 - MPMX19_04402 0.40 +1.7
769,121 - MPMX19_04402 0.40 -1.1
769,147 + MPMX19_04402 0.44 +0.4
769,147 + MPMX19_04402 0.44 -0.8
769,147 + MPMX19_04402 0.44 -0.6
769,147 + MPMX19_04402 0.44 -1.5
769,147 + MPMX19_04402 0.44 -0.1
769,147 + MPMX19_04402 0.44 +0.8
769,147 + MPMX19_04402 0.44 -0.9
769,148 - MPMX19_04402 0.44 -1.2
769,148 - MPMX19_04402 0.44 -2.3
769,148 - MPMX19_04402 0.44 +0.1
769,148 - MPMX19_04402 0.44 -2.4
769,148 - MPMX19_04402 0.44 -1.8
769,148 - MPMX19_04402 0.44 -1.9
769,148 - MPMX19_04402 0.44 -0.3
769,148 - MPMX19_04402 0.44 -0.6
769,148 - MPMX19_04402 0.44 +0.4
769,148 - MPMX19_04402 0.44 -0.8
769,283 - MPMX19_04402 0.63 -2.6
769,283 - MPMX19_04402 0.63 -2.0
769,471 + -0.6
769,471 + -1.4
769,471 + -2.7
769,472 - +0.1
769,588 - -0.8
769,602 + -1.2
769,639 + -0.6
769,639 + -0.5
769,639 + -1.9
769,639 + -0.5
769,639 + -0.6
769,639 + -0.6
769,640 - -0.8
769,640 - +0.1
769,640 - +1.6
769,640 - -0.0
769,681 + -1.2
769,681 + -0.8
769,681 + -0.9
769,682 - -1.5
769,682 - +0.8
769,682 - -1.4
769,728 + -0.6
769,728 + +0.4
769,729 - -0.8
769,729 - -0.9
769,729 - -0.6
769,729 - -0.5
769,729 - +0.4
769,730 + -2.0
769,730 + -2.6
769,731 - +0.9
769,731 - -1.2
769,919 + MPMX19_04403 0.51 -0.4
769,919 + MPMX19_04403 0.51 +0.4
769,919 + MPMX19_04403 0.51 +1.4
769,919 + MPMX19_04403 0.51 +0.3
769,919 + MPMX19_04403 0.51 +0.5
769,919 + MPMX19_04403 0.51 -0.2
769,919 + MPMX19_04403 0.51 -0.2
769,919 + MPMX19_04403 0.51 -1.6
769,919 + MPMX19_04403 0.51 -2.3
769,920 - MPMX19_04403 0.51 +0.5
769,920 - MPMX19_04403 0.51 +0.2
769,924 + MPMX19_04403 0.52 -0.5
769,924 + MPMX19_04403 0.52 -0.8
769,925 - MPMX19_04403 0.53 -0.4
769,925 - MPMX19_04403 0.53 +0.4
769,983 - MPMX19_04403 0.67 +0.1
770,012 + MPMX19_04403 0.74 -0.3
770,036 + MPMX19_04403 0.80 -0.0
770,036 + MPMX19_04403 0.80 -0.5
770,036 + MPMX19_04403 0.80 -2.5
770,037 - MPMX19_04403 0.80 -1.3
770,037 - MPMX19_04403 0.80 -0.0
770,037 - MPMX19_04403 0.80 -1.2
770,037 - MPMX19_04403 0.80 -0.0
770,130 - +0.6
770,189 - -1.3
770,295 - -1.8
770,295 - -1.7
770,295 - -0.8
770,295 - -0.0
770,295 - -1.6
770,295 - +0.2
770,324 + +0.4
770,325 - +0.4
770,325 - -0.6
770,325 - -0.6
770,325 - -1.3
770,325 - +1.4
770,325 - -1.5
770,325 - -0.5
770,325 - -0.4
770,327 - -0.5
770,327 - -0.8
770,327 - -0.8
770,327 - -0.9
770,327 - +1.0
770,396 + -1.4
770,487 - -0.6

Or see this region's nucleotide sequence