Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_04376

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_04375 and MPMX19_04376 overlap by 4 nucleotidesMPMX19_04376 and MPMX19_04377 are separated by 40 nucleotidesMPMX19_04377 and MPMX19_04378 are separated by 7 nucleotides MPMX19_04375: MPMX19_04375 - Hydrogen cyanide synthase subunit HcnB, at 741,968 to 743,353 _04375 MPMX19_04376: MPMX19_04376 - hypothetical protein, at 743,350 to 743,640 _04376 MPMX19_04377: MPMX19_04377 - Inner membrane ABC transporter permease protein YdcV, at 743,681 to 744,475 _04377 MPMX19_04378: MPMX19_04378 - hypothetical protein, at 744,483 to 745,388 _04378 Position (kb) 743 744Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 742.452 kb on + strand, within MPMX19_04375at 742.452 kb on + strand, within MPMX19_04375at 742.452 kb on + strand, within MPMX19_04375at 742.452 kb on + strand, within MPMX19_04375at 742.452 kb on + strand, within MPMX19_04375at 742.453 kb on - strand, within MPMX19_04375at 742.453 kb on - strand, within MPMX19_04375at 742.453 kb on - strand, within MPMX19_04375at 742.453 kb on - strand, within MPMX19_04375at 742.453 kb on - strand, within MPMX19_04375at 742.453 kb on - strand, within MPMX19_04375at 742.842 kb on + strand, within MPMX19_04375at 742.842 kb on + strand, within MPMX19_04375at 742.842 kb on + strand, within MPMX19_04375at 742.842 kb on + strand, within MPMX19_04375at 742.843 kb on - strand, within MPMX19_04375at 742.843 kb on - strand, within MPMX19_04375at 742.843 kb on - strand, within MPMX19_04375at 742.843 kb on - strand, within MPMX19_04375at 742.849 kb on - strand, within MPMX19_04375at 742.849 kb on - strand, within MPMX19_04375at 742.849 kb on - strand, within MPMX19_04375at 742.849 kb on - strand, within MPMX19_04375at 742.860 kb on + strand, within MPMX19_04375at 742.860 kb on + strand, within MPMX19_04375at 742.860 kb on + strand, within MPMX19_04375at 742.860 kb on + strand, within MPMX19_04375at 742.860 kb on + strand, within MPMX19_04375at 742.860 kb on + strand, within MPMX19_04375at 742.860 kb on + strand, within MPMX19_04375at 742.860 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 742.861 kb on - strand, within MPMX19_04375at 743.175 kb on + strand, within MPMX19_04375at 743.175 kb on + strand, within MPMX19_04375at 743.175 kb on + strand, within MPMX19_04375at 743.176 kb on - strand, within MPMX19_04375at 743.176 kb on - strand, within MPMX19_04375at 743.176 kb on - strand, within MPMX19_04375at 743.223 kb on + strandat 743.223 kb on + strandat 743.223 kb on + strandat 743.223 kb on + strandat 743.224 kb on - strandat 743.224 kb on - strandat 743.715 kb on + strandat 743.715 kb on + strandat 743.715 kb on + strandat 743.715 kb on + strandat 743.715 kb on + strandat 743.716 kb on - strandat 743.716 kb on - strandat 743.716 kb on - strandat 743.716 kb on - strandat 743.716 kb on - strandat 743.716 kb on - strandat 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.808 kb on + strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.809 kb on - strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.814 kb on + strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 743.815 kb on - strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.045 kb on + strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.046 kb on - strand, within MPMX19_04377at 744.207 kb on + strand, within MPMX19_04377at 744.208 kb on - strand, within MPMX19_04377at 744.502 kb on + strandat 744.502 kb on + strandat 744.526 kb on + strandat 744.526 kb on + strandat 744.526 kb on + strandat 744.526 kb on + strandat 744.526 kb on + strandat 744.526 kb on + strandat 744.526 kb on + strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.527 kb on - strandat 744.607 kb on + strand, within MPMX19_04378at 744.607 kb on + strand, within MPMX19_04378at 744.607 kb on + strand, within MPMX19_04378at 744.608 kb on - strand, within MPMX19_04378at 744.608 kb on - strand, within MPMX19_04378at 744.608 kb on - strand, within MPMX19_04378at 744.616 kb on + strand, within MPMX19_04378at 744.616 kb on + strand, within MPMX19_04378at 744.616 kb on + strand, within MPMX19_04378at 744.616 kb on + strand, within MPMX19_04378at 744.617 kb on - strand, within MPMX19_04378at 744.617 kb on - strand, within MPMX19_04378at 744.617 kb on - strand, within MPMX19_04378at 744.617 kb on - strand, within MPMX19_04378at 744.617 kb on - strand, within MPMX19_04378

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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742,452 + MPMX19_04375 0.35 +0.4
742,452 + MPMX19_04375 0.35 -2.4
742,452 + MPMX19_04375 0.35 -1.2
742,452 + MPMX19_04375 0.35 -1.3
742,452 + MPMX19_04375 0.35 +0.6
742,453 - MPMX19_04375 0.35 -1.8
742,453 - MPMX19_04375 0.35 -2.0
742,453 - MPMX19_04375 0.35 -0.5
742,453 - MPMX19_04375 0.35 -0.4
742,453 - MPMX19_04375 0.35 +0.7
742,453 - MPMX19_04375 0.35 -0.4
742,842 + MPMX19_04375 0.63 -0.6
742,842 + MPMX19_04375 0.63 -0.9
742,842 + MPMX19_04375 0.63 -1.2
742,842 + MPMX19_04375 0.63 -0.6
742,843 - MPMX19_04375 0.63 -2.2
742,843 - MPMX19_04375 0.63 +1.0
742,843 - MPMX19_04375 0.63 +1.7
742,843 - MPMX19_04375 0.63 -0.4
742,849 - MPMX19_04375 0.64 -0.2
742,849 - MPMX19_04375 0.64 -1.5
742,849 - MPMX19_04375 0.64 +0.6
742,849 - MPMX19_04375 0.64 -0.6
742,860 + MPMX19_04375 0.64 -1.5
742,860 + MPMX19_04375 0.64 +0.2
742,860 + MPMX19_04375 0.64 -0.2
742,860 + MPMX19_04375 0.64 -0.2
742,860 + MPMX19_04375 0.64 -1.6
742,860 + MPMX19_04375 0.64 -0.9
742,860 + MPMX19_04375 0.64 -0.8
742,860 - MPMX19_04375 0.64 -0.8
742,861 - MPMX19_04375 0.64 -0.4
742,861 - MPMX19_04375 0.64 -2.6
742,861 - MPMX19_04375 0.64 -1.4
742,861 - MPMX19_04375 0.64 -0.0
742,861 - MPMX19_04375 0.64 +1.2
742,861 - MPMX19_04375 0.64 -0.0
742,861 - MPMX19_04375 0.64 +0.8
742,861 - MPMX19_04375 0.64 +0.8
742,861 - MPMX19_04375 0.64 -0.4
742,861 - MPMX19_04375 0.64 +0.8
742,861 - MPMX19_04375 0.64 -1.9
742,861 - MPMX19_04375 0.64 -0.0
742,861 - MPMX19_04375 0.64 -1.9
743,175 + MPMX19_04375 0.87 -0.4
743,175 + MPMX19_04375 0.87 -0.3
743,175 + MPMX19_04375 0.87 +0.6
743,176 - MPMX19_04375 0.87 +0.2
743,176 - MPMX19_04375 0.87 -0.1
743,176 - MPMX19_04375 0.87 -1.3
743,223 + -1.5
743,223 + +1.4
743,223 + -0.5
743,223 + +0.2
743,224 - +1.2
743,224 - -1.5
743,715 + -0.6
743,715 + -1.4
743,715 + -0.6
743,715 + +0.2
743,715 + -1.3
743,716 - -0.4
743,716 - +0.4
743,716 - +0.1
743,716 - -1.8
743,716 - -0.2
743,716 - -1.2
743,808 + MPMX19_04377 0.16 +1.6
743,808 + MPMX19_04377 0.16 -0.4
743,808 + MPMX19_04377 0.16 -1.4
743,808 + MPMX19_04377 0.16 -0.4
743,808 + MPMX19_04377 0.16 +1.4
743,808 + MPMX19_04377 0.16 -0.4
743,808 + MPMX19_04377 0.16 +0.1
743,808 + MPMX19_04377 0.16 +1.4
743,808 + MPMX19_04377 0.16 +0.8
743,808 + MPMX19_04377 0.16 -1.2
743,808 + MPMX19_04377 0.16 -1.2
743,808 + MPMX19_04377 0.16 -1.7
743,808 + MPMX19_04377 0.16 -0.6
743,808 + MPMX19_04377 0.16 -0.4
743,808 + MPMX19_04377 0.16 -1.5
743,808 + MPMX19_04377 0.16 +0.6
743,808 + MPMX19_04377 0.16 +0.0
743,808 + MPMX19_04377 0.16 -1.5
743,808 + MPMX19_04377 0.16 -0.2
743,808 + MPMX19_04377 0.16 -1.0
743,808 + MPMX19_04377 0.16 +0.3
743,808 + MPMX19_04377 0.16 +0.1
743,808 + MPMX19_04377 0.16 +0.1
743,808 + MPMX19_04377 0.16 -1.5
743,808 + MPMX19_04377 0.16 -1.2
743,808 + MPMX19_04377 0.16 -0.0
743,809 - MPMX19_04377 0.16 -0.4
743,809 - MPMX19_04377 0.16 -2.1
743,809 - MPMX19_04377 0.16 -1.0
743,809 - MPMX19_04377 0.16 +1.1
743,809 - MPMX19_04377 0.16 -2.0
743,809 - MPMX19_04377 0.16 -1.7
743,809 - MPMX19_04377 0.16 -0.8
743,809 - MPMX19_04377 0.16 -0.2
743,809 - MPMX19_04377 0.16 +1.4
743,809 - MPMX19_04377 0.16 -1.0
743,809 - MPMX19_04377 0.16 -0.5
743,809 - MPMX19_04377 0.16 +0.8
743,809 - MPMX19_04377 0.16 -0.3
743,809 - MPMX19_04377 0.16 -0.1
743,809 - MPMX19_04377 0.16 -0.2
743,809 - MPMX19_04377 0.16 -0.2
743,809 - MPMX19_04377 0.16 -0.6
743,809 - MPMX19_04377 0.16 -0.8
743,809 - MPMX19_04377 0.16 -0.5
743,814 + MPMX19_04377 0.17 -0.2
743,814 + MPMX19_04377 0.17 -1.2
743,814 + MPMX19_04377 0.17 +0.1
743,814 + MPMX19_04377 0.17 -0.6
743,814 + MPMX19_04377 0.17 -1.2
743,814 + MPMX19_04377 0.17 -0.6
743,814 + MPMX19_04377 0.17 -1.5
743,814 + MPMX19_04377 0.17 -1.0
743,814 + MPMX19_04377 0.17 -0.0
743,814 + MPMX19_04377 0.17 -0.4
743,814 + MPMX19_04377 0.17 -1.2
743,814 + MPMX19_04377 0.17 -1.4
743,814 + MPMX19_04377 0.17 -1.6
743,814 + MPMX19_04377 0.17 -0.8
743,814 + MPMX19_04377 0.17 -1.0
743,814 + MPMX19_04377 0.17 -1.9
743,814 + MPMX19_04377 0.17 -0.4
743,814 + MPMX19_04377 0.17 -1.9
743,814 + MPMX19_04377 0.17 -1.4
743,814 + MPMX19_04377 0.17 -1.5
743,814 + MPMX19_04377 0.17 -0.0
743,814 + MPMX19_04377 0.17 -0.4
743,814 + MPMX19_04377 0.17 +0.4
743,814 + MPMX19_04377 0.17 -0.0
743,814 + MPMX19_04377 0.17 +2.4
743,814 + MPMX19_04377 0.17 +0.2
743,815 - MPMX19_04377 0.17 +0.8
743,815 - MPMX19_04377 0.17 -2.7
743,815 - MPMX19_04377 0.17 -1.0
743,815 - MPMX19_04377 0.17 +0.1
743,815 - MPMX19_04377 0.17 -0.2
743,815 - MPMX19_04377 0.17 -0.6
743,815 - MPMX19_04377 0.17 +0.1
743,815 - MPMX19_04377 0.17 +0.1
743,815 - MPMX19_04377 0.17 -1.3
743,815 - MPMX19_04377 0.17 -2.0
743,815 - MPMX19_04377 0.17 +0.1
743,815 - MPMX19_04377 0.17 +0.1
743,815 - MPMX19_04377 0.17 -1.8
743,815 - MPMX19_04377 0.17 -0.2
743,815 - MPMX19_04377 0.17 -0.4
743,815 - MPMX19_04377 0.17 -0.6
743,815 - MPMX19_04377 0.17 -1.0
743,815 - MPMX19_04377 0.17 -0.8
743,815 - MPMX19_04377 0.17 -1.3
743,815 - MPMX19_04377 0.17 +1.0
743,815 - MPMX19_04377 0.17 +0.1
743,815 - MPMX19_04377 0.17 +0.1
743,815 - MPMX19_04377 0.17 -1.3
743,815 - MPMX19_04377 0.17 -0.8
743,815 - MPMX19_04377 0.17 -1.2
743,815 - MPMX19_04377 0.17 -0.9
743,815 - MPMX19_04377 0.17 -1.5
743,815 - MPMX19_04377 0.17 -1.0
743,815 - MPMX19_04377 0.17 +0.5
743,815 - MPMX19_04377 0.17 -0.7
743,815 - MPMX19_04377 0.17 -1.3
744,045 + MPMX19_04377 0.46 -0.4
744,045 + MPMX19_04377 0.46 -0.0
744,045 + MPMX19_04377 0.46 +1.4
744,045 + MPMX19_04377 0.46 -0.4
744,045 + MPMX19_04377 0.46 -2.4
744,045 + MPMX19_04377 0.46 -0.4
744,045 + MPMX19_04377 0.46 -0.1
744,045 + MPMX19_04377 0.46 +0.1
744,045 + MPMX19_04377 0.46 -1.0
744,045 + MPMX19_04377 0.46 -0.2
744,045 + MPMX19_04377 0.46 +0.1
744,046 - MPMX19_04377 0.46 -1.0
744,046 - MPMX19_04377 0.46 -0.3
744,046 - MPMX19_04377 0.46 +0.8
744,046 - MPMX19_04377 0.46 +0.1
744,046 - MPMX19_04377 0.46 +0.7
744,046 - MPMX19_04377 0.46 +0.8
744,046 - MPMX19_04377 0.46 -0.0
744,046 - MPMX19_04377 0.46 -1.8
744,046 - MPMX19_04377 0.46 +0.1
744,207 + MPMX19_04377 0.66 +0.1
744,208 - MPMX19_04377 0.66 -2.1
744,502 + +0.1
744,502 + -0.6
744,526 + -1.3
744,526 + +1.0
744,526 + -1.4
744,526 + -1.2
744,526 + -0.7
744,526 + +0.8
744,526 + -0.8
744,527 - -0.8
744,527 - -1.7
744,527 - -0.5
744,527 - -0.2
744,527 - -0.2
744,527 - +0.1
744,527 - -0.3
744,527 - +0.4
744,527 - +1.0
744,527 - -0.8
744,527 - -0.8
744,527 - +0.5
744,527 - -1.4
744,527 - +1.0
744,527 - -0.3
744,607 + MPMX19_04378 0.14 -2.1
744,607 + MPMX19_04378 0.14 -0.7
744,607 + MPMX19_04378 0.14 -0.4
744,608 - MPMX19_04378 0.14 -0.0
744,608 - MPMX19_04378 0.14 +0.4
744,608 - MPMX19_04378 0.14 +0.8
744,616 + MPMX19_04378 0.15 -0.2
744,616 + MPMX19_04378 0.15 +0.4
744,616 + MPMX19_04378 0.15 +0.4
744,616 + MPMX19_04378 0.15 -1.4
744,617 - MPMX19_04378 0.15 +2.4
744,617 - MPMX19_04378 0.15 -0.9
744,617 - MPMX19_04378 0.15 -2.8
744,617 - MPMX19_04378 0.15 -0.5
744,617 - MPMX19_04378 0.15 +0.0

Or see this region's nucleotide sequence