Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_03371

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_03369 and MPMX19_03370 overlap by 4 nucleotidesMPMX19_03370 and MPMX19_03371 are separated by 2 nucleotidesMPMX19_03371 and MPMX19_03372 are separated by 14 nucleotides MPMX19_03369: MPMX19_03369 - hypothetical protein, at 745,277 to 746,047 _03369 MPMX19_03370: MPMX19_03370 - hypothetical protein, at 746,044 to 746,520 _03370 MPMX19_03371: MPMX19_03371 - hypothetical protein, at 746,523 to 746,906 _03371 MPMX19_03372: MPMX19_03372 - hypothetical protein, at 746,921 to 750,010 _03372 Position (kb) 746 747Strain fitness (log2 ratio) -2 -1 0 1at 745.608 kb on + strand, within MPMX19_03369at 745.609 kb on - strand, within MPMX19_03369at 746.039 kb on + strandat 746.040 kb on - strandat 746.040 kb on - strandat 746.551 kb on + strandat 746.551 kb on + strandat 746.552 kb on - strandat 746.552 kb on - strandat 746.552 kb on - strandat 746.573 kb on - strand, within MPMX19_03371at 746.737 kb on + strand, within MPMX19_03371at 746.737 kb on + strand, within MPMX19_03371at 746.737 kb on + strand, within MPMX19_03371at 746.737 kb on + strand, within MPMX19_03371at 746.738 kb on - strand, within MPMX19_03371at 746.738 kb on - strand, within MPMX19_03371at 746.738 kb on - strand, within MPMX19_03371at 746.738 kb on - strand, within MPMX19_03371at 746.776 kb on + strand, within MPMX19_03371at 746.776 kb on + strand, within MPMX19_03371at 746.777 kb on - strand, within MPMX19_03371at 746.777 kb on - strand, within MPMX19_03371at 746.777 kb on - strand, within MPMX19_03371at 747.034 kb on - strandat 747.105 kb on + strandat 747.105 kb on + strandat 747.105 kb on + strandat 747.105 kb on + strandat 747.105 kb on + strandat 747.106 kb on - strandat 747.106 kb on - strandat 747.106 kb on - strandat 747.106 kb on - strandat 747.147 kb on + strandat 747.147 kb on + strandat 747.148 kb on - strandat 747.261 kb on + strand, within MPMX19_03372at 747.261 kb on + strand, within MPMX19_03372at 747.261 kb on + strand, within MPMX19_03372

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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745,608 + MPMX19_03369 0.43 -0.0
745,609 - MPMX19_03369 0.43 -0.8
746,039 + -0.0
746,040 - -0.2
746,040 - -0.9
746,551 + -0.3
746,551 + -0.9
746,552 - -0.4
746,552 - -1.4
746,552 - -1.3
746,573 - MPMX19_03371 0.13 -1.5
746,737 + MPMX19_03371 0.56 -0.6
746,737 + MPMX19_03371 0.56 -0.8
746,737 + MPMX19_03371 0.56 -0.8
746,737 + MPMX19_03371 0.56 -2.2
746,738 - MPMX19_03371 0.56 -0.6
746,738 - MPMX19_03371 0.56 -1.7
746,738 - MPMX19_03371 0.56 -1.4
746,738 - MPMX19_03371 0.56 +0.1
746,776 + MPMX19_03371 0.66 -0.4
746,776 + MPMX19_03371 0.66 +0.6
746,777 - MPMX19_03371 0.66 -1.6
746,777 - MPMX19_03371 0.66 -1.6
746,777 - MPMX19_03371 0.66 -2.2
747,034 - -0.8
747,105 + +0.4
747,105 + +1.2
747,105 + -0.2
747,105 + -1.0
747,105 + -1.9
747,106 - -0.4
747,106 - +0.4
747,106 - -0.6
747,106 - +0.2
747,147 + -0.4
747,147 + +0.4
747,148 - -1.2
747,261 + MPMX19_03372 0.11 -1.0
747,261 + MPMX19_03372 0.11 -1.6
747,261 + MPMX19_03372 0.11 -0.2

Or see this region's nucleotide sequence