Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03290 and MPMX19_03291 are separated by 41 nucleotides MPMX19_03291 and MPMX19_03292 are separated by 114 nucleotides MPMX19_03292 and MPMX19_03293 are separated by 43 nucleotides
MPMX19_03290: MPMX19_03290 - hypothetical protein, at 637,734 to 638,378
_03290
MPMX19_03291: MPMX19_03291 - hypothetical protein, at 638,420 to 639,148
_03291
MPMX19_03292: MPMX19_03292 - hypothetical protein, at 639,263 to 639,808
_03292
MPMX19_03293: MPMX19_03293 - Taurine--pyruvate aminotransferase, at 639,852 to 641,168
_03293
Position (kb) 639
640 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 638.376 kb on + strand at 638.376 kb on + strand at 638.376 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.491 kb on + strand at 638.492 kb on - strand at 638.492 kb on - strand at 638.492 kb on - strand at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.669 kb on + strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.670 kb on - strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.675 kb on + strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.676 kb on - strand, within MPMX19_03291 at 638.781 kb on - strand, within MPMX19_03291 at 638.942 kb on + strand, within MPMX19_03291 at 638.942 kb on + strand, within MPMX19_03291 at 639.146 kb on + strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.147 kb on - strand at 639.254 kb on + strand at 639.254 kb on + strand at 639.254 kb on + strand at 639.254 kb on + strand at 639.255 kb on - strand at 639.497 kb on + strand, within MPMX19_03292 at 639.736 kb on + strand, within MPMX19_03292 at 639.736 kb on + strand, within MPMX19_03292 at 639.737 kb on - strand, within MPMX19_03292 at 639.743 kb on + strand, within MPMX19_03292 at 639.743 kb on + strand, within MPMX19_03292 at 639.744 kb on - strand, within MPMX19_03292 at 640.246 kb on + strand, within MPMX19_03293 at 640.246 kb on + strand, within MPMX19_03293 at 640.247 kb on - strand, within MPMX19_03293 at 640.247 kb on - strand, within MPMX19_03293 at 640.410 kb on + strand, within MPMX19_03293 at 640.411 kb on - strand, within MPMX19_03293 at 640.411 kb on - strand, within MPMX19_03293 at 640.411 kb on - strand, within MPMX19_03293 at 640.621 kb on + strand, within MPMX19_03293 at 640.622 kb on - strand, within MPMX19_03293 at 640.721 kb on - strand, within MPMX19_03293 at 640.721 kb on - strand, within MPMX19_03293 at 640.721 kb on - strand, within MPMX19_03293 at 640.721 kb on - strand, within MPMX19_03293 at 640.721 kb on - strand, within MPMX19_03293
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 638,376 + -1.2 638,376 + -1.5 638,376 + -1.7 638,491 + +2.0 638,491 + -0.3 638,491 + +0.8 638,491 + -1.0 638,491 + -2.5 638,491 + -0.4 638,491 + +0.3 638,491 + -0.7 638,491 + -1.7 638,492 - +0.7 638,492 - -0.7 638,492 - -1.4 638,669 + MPMX19_03291 0.34 -1.2 638,669 + MPMX19_03291 0.34 -1.3 638,669 + MPMX19_03291 0.34 -0.2 638,669 + MPMX19_03291 0.34 +0.1 638,669 + MPMX19_03291 0.34 -0.5 638,669 + MPMX19_03291 0.34 -1.3 638,669 + MPMX19_03291 0.34 +0.8 638,669 + MPMX19_03291 0.34 +0.4 638,670 - MPMX19_03291 0.34 -1.3 638,670 - MPMX19_03291 0.34 -0.6 638,670 - MPMX19_03291 0.34 -0.3 638,670 - MPMX19_03291 0.34 +0.3 638,670 - MPMX19_03291 0.34 -1.8 638,675 + MPMX19_03291 0.35 -0.3 638,675 + MPMX19_03291 0.35 -0.7 638,675 + MPMX19_03291 0.35 -0.6 638,675 + MPMX19_03291 0.35 -0.9 638,675 + MPMX19_03291 0.35 -1.2 638,675 + MPMX19_03291 0.35 -1.0 638,675 + MPMX19_03291 0.35 -1.3 638,675 + MPMX19_03291 0.35 -0.6 638,676 - MPMX19_03291 0.35 -2.1 638,676 - MPMX19_03291 0.35 -0.7 638,676 - MPMX19_03291 0.35 -0.4 638,676 - MPMX19_03291 0.35 -0.4 638,676 - MPMX19_03291 0.35 -0.2 638,676 - MPMX19_03291 0.35 +0.4 638,676 - MPMX19_03291 0.35 -2.2 638,676 - MPMX19_03291 0.35 -1.3 638,781 - MPMX19_03291 0.50 -1.2 638,942 + MPMX19_03291 0.72 -0.5 638,942 + MPMX19_03291 0.72 -1.2 639,146 + -2.8 639,147 - +0.4 639,147 - +0.4 639,147 - -2.9 639,147 - -1.4 639,147 - -0.0 639,147 - -1.4 639,147 - +0.4 639,254 + -1.2 639,254 + -0.0 639,254 + -0.5 639,254 + +0.7 639,255 - -1.9 639,497 + MPMX19_03292 0.43 -0.6 639,736 + MPMX19_03292 0.87 -1.2 639,736 + MPMX19_03292 0.87 -1.9 639,737 - MPMX19_03292 0.87 -0.3 639,743 + MPMX19_03292 0.88 -0.5 639,743 + MPMX19_03292 0.88 -2.2 639,744 - MPMX19_03292 0.88 -1.4 640,246 + MPMX19_03293 0.30 -0.8 640,246 + MPMX19_03293 0.30 -1.6 640,247 - MPMX19_03293 0.30 -1.5 640,247 - MPMX19_03293 0.30 -1.2 640,410 + MPMX19_03293 0.42 -1.0 640,411 - MPMX19_03293 0.42 -0.7 640,411 - MPMX19_03293 0.42 -0.3 640,411 - MPMX19_03293 0.42 -0.9 640,621 + MPMX19_03293 0.58 +0.4 640,622 - MPMX19_03293 0.58 -0.4 640,721 - MPMX19_03293 0.66 -1.4 640,721 - MPMX19_03293 0.66 -0.6 640,721 - MPMX19_03293 0.66 -0.6 640,721 - MPMX19_03293 0.66 +0.3 640,721 - MPMX19_03293 0.66 +0.6
Or see this region's nucleotide sequence