Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_03168 and MPMX19_03169 are separated by 89 nucleotides MPMX19_03169 and MPMX19_03170 are separated by 28 nucleotides MPMX19_03170 and MPMX19_03171 are separated by 7 nucleotides MPMX19_03171 and MPMX19_03172 are separated by 133 nucleotides
MPMX19_03168: MPMX19_03168 - hypothetical protein, at 463,225 to 463,863
_03168
MPMX19_03169: MPMX19_03169 - Dihydroanticapsin 7-dehydrogenase, at 463,953 to 464,732
_03169
MPMX19_03170: MPMX19_03170 - L-lactate transporter, at 464,761 to 466,041
_03170
MPMX19_03171: MPMX19_03171 - Leucine-responsive regulatory protein, at 466,049 to 466,531
_03171
MPMX19_03172: MPMX19_03172 - Pyruvate dehydrogenase E1 component, at 466,665 to 469,076
_03172
Position (kb) 464
465
466
467 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 463.931 kb on + strand at 463.931 kb on + strand at 463.932 kb on - strand at 463.932 kb on - strand at 464.439 kb on + strand, within MPMX19_03169 at 464.439 kb on + strand, within MPMX19_03169 at 464.440 kb on - strand, within MPMX19_03169 at 464.440 kb on - strand, within MPMX19_03169 at 464.440 kb on - strand, within MPMX19_03169 at 464.730 kb on + strand at 464.730 kb on + strand at 464.730 kb on + strand at 464.730 kb on + strand at 464.731 kb on - strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.809 kb on + strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.810 kb on - strand at 464.832 kb on + strand at 464.833 kb on - strand at 465.156 kb on + strand, within MPMX19_03170 at 465.274 kb on + strand, within MPMX19_03170 at 465.274 kb on + strand, within MPMX19_03170 at 465.274 kb on + strand, within MPMX19_03170 at 465.274 kb on + strand, within MPMX19_03170 at 465.274 kb on + strand, within MPMX19_03170 at 465.274 kb on + strand, within MPMX19_03170 at 465.274 kb on + strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.275 kb on - strand, within MPMX19_03170 at 465.661 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.688 kb on + strand, within MPMX19_03170 at 465.689 kb on - strand, within MPMX19_03170 at 465.689 kb on - strand, within MPMX19_03170 at 465.689 kb on - strand, within MPMX19_03170 at 465.689 kb on - strand, within MPMX19_03170 at 465.689 kb on - strand, within MPMX19_03170 at 465.689 kb on - strand, within MPMX19_03170 at 465.691 kb on + strand, within MPMX19_03170 at 465.691 kb on + strand, within MPMX19_03170 at 465.691 kb on + strand, within MPMX19_03170 at 465.692 kb on - strand, within MPMX19_03170 at 465.692 kb on - strand, within MPMX19_03170 at 465.718 kb on + strand, within MPMX19_03170 at 465.718 kb on + strand, within MPMX19_03170 at 465.718 kb on + strand, within MPMX19_03170 at 465.718 kb on + strand, within MPMX19_03170 at 465.718 kb on + strand, within MPMX19_03170 at 465.718 kb on + strand, within MPMX19_03170 at 465.718 kb on + strand, within MPMX19_03170 at 465.719 kb on - strand, within MPMX19_03170 at 465.719 kb on - strand, within MPMX19_03170 at 465.719 kb on - strand, within MPMX19_03170 at 465.719 kb on - strand, within MPMX19_03170 at 465.719 kb on - strand, within MPMX19_03170 at 465.719 kb on - strand, within MPMX19_03170 at 465.727 kb on + strand, within MPMX19_03170 at 465.727 kb on + strand, within MPMX19_03170 at 465.727 kb on + strand, within MPMX19_03170 at 465.728 kb on - strand, within MPMX19_03170 at 465.745 kb on + strand, within MPMX19_03170 at 465.745 kb on + strand, within MPMX19_03170 at 465.745 kb on + strand, within MPMX19_03170 at 465.745 kb on + strand, within MPMX19_03170 at 465.745 kb on + strand, within MPMX19_03170 at 465.745 kb on + strand, within MPMX19_03170 at 465.746 kb on - strand, within MPMX19_03170 at 465.746 kb on - strand, within MPMX19_03170 at 465.746 kb on - strand, within MPMX19_03170 at 465.746 kb on - strand, within MPMX19_03170 at 465.772 kb on + strand, within MPMX19_03170 at 465.772 kb on + strand, within MPMX19_03170 at 465.772 kb on + strand, within MPMX19_03170 at 465.772 kb on + strand, within MPMX19_03170 at 465.772 kb on + strand, within MPMX19_03170 at 465.772 kb on + strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.773 kb on - strand, within MPMX19_03170 at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.940 kb on + strand at 465.941 kb on - strand at 465.941 kb on - strand at 465.941 kb on - strand at 465.941 kb on - strand at 465.941 kb on - strand at 465.941 kb on - strand at 465.941 kb on - strand at 465.941 kb on - strand at 465.941 kb on - strand at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.170 kb on + strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.171 kb on - strand, within MPMX19_03171 at 466.206 kb on + strand, within MPMX19_03171 at 466.206 kb on + strand, within MPMX19_03171 at 466.206 kb on + strand, within MPMX19_03171 at 466.207 kb on - strand, within MPMX19_03171 at 466.207 kb on - strand, within MPMX19_03171 at 466.230 kb on + strand, within MPMX19_03171 at 466.230 kb on + strand, within MPMX19_03171 at 466.230 kb on + strand, within MPMX19_03171 at 466.230 kb on + strand, within MPMX19_03171 at 466.230 kb on + strand, within MPMX19_03171 at 466.230 kb on + strand, within MPMX19_03171 at 466.230 kb on + strand, within MPMX19_03171 at 466.231 kb on - strand, within MPMX19_03171 at 466.231 kb on - strand, within MPMX19_03171 at 466.231 kb on - strand, within MPMX19_03171 at 466.231 kb on - strand, within MPMX19_03171 at 466.368 kb on + strand, within MPMX19_03171 at 466.368 kb on + strand, within MPMX19_03171 at 466.368 kb on + strand, within MPMX19_03171 at 466.369 kb on - strand, within MPMX19_03171 at 466.369 kb on - strand, within MPMX19_03171 at 466.369 kb on - strand, within MPMX19_03171 at 466.369 kb on - strand, within MPMX19_03171 at 466.369 kb on - strand, within MPMX19_03171 at 466.369 kb on - strand, within MPMX19_03171 at 466.551 kb on + strand at 466.552 kb on - strand at 466.569 kb on + strand at 466.569 kb on + strand at 466.570 kb on - strand at 466.570 kb on - strand at 466.640 kb on + strand at 466.640 kb on + strand at 466.640 kb on + strand at 466.641 kb on - strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.726 kb on + strand at 466.727 kb on - strand at 466.727 kb on - strand at 466.727 kb on - strand at 466.727 kb on - strand at 466.848 kb on + strand at 466.848 kb on + strand at 466.848 kb on + strand at 466.848 kb on + strand at 466.848 kb on + strand at 466.849 kb on - strand at 466.849 kb on - strand at 466.849 kb on - strand at 466.849 kb on - strand at 466.849 kb on - strand at 466.849 kb on - strand at 466.923 kb on + strand, within MPMX19_03172 at 466.923 kb on + strand, within MPMX19_03172 at 466.923 kb on + strand, within MPMX19_03172 at 466.923 kb on + strand, within MPMX19_03172 at 466.923 kb on + strand, within MPMX19_03172 at 466.924 kb on - strand, within MPMX19_03172 at 466.924 kb on - strand, within MPMX19_03172 at 466.971 kb on + strand, within MPMX19_03172 at 466.971 kb on + strand, within MPMX19_03172 at 466.971 kb on + strand, within MPMX19_03172 at 466.971 kb on + strand, within MPMX19_03172 at 466.972 kb on - strand, within MPMX19_03172 at 466.972 kb on - strand, within MPMX19_03172 at 466.972 kb on - strand, within MPMX19_03172 at 466.972 kb on - strand, within MPMX19_03172 at 466.972 kb on - strand, within MPMX19_03172 at 466.972 kb on - strand, within MPMX19_03172 at 466.989 kb on + strand, within MPMX19_03172 at 466.990 kb on - strand, within MPMX19_03172
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 463,931 + -1.3 463,931 + +1.1 463,932 - -1.2 463,932 - +0.3 464,439 + MPMX19_03169 0.62 -1.4 464,439 + MPMX19_03169 0.62 +0.2 464,440 - MPMX19_03169 0.62 -1.9 464,440 - MPMX19_03169 0.62 -0.1 464,440 - MPMX19_03169 0.62 +0.3 464,730 + +1.1 464,730 + -0.7 464,730 + -1.3 464,730 + -0.9 464,731 - -0.4 464,809 + -2.5 464,809 + -0.9 464,809 + -0.6 464,809 + -0.1 464,809 + +0.1 464,809 + -1.4 464,809 + -1.4 464,809 + -0.7 464,809 + +0.7 464,809 + -0.6 464,809 + +0.1 464,809 + -1.3 464,809 + -0.1 464,810 - -0.9 464,810 - -0.9 464,810 - -0.7 464,810 - -0.3 464,810 - -0.4 464,810 - -1.6 464,810 - +0.7 464,810 - -1.1 464,810 - -1.4 464,810 - +0.2 464,810 - +1.5 464,810 - -1.2 464,810 - -1.1 464,810 - -0.6 464,832 + -0.5 464,833 - -1.2 465,156 + MPMX19_03170 0.31 -0.3 465,274 + MPMX19_03170 0.40 -1.0 465,274 + MPMX19_03170 0.40 -1.1 465,274 + MPMX19_03170 0.40 -0.5 465,274 + MPMX19_03170 0.40 +0.3 465,274 + MPMX19_03170 0.40 +2.5 465,274 + MPMX19_03170 0.40 +0.9 465,274 + MPMX19_03170 0.40 -1.9 465,275 - MPMX19_03170 0.40 -1.3 465,275 - MPMX19_03170 0.40 -2.0 465,275 - MPMX19_03170 0.40 -0.1 465,275 - MPMX19_03170 0.40 -0.3 465,275 - MPMX19_03170 0.40 +0.6 465,275 - MPMX19_03170 0.40 -1.2 465,275 - MPMX19_03170 0.40 -0.7 465,275 - MPMX19_03170 0.40 +0.7 465,275 - MPMX19_03170 0.40 -1.9 465,275 - MPMX19_03170 0.40 -0.7 465,275 - MPMX19_03170 0.40 +0.5 465,275 - MPMX19_03170 0.40 -0.2 465,275 - MPMX19_03170 0.40 +1.5 465,275 - MPMX19_03170 0.40 +0.9 465,275 - MPMX19_03170 0.40 -1.1 465,661 + MPMX19_03170 0.70 +0.6 465,688 + MPMX19_03170 0.72 +0.9 465,688 + MPMX19_03170 0.72 +0.0 465,688 + MPMX19_03170 0.72 -0.2 465,688 + MPMX19_03170 0.72 -1.5 465,688 + MPMX19_03170 0.72 +0.2 465,688 + MPMX19_03170 0.72 +0.7 465,688 + MPMX19_03170 0.72 -0.2 465,688 + MPMX19_03170 0.72 -0.8 465,689 - MPMX19_03170 0.72 -0.7 465,689 - MPMX19_03170 0.72 +0.9 465,689 - MPMX19_03170 0.72 -1.4 465,689 - MPMX19_03170 0.72 -1.2 465,689 - MPMX19_03170 0.72 -0.3 465,689 - MPMX19_03170 0.72 -0.1 465,691 + MPMX19_03170 0.73 -0.9 465,691 + MPMX19_03170 0.73 +1.5 465,691 + MPMX19_03170 0.73 +2.1 465,692 - MPMX19_03170 0.73 -1.0 465,692 - MPMX19_03170 0.73 +0.1 465,718 + MPMX19_03170 0.75 -0.2 465,718 + MPMX19_03170 0.75 -1.7 465,718 + MPMX19_03170 0.75 -1.7 465,718 + MPMX19_03170 0.75 -0.1 465,718 + MPMX19_03170 0.75 -0.1 465,718 + MPMX19_03170 0.75 -1.4 465,718 + MPMX19_03170 0.75 -1.6 465,719 - MPMX19_03170 0.75 -2.0 465,719 - MPMX19_03170 0.75 -0.1 465,719 - MPMX19_03170 0.75 +0.1 465,719 - MPMX19_03170 0.75 -0.7 465,719 - MPMX19_03170 0.75 -0.7 465,719 - MPMX19_03170 0.75 -0.5 465,727 + MPMX19_03170 0.75 -1.4 465,727 + MPMX19_03170 0.75 -1.2 465,727 + MPMX19_03170 0.75 -0.9 465,728 - MPMX19_03170 0.75 +0.6 465,745 + MPMX19_03170 0.77 -0.3 465,745 + MPMX19_03170 0.77 -1.2 465,745 + MPMX19_03170 0.77 -0.1 465,745 + MPMX19_03170 0.77 -1.1 465,745 + MPMX19_03170 0.77 -1.2 465,745 + MPMX19_03170 0.77 -0.4 465,746 - MPMX19_03170 0.77 -2.2 465,746 - MPMX19_03170 0.77 +0.5 465,746 - MPMX19_03170 0.77 -1.6 465,746 - MPMX19_03170 0.77 -0.5 465,772 + MPMX19_03170 0.79 -2.7 465,772 + MPMX19_03170 0.79 +0.1 465,772 + MPMX19_03170 0.79 -0.1 465,772 + MPMX19_03170 0.79 +0.8 465,772 + MPMX19_03170 0.79 -2.2 465,772 + MPMX19_03170 0.79 +0.9 465,773 - MPMX19_03170 0.79 -0.1 465,773 - MPMX19_03170 0.79 +0.0 465,773 - MPMX19_03170 0.79 -0.9 465,773 - MPMX19_03170 0.79 -1.5 465,773 - MPMX19_03170 0.79 +0.7 465,773 - MPMX19_03170 0.79 -0.5 465,773 - MPMX19_03170 0.79 +0.1 465,773 - MPMX19_03170 0.79 -0.8 465,940 + +0.9 465,940 + -1.2 465,940 + -0.1 465,940 + -0.5 465,940 + +0.9 465,940 + -0.7 465,940 + +1.5 465,940 + +0.0 465,940 + -0.9 465,940 + -0.8 465,940 + -0.3 465,941 - -1.2 465,941 - -0.6 465,941 - -0.4 465,941 - -0.7 465,941 - +0.9 465,941 - -1.0 465,941 - -0.5 465,941 - +0.1 465,941 - -0.3 466,170 + MPMX19_03171 0.25 -0.0 466,170 + MPMX19_03171 0.25 -0.9 466,170 + MPMX19_03171 0.25 -0.9 466,170 + MPMX19_03171 0.25 -0.8 466,170 + MPMX19_03171 0.25 +0.9 466,170 + MPMX19_03171 0.25 +0.7 466,170 + MPMX19_03171 0.25 +0.5 466,170 + MPMX19_03171 0.25 -0.7 466,170 + MPMX19_03171 0.25 +0.5 466,170 + MPMX19_03171 0.25 +1.5 466,170 + MPMX19_03171 0.25 +0.0 466,170 + MPMX19_03171 0.25 -1.1 466,170 + MPMX19_03171 0.25 -1.5 466,170 + MPMX19_03171 0.25 +0.5 466,170 + MPMX19_03171 0.25 -1.1 466,170 + MPMX19_03171 0.25 -0.7 466,170 + MPMX19_03171 0.25 -0.9 466,170 + MPMX19_03171 0.25 +0.4 466,171 - MPMX19_03171 0.25 +1.9 466,171 - MPMX19_03171 0.25 -0.3 466,171 - MPMX19_03171 0.25 -1.2 466,171 - MPMX19_03171 0.25 -0.5 466,171 - MPMX19_03171 0.25 -0.3 466,171 - MPMX19_03171 0.25 -1.4 466,171 - MPMX19_03171 0.25 -0.6 466,171 - MPMX19_03171 0.25 -0.3 466,171 - MPMX19_03171 0.25 +0.3 466,171 - MPMX19_03171 0.25 +0.5 466,171 - MPMX19_03171 0.25 -0.3 466,206 + MPMX19_03171 0.33 -1.0 466,206 + MPMX19_03171 0.33 -0.1 466,206 + MPMX19_03171 0.33 -0.2 466,207 - MPMX19_03171 0.33 -0.9 466,207 - MPMX19_03171 0.33 +0.2 466,230 + MPMX19_03171 0.37 +0.9 466,230 + MPMX19_03171 0.37 -3.0 466,230 + MPMX19_03171 0.37 -0.5 466,230 + MPMX19_03171 0.37 -1.7 466,230 + MPMX19_03171 0.37 +0.1 466,230 + MPMX19_03171 0.37 +1.2 466,230 + MPMX19_03171 0.37 -0.4 466,231 - MPMX19_03171 0.38 -0.3 466,231 - MPMX19_03171 0.38 -1.1 466,231 - MPMX19_03171 0.38 -0.9 466,231 - MPMX19_03171 0.38 -0.6 466,368 + MPMX19_03171 0.66 +0.9 466,368 + MPMX19_03171 0.66 +0.3 466,368 + MPMX19_03171 0.66 -1.0 466,369 - MPMX19_03171 0.66 -1.4 466,369 - MPMX19_03171 0.66 +0.9 466,369 - MPMX19_03171 0.66 +0.0 466,369 - MPMX19_03171 0.66 -1.1 466,369 - MPMX19_03171 0.66 -0.1 466,369 - MPMX19_03171 0.66 -0.6 466,551 + -0.7 466,552 - -0.1 466,569 + -0.7 466,569 + +0.1 466,570 - -2.3 466,570 - -0.3 466,640 + -0.1 466,640 + -2.2 466,640 + -1.5 466,641 - +0.5 466,726 + -0.1 466,726 + +0.0 466,726 + -1.0 466,726 + -0.5 466,726 + -0.3 466,726 + -0.4 466,726 + -0.1 466,726 + -1.8 466,726 + +0.3 466,727 - +0.5 466,727 - -0.9 466,727 - +0.1 466,727 - +1.7 466,848 + +1.1 466,848 + -0.3 466,848 + -2.7 466,848 + -1.3 466,848 + -0.5 466,849 - -0.5 466,849 - -0.6 466,849 - -1.8 466,849 - -0.9 466,849 - -0.3 466,849 - -0.1 466,923 + MPMX19_03172 0.11 -0.5 466,923 + MPMX19_03172 0.11 -2.9 466,923 + MPMX19_03172 0.11 +0.3 466,923 + MPMX19_03172 0.11 -0.4 466,923 + MPMX19_03172 0.11 +0.0 466,924 - MPMX19_03172 0.11 -0.7 466,924 - MPMX19_03172 0.11 -1.6 466,971 + MPMX19_03172 0.13 -0.7 466,971 + MPMX19_03172 0.13 +0.3 466,971 + MPMX19_03172 0.13 +0.1 466,971 + MPMX19_03172 0.13 +0.1 466,972 - MPMX19_03172 0.13 -0.5 466,972 - MPMX19_03172 0.13 -0.7 466,972 - MPMX19_03172 0.13 -0.5 466,972 - MPMX19_03172 0.13 -1.1 466,972 - MPMX19_03172 0.13 +0.6 466,972 - MPMX19_03172 0.13 -1.1 466,989 + MPMX19_03172 0.13 +1.5 466,990 - MPMX19_03172 0.13 +0.0
Or see this region's nucleotide sequence