Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_02848 and MPMX19_02849 are separated by 49 nucleotides MPMX19_02849 and MPMX19_02850 are separated by 116 nucleotides
MPMX19_02848: MPMX19_02848 - Riboflavin transporter, at 91,011 to 91,961
_02848
MPMX19_02849: MPMX19_02849 - Phosphoglycerate kinase, at 92,011 to 92,769
_02849
MPMX19_02850: MPMX19_02850 - Glyceraldehyde-3-phosphate dehydrogenase 1, at 92,886 to 93,908
_02850
Position (kb)
92
93 Strain fitness (log2 ratio)
-2
-1
0
1 at 91.026 kb on - strand at 91.141 kb on - strand, within MPMX19_02848 at 91.308 kb on + strand, within MPMX19_02848 at 91.308 kb on + strand, within MPMX19_02848 at 91.308 kb on + strand, within MPMX19_02848 at 91.308 kb on + strand, within MPMX19_02848 at 91.308 kb on + strand, within MPMX19_02848 at 91.309 kb on - strand, within MPMX19_02848 at 91.309 kb on - strand, within MPMX19_02848 at 91.309 kb on - strand, within MPMX19_02848 at 91.309 kb on - strand, within MPMX19_02848 at 91.309 kb on - strand, within MPMX19_02848 at 91.347 kb on + strand, within MPMX19_02848 at 91.347 kb on + strand, within MPMX19_02848 at 91.347 kb on + strand, within MPMX19_02848 at 91.348 kb on - strand, within MPMX19_02848 at 91.348 kb on - strand, within MPMX19_02848 at 91.521 kb on + strand, within MPMX19_02848 at 91.522 kb on - strand, within MPMX19_02848 at 91.522 kb on - strand, within MPMX19_02848 at 91.587 kb on + strand, within MPMX19_02848 at 91.587 kb on + strand, within MPMX19_02848 at 91.587 kb on + strand, within MPMX19_02848 at 91.587 kb on + strand, within MPMX19_02848 at 91.587 kb on + strand, within MPMX19_02848 at 91.588 kb on - strand, within MPMX19_02848 at 91.588 kb on - strand, within MPMX19_02848 at 91.588 kb on - strand, within MPMX19_02848 at 91.588 kb on - strand, within MPMX19_02848 at 91.707 kb on + strand, within MPMX19_02848 at 91.707 kb on + strand, within MPMX19_02848 at 91.707 kb on + strand, within MPMX19_02848 at 91.707 kb on + strand, within MPMX19_02848 at 91.707 kb on + strand, within MPMX19_02848 at 91.707 kb on + strand, within MPMX19_02848 at 91.707 kb on + strand, within MPMX19_02848 at 91.708 kb on - strand, within MPMX19_02848 at 91.708 kb on - strand, within MPMX19_02848 at 91.708 kb on - strand, within MPMX19_02848 at 91.708 kb on - strand, within MPMX19_02848 at 91.726 kb on - strand, within MPMX19_02848 at 91.764 kb on + strand, within MPMX19_02848 at 91.764 kb on + strand, within MPMX19_02848 at 91.764 kb on + strand, within MPMX19_02848 at 91.764 kb on + strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.765 kb on - strand, within MPMX19_02848 at 91.779 kb on + strand, within MPMX19_02848 at 91.779 kb on + strand, within MPMX19_02848 at 91.780 kb on - strand, within MPMX19_02848 at 91.780 kb on - strand, within MPMX19_02848 at 91.780 kb on - strand, within MPMX19_02848 at 91.780 kb on - strand, within MPMX19_02848 at 91.780 kb on - strand, within MPMX19_02848 at 91.878 kb on + strand at 92.016 kb on + strand at 92.016 kb on + strand at 92.016 kb on + strand at 92.016 kb on + strand at 92.016 kb on + strand at 92.016 kb on + strand at 92.017 kb on - strand at 92.017 kb on - strand at 92.554 kb on + strand, within MPMX19_02849 at 92.788 kb on - strand at 92.788 kb on - strand at 92.893 kb on + strand at 92.894 kb on - strand at 92.894 kb on - strand at 92.950 kb on - strand at 92.950 kb on - strand at 93.031 kb on - strand, within MPMX19_02850 at 93.031 kb on - strand, within MPMX19_02850 at 93.730 kb on - strand, within MPMX19_02850 at 93.730 kb on - strand, within MPMX19_02850
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 91,026 - -2.2 91,141 - MPMX19_02848 0.14 -0.4 91,308 + MPMX19_02848 0.31 +0.5 91,308 + MPMX19_02848 0.31 -0.5 91,308 + MPMX19_02848 0.31 -1.3 91,308 + MPMX19_02848 0.31 -0.8 91,308 + MPMX19_02848 0.31 -0.7 91,309 - MPMX19_02848 0.31 -0.9 91,309 - MPMX19_02848 0.31 -0.2 91,309 - MPMX19_02848 0.31 -0.8 91,309 - MPMX19_02848 0.31 -0.9 91,309 - MPMX19_02848 0.31 -0.7 91,347 + MPMX19_02848 0.35 -1.7 91,347 + MPMX19_02848 0.35 -2.2 91,347 + MPMX19_02848 0.35 -0.8 91,348 - MPMX19_02848 0.35 -0.2 91,348 - MPMX19_02848 0.35 +0.4 91,521 + MPMX19_02848 0.54 -0.1 91,522 - MPMX19_02848 0.54 +0.2 91,522 - MPMX19_02848 0.54 +0.0 91,587 + MPMX19_02848 0.61 -0.7 91,587 + MPMX19_02848 0.61 -1.4 91,587 + MPMX19_02848 0.61 -0.4 91,587 + MPMX19_02848 0.61 -1.2 91,587 + MPMX19_02848 0.61 -0.2 91,588 - MPMX19_02848 0.61 +1.4 91,588 - MPMX19_02848 0.61 -1.2 91,588 - MPMX19_02848 0.61 -0.4 91,588 - MPMX19_02848 0.61 -0.9 91,707 + MPMX19_02848 0.73 -0.2 91,707 + MPMX19_02848 0.73 -1.2 91,707 + MPMX19_02848 0.73 -0.4 91,707 + MPMX19_02848 0.73 -1.2 91,707 + MPMX19_02848 0.73 -1.1 91,707 + MPMX19_02848 0.73 -0.8 91,707 + MPMX19_02848 0.73 -1.1 91,708 - MPMX19_02848 0.73 -0.4 91,708 - MPMX19_02848 0.73 +1.4 91,708 - MPMX19_02848 0.73 -1.2 91,708 - MPMX19_02848 0.73 +0.2 91,726 - MPMX19_02848 0.75 -0.3 91,764 + MPMX19_02848 0.79 +0.4 91,764 + MPMX19_02848 0.79 -1.5 91,764 + MPMX19_02848 0.79 -0.4 91,764 + MPMX19_02848 0.79 +1.0 91,765 - MPMX19_02848 0.79 -1.1 91,765 - MPMX19_02848 0.79 +0.4 91,765 - MPMX19_02848 0.79 -0.4 91,765 - MPMX19_02848 0.79 -1.3 91,765 - MPMX19_02848 0.79 -0.5 91,765 - MPMX19_02848 0.79 +1.1 91,765 - MPMX19_02848 0.79 -0.3 91,765 - MPMX19_02848 0.79 -2.3 91,779 + MPMX19_02848 0.81 -0.5 91,779 + MPMX19_02848 0.81 +0.4 91,780 - MPMX19_02848 0.81 -1.1 91,780 - MPMX19_02848 0.81 -1.3 91,780 - MPMX19_02848 0.81 -0.0 91,780 - MPMX19_02848 0.81 +0.8 91,780 - MPMX19_02848 0.81 -0.8 91,878 + -0.5 92,016 + +0.4 92,016 + -0.3 92,016 + -1.1 92,016 + -2.0 92,016 + -0.6 92,016 + -1.3 92,017 - +0.4 92,017 - -0.2 92,554 + MPMX19_02849 0.72 -0.2 92,788 - +0.2 92,788 - -2.3 92,893 + -0.4 92,894 - -0.4 92,894 - -0.8 92,950 - +1.2 92,950 - +0.3 93,031 - MPMX19_02850 0.14 -0.4 93,031 - MPMX19_02850 0.14 -2.4 93,730 - MPMX19_02850 0.83 -0.5 93,730 - MPMX19_02850 0.83 +0.6
Or see this region's nucleotide sequence