Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_02726

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_02725 and MPMX19_02726 overlap by 1 nucleotidesMPMX19_02726 and MPMX19_02727 are separated by 67 nucleotidesMPMX19_02727 and MPMX19_02728 are separated by 325 nucleotides MPMX19_02725: MPMX19_02725 - N-acetylmuramate/N-acetylglucosamine kinase, at 2,865,524 to 2,866,552 _02725 MPMX19_02726: MPMX19_02726 - tRNA threonylcarbamoyladenosine biosynthesis protein TsaE, at 2,866,552 to 2,867,034 _02726 MPMX19_02727: MPMX19_02727 - hypothetical protein, at 2,867,102 to 2,867,539 _02727 MPMX19_02728: MPMX19_02728 - Ferredoxin--NADP reductase, at 2,867,865 to 2,868,902 _02728 Position (kb) 2866 2867 2868Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.663 kb on + strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.664 kb on - strand, within MPMX19_02725at 2865.793 kb on - strand, within MPMX19_02725at 2865.867 kb on + strand, within MPMX19_02725at 2865.867 kb on + strand, within MPMX19_02725at 2865.867 kb on + strand, within MPMX19_02725at 2865.867 kb on + strand, within MPMX19_02725at 2865.868 kb on - strand, within MPMX19_02725at 2865.868 kb on - strand, within MPMX19_02725at 2865.868 kb on - strand, within MPMX19_02725at 2865.868 kb on - strand, within MPMX19_02725at 2865.868 kb on - strand, within MPMX19_02725at 2865.868 kb on - strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.960 kb on + strand, within MPMX19_02725at 2865.961 kb on - strand, within MPMX19_02725at 2865.961 kb on - strand, within MPMX19_02725at 2865.961 kb on - strand, within MPMX19_02725at 2865.961 kb on - strand, within MPMX19_02725at 2866.078 kb on + strand, within MPMX19_02725at 2866.078 kb on + strand, within MPMX19_02725at 2866.078 kb on + strand, within MPMX19_02725at 2866.078 kb on + strand, within MPMX19_02725at 2866.078 kb on + strand, within MPMX19_02725at 2866.078 kb on + strand, within MPMX19_02725at 2866.079 kb on - strand, within MPMX19_02725at 2866.079 kb on - strand, within MPMX19_02725at 2866.079 kb on - strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.080 kb on + strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.081 kb on - strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.128 kb on + strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.129 kb on - strand, within MPMX19_02725at 2866.209 kb on + strand, within MPMX19_02725at 2866.209 kb on + strand, within MPMX19_02725at 2866.209 kb on + strand, within MPMX19_02725at 2866.209 kb on + strand, within MPMX19_02725at 2866.209 kb on + strand, within MPMX19_02725at 2866.210 kb on - strand, within MPMX19_02725at 2866.210 kb on - strand, within MPMX19_02725at 2866.210 kb on - strand, within MPMX19_02725at 2866.210 kb on - strand, within MPMX19_02725at 2866.440 kb on + strand, within MPMX19_02725at 2866.440 kb on + strand, within MPMX19_02725at 2866.441 kb on - strand, within MPMX19_02725at 2866.441 kb on - strand, within MPMX19_02725at 2866.553 kb on + strandat 2866.553 kb on + strandat 2866.553 kb on + strandat 2866.553 kb on + strandat 2866.553 kb on + strandat 2866.553 kb on + strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2866.554 kb on - strandat 2867.044 kb on - strandat 2867.044 kb on - strandat 2867.103 kb on + strandat 2867.103 kb on + strandat 2867.103 kb on + strandat 2867.103 kb on + strandat 2867.104 kb on - strandat 2867.104 kb on - strandat 2867.104 kb on - strandat 2867.301 kb on + strand, within MPMX19_02727at 2867.302 kb on - strand, within MPMX19_02727at 2867.424 kb on + strand, within MPMX19_02727at 2867.424 kb on + strand, within MPMX19_02727at 2867.424 kb on + strand, within MPMX19_02727at 2867.424 kb on + strand, within MPMX19_02727at 2867.424 kb on + strand, within MPMX19_02727at 2867.425 kb on - strand, within MPMX19_02727at 2867.425 kb on - strand, within MPMX19_02727at 2867.425 kb on - strand, within MPMX19_02727at 2867.425 kb on - strand, within MPMX19_02727at 2867.425 kb on - strand, within MPMX19_02727at 2867.425 kb on - strand, within MPMX19_02727at 2867.653 kb on + strandat 2867.663 kb on + strandat 2867.664 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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2,865,663 + MPMX19_02725 0.14 -0.8
2,865,663 + MPMX19_02725 0.14 +0.2
2,865,663 + MPMX19_02725 0.14 +0.1
2,865,663 + MPMX19_02725 0.14 +0.4
2,865,663 + MPMX19_02725 0.14 +1.9
2,865,663 + MPMX19_02725 0.14 -0.9
2,865,663 + MPMX19_02725 0.14 -0.7
2,865,663 + MPMX19_02725 0.14 -0.9
2,865,663 + MPMX19_02725 0.14 -0.8
2,865,663 + MPMX19_02725 0.14 -0.1
2,865,663 + MPMX19_02725 0.14 +0.8
2,865,663 + MPMX19_02725 0.14 +1.0
2,865,664 - MPMX19_02725 0.14 -2.1
2,865,664 - MPMX19_02725 0.14 -1.4
2,865,664 - MPMX19_02725 0.14 -1.5
2,865,664 - MPMX19_02725 0.14 -0.7
2,865,664 - MPMX19_02725 0.14 -0.2
2,865,664 - MPMX19_02725 0.14 -0.8
2,865,664 - MPMX19_02725 0.14 -1.7
2,865,664 - MPMX19_02725 0.14 -0.3
2,865,664 - MPMX19_02725 0.14 -1.1
2,865,664 - MPMX19_02725 0.14 -1.1
2,865,664 - MPMX19_02725 0.14 +0.2
2,865,793 - MPMX19_02725 0.26 -1.9
2,865,867 + MPMX19_02725 0.33 +0.3
2,865,867 + MPMX19_02725 0.33 +0.9
2,865,867 + MPMX19_02725 0.33 -2.1
2,865,867 + MPMX19_02725 0.33 +0.8
2,865,868 - MPMX19_02725 0.33 -0.7
2,865,868 - MPMX19_02725 0.33 -1.1
2,865,868 - MPMX19_02725 0.33 -0.3
2,865,868 - MPMX19_02725 0.33 -1.4
2,865,868 - MPMX19_02725 0.33 -0.8
2,865,868 - MPMX19_02725 0.33 +0.4
2,865,960 + MPMX19_02725 0.42 -0.1
2,865,960 + MPMX19_02725 0.42 -0.9
2,865,960 + MPMX19_02725 0.42 -0.1
2,865,960 + MPMX19_02725 0.42 -1.5
2,865,960 + MPMX19_02725 0.42 +1.9
2,865,960 + MPMX19_02725 0.42 -0.1
2,865,960 + MPMX19_02725 0.42 -0.9
2,865,960 + MPMX19_02725 0.42 -0.6
2,865,960 + MPMX19_02725 0.42 -0.9
2,865,960 + MPMX19_02725 0.42 -1.7
2,865,961 - MPMX19_02725 0.42 -1.7
2,865,961 - MPMX19_02725 0.42 +0.5
2,865,961 - MPMX19_02725 0.42 +1.3
2,865,961 - MPMX19_02725 0.42 -0.1
2,866,078 + MPMX19_02725 0.54 -1.1
2,866,078 + MPMX19_02725 0.54 -0.1
2,866,078 + MPMX19_02725 0.54 +0.1
2,866,078 + MPMX19_02725 0.54 -1.0
2,866,078 + MPMX19_02725 0.54 -1.6
2,866,078 + MPMX19_02725 0.54 -2.1
2,866,079 - MPMX19_02725 0.54 -0.3
2,866,079 - MPMX19_02725 0.54 -1.1
2,866,079 - MPMX19_02725 0.54 +0.5
2,866,080 + MPMX19_02725 0.54 +0.4
2,866,080 + MPMX19_02725 0.54 +0.7
2,866,080 + MPMX19_02725 0.54 -0.8
2,866,080 + MPMX19_02725 0.54 +0.2
2,866,080 + MPMX19_02725 0.54 -1.3
2,866,080 + MPMX19_02725 0.54 +0.2
2,866,080 + MPMX19_02725 0.54 -0.1
2,866,080 + MPMX19_02725 0.54 -0.4
2,866,080 + MPMX19_02725 0.54 -2.0
2,866,080 + MPMX19_02725 0.54 +0.2
2,866,080 + MPMX19_02725 0.54 -0.5
2,866,080 + MPMX19_02725 0.54 -0.5
2,866,080 + MPMX19_02725 0.54 +0.8
2,866,080 + MPMX19_02725 0.54 -0.7
2,866,080 + MPMX19_02725 0.54 -0.7
2,866,080 + MPMX19_02725 0.54 -0.7
2,866,080 + MPMX19_02725 0.54 -0.1
2,866,080 + MPMX19_02725 0.54 -0.7
2,866,080 + MPMX19_02725 0.54 +1.5
2,866,080 + MPMX19_02725 0.54 -0.5
2,866,080 + MPMX19_02725 0.54 -0.8
2,866,080 + MPMX19_02725 0.54 -0.3
2,866,080 + MPMX19_02725 0.54 -0.7
2,866,080 + MPMX19_02725 0.54 -0.5
2,866,080 + MPMX19_02725 0.54 -1.5
2,866,080 + MPMX19_02725 0.54 +0.2
2,866,080 + MPMX19_02725 0.54 -0.5
2,866,080 + MPMX19_02725 0.54 -1.8
2,866,080 + MPMX19_02725 0.54 +0.3
2,866,080 + MPMX19_02725 0.54 -1.4
2,866,080 + MPMX19_02725 0.54 -1.0
2,866,080 + MPMX19_02725 0.54 -0.5
2,866,080 + MPMX19_02725 0.54 -0.4
2,866,080 + MPMX19_02725 0.54 +0.3
2,866,080 + MPMX19_02725 0.54 -1.1
2,866,080 + MPMX19_02725 0.54 +1.3
2,866,080 + MPMX19_02725 0.54 -1.8
2,866,080 + MPMX19_02725 0.54 -0.7
2,866,081 - MPMX19_02725 0.54 -0.5
2,866,081 - MPMX19_02725 0.54 -1.6
2,866,081 - MPMX19_02725 0.54 -2.3
2,866,081 - MPMX19_02725 0.54 -0.8
2,866,081 - MPMX19_02725 0.54 +1.5
2,866,081 - MPMX19_02725 0.54 +0.1
2,866,081 - MPMX19_02725 0.54 -2.5
2,866,081 - MPMX19_02725 0.54 -0.3
2,866,081 - MPMX19_02725 0.54 -0.3
2,866,081 - MPMX19_02725 0.54 +0.3
2,866,081 - MPMX19_02725 0.54 +0.1
2,866,081 - MPMX19_02725 0.54 +0.2
2,866,081 - MPMX19_02725 0.54 -0.5
2,866,081 - MPMX19_02725 0.54 -0.2
2,866,081 - MPMX19_02725 0.54 -0.8
2,866,081 - MPMX19_02725 0.54 -0.8
2,866,081 - MPMX19_02725 0.54 -1.4
2,866,081 - MPMX19_02725 0.54 -1.3
2,866,081 - MPMX19_02725 0.54 +0.7
2,866,081 - MPMX19_02725 0.54 -2.0
2,866,081 - MPMX19_02725 0.54 -0.8
2,866,081 - MPMX19_02725 0.54 +0.1
2,866,081 - MPMX19_02725 0.54 -0.3
2,866,081 - MPMX19_02725 0.54 -1.6
2,866,081 - MPMX19_02725 0.54 -0.1
2,866,081 - MPMX19_02725 0.54 -0.1
2,866,081 - MPMX19_02725 0.54 -0.2
2,866,081 - MPMX19_02725 0.54 -0.7
2,866,081 - MPMX19_02725 0.54 -0.7
2,866,081 - MPMX19_02725 0.54 -0.9
2,866,128 + MPMX19_02725 0.59 +0.1
2,866,128 + MPMX19_02725 0.59 -2.0
2,866,128 + MPMX19_02725 0.59 -0.1
2,866,128 + MPMX19_02725 0.59 -0.1
2,866,128 + MPMX19_02725 0.59 -0.1
2,866,128 + MPMX19_02725 0.59 -2.1
2,866,128 + MPMX19_02725 0.59 -1.1
2,866,128 + MPMX19_02725 0.59 -0.4
2,866,128 + MPMX19_02725 0.59 -0.3
2,866,128 + MPMX19_02725 0.59 +0.5
2,866,128 + MPMX19_02725 0.59 -1.4
2,866,128 + MPMX19_02725 0.59 -0.1
2,866,128 + MPMX19_02725 0.59 -1.1
2,866,129 - MPMX19_02725 0.59 -1.1
2,866,129 - MPMX19_02725 0.59 -0.1
2,866,129 - MPMX19_02725 0.59 -0.7
2,866,129 - MPMX19_02725 0.59 -1.2
2,866,129 - MPMX19_02725 0.59 +0.3
2,866,129 - MPMX19_02725 0.59 -0.3
2,866,129 - MPMX19_02725 0.59 -1.6
2,866,129 - MPMX19_02725 0.59 +0.2
2,866,129 - MPMX19_02725 0.59 +0.5
2,866,129 - MPMX19_02725 0.59 +0.1
2,866,129 - MPMX19_02725 0.59 +1.5
2,866,129 - MPMX19_02725 0.59 -1.7
2,866,129 - MPMX19_02725 0.59 +1.0
2,866,129 - MPMX19_02725 0.59 -1.7
2,866,129 - MPMX19_02725 0.59 -1.5
2,866,129 - MPMX19_02725 0.59 -1.1
2,866,209 + MPMX19_02725 0.67 +0.5
2,866,209 + MPMX19_02725 0.67 -0.2
2,866,209 + MPMX19_02725 0.67 -0.5
2,866,209 + MPMX19_02725 0.67 -0.2
2,866,209 + MPMX19_02725 0.67 -0.5
2,866,210 - MPMX19_02725 0.67 -0.3
2,866,210 - MPMX19_02725 0.67 +0.6
2,866,210 - MPMX19_02725 0.67 +0.1
2,866,210 - MPMX19_02725 0.67 -0.2
2,866,440 + MPMX19_02725 0.89 +0.8
2,866,440 + MPMX19_02725 0.89 +0.5
2,866,441 - MPMX19_02725 0.89 -0.7
2,866,441 - MPMX19_02725 0.89 -1.9
2,866,553 + -1.6
2,866,553 + +0.1
2,866,553 + -0.1
2,866,553 + -1.1
2,866,553 + -1.3
2,866,553 + -1.1
2,866,554 - -0.5
2,866,554 - -0.6
2,866,554 - -0.8
2,866,554 - -1.4
2,866,554 - -0.3
2,866,554 - -0.2
2,866,554 - -0.8
2,866,554 - +0.1
2,866,554 - -0.5
2,867,044 - -0.7
2,867,044 - -0.1
2,867,103 + -2.7
2,867,103 + +0.4
2,867,103 + -0.7
2,867,103 + -3.2
2,867,104 - -0.3
2,867,104 - -3.0
2,867,104 - -1.3
2,867,301 + MPMX19_02727 0.45 -0.8
2,867,302 - MPMX19_02727 0.46 +0.1
2,867,424 + MPMX19_02727 0.74 -0.4
2,867,424 + MPMX19_02727 0.74 -1.1
2,867,424 + MPMX19_02727 0.74 +0.5
2,867,424 + MPMX19_02727 0.74 -0.2
2,867,424 + MPMX19_02727 0.74 -0.5
2,867,425 - MPMX19_02727 0.74 -2.1
2,867,425 - MPMX19_02727 0.74 -1.2
2,867,425 - MPMX19_02727 0.74 -1.2
2,867,425 - MPMX19_02727 0.74 -0.3
2,867,425 - MPMX19_02727 0.74 +0.9
2,867,425 - MPMX19_02727 0.74 -1.6
2,867,653 + -1.2
2,867,663 + -0.5
2,867,664 - -1.7

Or see this region's nucleotide sequence