Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_01792 and MPMX19_01793 are separated by 391 nucleotides MPMX19_01793 and MPMX19_01794 are separated by 116 nucleotides MPMX19_01794 and MPMX19_01795 are separated by 132 nucleotides
MPMX19_01792: MPMX19_01792 - Putative HTH-type transcriptional regulator YhjB, at 1,877,815 to 1,878,534
_01792
MPMX19_01793: MPMX19_01793 - Transcriptional regulatory protein DegU, at 1,878,926 to 1,879,594
_01793
MPMX19_01794: MPMX19_01794 - Putative cysteine protease YraA, at 1,879,711 to 1,880,283
_01794
MPMX19_01795: MPMX19_01795 - hypothetical protein, at 1,880,416 to 1,880,772
_01795
Position (kb)
1878
1879
1880 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.158 kb on + strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.159 kb on - strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.323 kb on + strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.324 kb on - strand, within MPMX19_01792 at 1878.498 kb on + strand at 1878.499 kb on - strand at 1878.545 kb on + strand at 1878.545 kb on + strand at 1878.545 kb on + strand at 1878.545 kb on + strand at 1878.546 kb on - strand at 1878.546 kb on - strand at 1878.637 kb on - strand at 1878.637 kb on - strand at 1878.637 kb on - strand at 1878.642 kb on + strand at 1878.642 kb on + strand at 1878.642 kb on + strand at 1878.643 kb on - strand at 1878.647 kb on - strand at 1878.691 kb on + strand at 1878.691 kb on + strand at 1878.691 kb on + strand at 1878.692 kb on - strand at 1878.692 kb on - strand at 1878.742 kb on + strand at 1878.742 kb on + strand at 1878.743 kb on - strand at 1878.743 kb on - strand at 1878.744 kb on + strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.745 kb on - strand at 1878.766 kb on + strand at 1878.766 kb on + strand at 1878.767 kb on - strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.788 kb on + strand at 1878.789 kb on - strand at 1878.789 kb on - strand at 1878.797 kb on - strand at 1878.805 kb on - strand at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.229 kb on + strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.230 kb on - strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.301 kb on + strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.302 kb on - strand, within MPMX19_01793 at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.592 kb on + strand at 1879.593 kb on - strand at 1879.593 kb on - strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.644 kb on + strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.645 kb on - strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.649 kb on + strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.650 kb on - strand at 1879.651 kb on + strand at 1879.651 kb on + strand at 1879.652 kb on - strand at 1879.652 kb on - strand at 1879.652 kb on - strand at 1879.687 kb on + strand at 1879.688 kb on - strand at 1879.712 kb on + strand at 1879.712 kb on + strand at 1879.712 kb on + strand at 1879.712 kb on + strand at 1879.713 kb on - strand at 1879.713 kb on - strand at 1880.066 kb on + strand, within MPMX19_01794 at 1880.066 kb on + strand, within MPMX19_01794 at 1880.066 kb on + strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.067 kb on - strand, within MPMX19_01794 at 1880.327 kb on + strand at 1880.328 kb on - strand at 1880.328 kb on - strand at 1880.328 kb on - strand at 1880.382 kb on + strand at 1880.383 kb on - strand at 1880.383 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 1,878,158 + MPMX19_01792 0.48 -0.5 1,878,158 + MPMX19_01792 0.48 +0.5 1,878,158 + MPMX19_01792 0.48 -1.7 1,878,158 + MPMX19_01792 0.48 -0.7 1,878,158 + MPMX19_01792 0.48 -2.0 1,878,159 - MPMX19_01792 0.48 -0.9 1,878,159 - MPMX19_01792 0.48 +0.2 1,878,159 - MPMX19_01792 0.48 -0.6 1,878,159 - MPMX19_01792 0.48 -0.9 1,878,159 - MPMX19_01792 0.48 +0.8 1,878,159 - MPMX19_01792 0.48 -0.3 1,878,159 - MPMX19_01792 0.48 -0.9 1,878,159 - MPMX19_01792 0.48 -1.4 1,878,159 - MPMX19_01792 0.48 -2.0 1,878,159 - MPMX19_01792 0.48 +0.3 1,878,323 + MPMX19_01792 0.71 +2.4 1,878,323 + MPMX19_01792 0.71 -1.2 1,878,323 + MPMX19_01792 0.71 +0.8 1,878,323 + MPMX19_01792 0.71 -0.2 1,878,324 - MPMX19_01792 0.71 +0.4 1,878,324 - MPMX19_01792 0.71 -1.6 1,878,324 - MPMX19_01792 0.71 +0.5 1,878,324 - MPMX19_01792 0.71 +0.4 1,878,324 - MPMX19_01792 0.71 -0.3 1,878,498 + -1.9 1,878,499 - -0.9 1,878,545 + -0.4 1,878,545 + -1.3 1,878,545 + -2.3 1,878,545 + -1.2 1,878,546 - -1.9 1,878,546 - -0.2 1,878,637 - -0.6 1,878,637 - +0.8 1,878,637 - +0.3 1,878,642 + +0.4 1,878,642 + -0.9 1,878,642 + -1.7 1,878,643 - -1.8 1,878,647 - -0.4 1,878,691 + -1.2 1,878,691 + -1.2 1,878,691 + +1.1 1,878,692 - +0.4 1,878,692 - -1.0 1,878,742 + +0.1 1,878,742 + -0.0 1,878,743 - -1.5 1,878,743 - -0.0 1,878,744 + -0.7 1,878,745 - -0.6 1,878,745 - +1.4 1,878,745 - -0.3 1,878,745 - -0.7 1,878,745 - -1.2 1,878,745 - -1.6 1,878,745 - -0.7 1,878,766 + -0.4 1,878,766 + +0.7 1,878,767 - -1.2 1,878,788 + -0.3 1,878,788 + -0.5 1,878,788 + +0.6 1,878,788 + -0.4 1,878,788 + +0.4 1,878,788 + +1.0 1,878,788 + -2.8 1,878,788 + -1.4 1,878,789 - -0.2 1,878,789 - -0.2 1,878,797 - -2.1 1,878,805 - -0.2 1,879,229 + MPMX19_01793 0.45 -0.5 1,879,229 + MPMX19_01793 0.45 +0.4 1,879,229 + MPMX19_01793 0.45 +1.3 1,879,229 + MPMX19_01793 0.45 +1.4 1,879,229 + MPMX19_01793 0.45 +0.0 1,879,229 + MPMX19_01793 0.45 -0.2 1,879,230 - MPMX19_01793 0.45 -0.4 1,879,230 - MPMX19_01793 0.45 +1.6 1,879,230 - MPMX19_01793 0.45 -2.5 1,879,230 - MPMX19_01793 0.45 -0.4 1,879,230 - MPMX19_01793 0.45 +0.6 1,879,230 - MPMX19_01793 0.45 -1.3 1,879,230 - MPMX19_01793 0.45 -0.6 1,879,230 - MPMX19_01793 0.45 -0.5 1,879,230 - MPMX19_01793 0.45 -0.4 1,879,230 - MPMX19_01793 0.45 -0.7 1,879,301 + MPMX19_01793 0.56 -1.5 1,879,301 + MPMX19_01793 0.56 +0.0 1,879,301 + MPMX19_01793 0.56 +1.0 1,879,301 + MPMX19_01793 0.56 -1.8 1,879,301 + MPMX19_01793 0.56 -0.3 1,879,301 + MPMX19_01793 0.56 -1.3 1,879,301 + MPMX19_01793 0.56 -0.5 1,879,302 - MPMX19_01793 0.56 -1.9 1,879,302 - MPMX19_01793 0.56 +0.0 1,879,302 - MPMX19_01793 0.56 +0.6 1,879,302 - MPMX19_01793 0.56 -1.4 1,879,302 - MPMX19_01793 0.56 -1.2 1,879,592 + -0.0 1,879,592 + -1.8 1,879,592 + -1.5 1,879,592 + -0.2 1,879,592 + -0.4 1,879,592 + -1.2 1,879,592 + -1.6 1,879,592 + +0.3 1,879,592 + +0.0 1,879,592 + -0.9 1,879,593 - -1.4 1,879,593 - -1.0 1,879,644 + -1.3 1,879,644 + -0.4 1,879,644 + -0.7 1,879,644 + +0.7 1,879,644 + -0.1 1,879,644 + -1.5 1,879,644 + -0.4 1,879,644 + +0.6 1,879,644 + -0.7 1,879,644 + -2.9 1,879,645 - +0.4 1,879,645 - -0.7 1,879,645 - -1.7 1,879,645 - -0.2 1,879,645 - -0.2 1,879,645 - -1.8 1,879,645 - -1.1 1,879,645 - +0.1 1,879,649 + -0.3 1,879,649 + +0.4 1,879,649 + -0.9 1,879,649 + -1.5 1,879,649 + -0.2 1,879,649 + -2.3 1,879,649 + -1.9 1,879,649 + +0.2 1,879,649 + +0.6 1,879,649 + -0.4 1,879,649 + -0.0 1,879,649 + +0.7 1,879,649 + -0.3 1,879,649 + +0.1 1,879,649 + -1.0 1,879,649 + -0.9 1,879,649 + -0.9 1,879,649 + +0.1 1,879,649 + -3.4 1,879,649 + -1.4 1,879,649 + +0.8 1,879,649 + -1.1 1,879,649 + -1.3 1,879,649 + +0.6 1,879,649 + -0.3 1,879,649 + -0.2 1,879,649 + -0.2 1,879,650 - -0.6 1,879,650 - -1.6 1,879,650 - +0.4 1,879,650 - +0.3 1,879,650 - -1.0 1,879,650 - -1.7 1,879,650 - -1.0 1,879,650 - -2.2 1,879,650 - +0.6 1,879,650 - +0.8 1,879,650 - -1.3 1,879,650 - -1.8 1,879,650 - +1.4 1,879,650 - -0.3 1,879,650 - +0.3 1,879,650 - -0.2 1,879,650 - -0.8 1,879,650 - -0.6 1,879,650 - -2.5 1,879,650 - -0.7 1,879,650 - -2.5 1,879,650 - -1.3 1,879,650 - -0.7 1,879,650 - -1.4 1,879,650 - +0.1 1,879,650 - +0.4 1,879,650 - -1.4 1,879,650 - -2.9 1,879,650 - +0.3 1,879,650 - +0.1 1,879,650 - -0.9 1,879,650 - -3.2 1,879,650 - -0.4 1,879,651 + -0.4 1,879,651 + -0.7 1,879,652 - -0.6 1,879,652 - -1.8 1,879,652 - -2.1 1,879,687 + -1.2 1,879,688 - -1.4 1,879,712 + -1.3 1,879,712 + -0.3 1,879,712 + -0.4 1,879,712 + -0.6 1,879,713 - -0.5 1,879,713 - -2.0 1,880,066 + MPMX19_01794 0.62 -1.2 1,880,066 + MPMX19_01794 0.62 +0.8 1,880,066 + MPMX19_01794 0.62 +0.7 1,880,067 - MPMX19_01794 0.62 +1.4 1,880,067 - MPMX19_01794 0.62 +0.8 1,880,067 - MPMX19_01794 0.62 +0.6 1,880,067 - MPMX19_01794 0.62 +0.3 1,880,067 - MPMX19_01794 0.62 -1.0 1,880,067 - MPMX19_01794 0.62 -0.9 1,880,067 - MPMX19_01794 0.62 -1.0 1,880,067 - MPMX19_01794 0.62 -0.1 1,880,067 - MPMX19_01794 0.62 -0.4 1,880,067 - MPMX19_01794 0.62 -1.5 1,880,327 + -3.2 1,880,328 - -0.9 1,880,328 - +0.3 1,880,328 - -0.9 1,880,382 + -0.0 1,880,383 - -0.0 1,880,383 - -0.2
Or see this region's nucleotide sequence