Strain Fitness in Azospirillum sp. SherDot2 around MPMX19_00843

Experiment: MGL

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntMPMX19_00841 and MPMX19_00842 overlap by 4 nucleotidesMPMX19_00842 and MPMX19_00843 are separated by 0 nucleotidesMPMX19_00843 and MPMX19_00844 overlap by 8 nucleotides MPMX19_00841: MPMX19_00841 - Holo-[acyl-carrier-protein] synthase, at 873,525 to 874,004 _00841 MPMX19_00842: MPMX19_00842 - Signal peptidase I, at 874,001 to 874,768 _00842 MPMX19_00843: MPMX19_00843 - Ribonuclease 3, at 874,769 to 875,554 _00843 MPMX19_00844: MPMX19_00844 - GTPase Era, at 875,547 to 876,731 _00844 Position (kb) 874 875 876Strain fitness (log2 ratio) -1 0 1at 873.912 kb on + strand, within MPMX19_00841at 874.706 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction MGL
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873,912 + MPMX19_00841 0.81 -1.2
874,706 + -1.3

Or see this region's nucleotide sequence