Experiment: MGL
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt MPMX19_00566 and MPMX19_00567 are separated by 230 nucleotides MPMX19_00567 and MPMX19_00568 are separated by 76 nucleotides
MPMX19_00566: MPMX19_00566 - hypothetical protein, at 580,578 to 581,963
_00566
MPMX19_00567: MPMX19_00567 - hypothetical protein, at 582,194 to 582,718
_00567
MPMX19_00568: MPMX19_00568 - Methyl-accepting chemotaxis protein, at 582,795 to 584,063
_00568
Position (kb) 582
583 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 581.451 kb on + strand, within MPMX19_00566 at 581.451 kb on + strand, within MPMX19_00566 at 581.451 kb on + strand, within MPMX19_00566 at 581.451 kb on + strand, within MPMX19_00566 at 581.451 kb on + strand, within MPMX19_00566 at 581.452 kb on - strand, within MPMX19_00566 at 581.452 kb on - strand, within MPMX19_00566 at 581.452 kb on - strand, within MPMX19_00566 at 581.452 kb on - strand, within MPMX19_00566 at 581.452 kb on - strand, within MPMX19_00566 at 581.673 kb on + strand, within MPMX19_00566 at 581.674 kb on - strand, within MPMX19_00566 at 581.674 kb on - strand, within MPMX19_00566 at 581.811 kb on + strand, within MPMX19_00566 at 581.811 kb on + strand, within MPMX19_00566 at 581.812 kb on - strand, within MPMX19_00566 at 581.812 kb on - strand, within MPMX19_00566 at 581.812 kb on - strand, within MPMX19_00566 at 581.812 kb on - strand, within MPMX19_00566 at 581.949 kb on + strand at 582.050 kb on + strand at 582.050 kb on + strand at 582.050 kb on + strand at 582.050 kb on + strand at 582.050 kb on + strand at 582.050 kb on + strand at 582.050 kb on + strand at 582.050 kb on + strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.051 kb on - strand at 582.076 kb on + strand at 582.087 kb on - strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.112 kb on + strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.113 kb on - strand at 582.290 kb on + strand, within MPMX19_00567 at 582.290 kb on + strand, within MPMX19_00567 at 582.290 kb on + strand, within MPMX19_00567 at 582.290 kb on + strand, within MPMX19_00567 at 582.290 kb on + strand, within MPMX19_00567 at 582.291 kb on - strand, within MPMX19_00567 at 582.291 kb on - strand, within MPMX19_00567 at 582.291 kb on - strand, within MPMX19_00567 at 582.323 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.440 kb on + strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.441 kb on - strand, within MPMX19_00567 at 582.473 kb on + strand, within MPMX19_00567 at 582.474 kb on - strand, within MPMX19_00567 at 582.531 kb on - strand, within MPMX19_00567 at 582.587 kb on + strand, within MPMX19_00567 at 582.587 kb on + strand, within MPMX19_00567 at 582.588 kb on - strand, within MPMX19_00567 at 582.588 kb on - strand, within MPMX19_00567 at 582.588 kb on - strand, within MPMX19_00567 at 582.588 kb on - strand, within MPMX19_00567 at 582.588 kb on - strand, within MPMX19_00567 at 582.588 kb on - strand, within MPMX19_00567 at 582.692 kb on + strand at 582.693 kb on - strand at 582.693 kb on - strand at 582.693 kb on - strand at 582.716 kb on + strand at 582.716 kb on + strand at 582.716 kb on + strand at 582.716 kb on + strand at 582.717 kb on - strand at 582.717 kb on - strand at 582.717 kb on - strand at 582.717 kb on - strand at 582.717 kb on - strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.915 kb on + strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 582.916 kb on - strand at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.122 kb on + strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568 at 583.123 kb on - strand, within MPMX19_00568
Per-strain Table
Position Strand Gene LocusTag Fraction MGL remove 581,451 + MPMX19_00566 0.63 -0.4 581,451 + MPMX19_00566 0.63 -1.4 581,451 + MPMX19_00566 0.63 -0.2 581,451 + MPMX19_00566 0.63 -1.0 581,451 + MPMX19_00566 0.63 +1.4 581,452 - MPMX19_00566 0.63 +0.0 581,452 - MPMX19_00566 0.63 -2.0 581,452 - MPMX19_00566 0.63 -0.3 581,452 - MPMX19_00566 0.63 -2.0 581,452 - MPMX19_00566 0.63 -2.0 581,673 + MPMX19_00566 0.79 -0.2 581,674 - MPMX19_00566 0.79 -1.4 581,674 - MPMX19_00566 0.79 +0.8 581,811 + MPMX19_00566 0.89 -0.8 581,811 + MPMX19_00566 0.89 -1.2 581,812 - MPMX19_00566 0.89 -0.8 581,812 - MPMX19_00566 0.89 -1.7 581,812 - MPMX19_00566 0.89 -0.4 581,812 - MPMX19_00566 0.89 -0.4 581,949 + -1.1 582,050 + -1.7 582,050 + -0.4 582,050 + -0.2 582,050 + -0.8 582,050 + +0.8 582,050 + -0.9 582,050 + -1.0 582,050 + -1.0 582,051 - -1.8 582,051 - -1.0 582,051 - -0.4 582,051 - -1.9 582,051 - -1.4 582,051 - +0.6 582,051 - -0.2 582,051 - -0.9 582,051 - -2.2 582,051 - -1.2 582,051 - +0.2 582,051 - +1.1 582,051 - +0.0 582,076 + +0.0 582,087 - +0.0 582,112 + -0.8 582,112 + -1.2 582,112 + +0.6 582,112 + -1.6 582,112 + -1.1 582,112 + -0.8 582,112 + -0.5 582,112 + -0.0 582,112 + -1.4 582,112 + -0.8 582,113 - -0.0 582,113 - -1.2 582,113 - -1.1 582,113 - -2.2 582,113 - -1.0 582,113 - -1.4 582,113 - -0.3 582,113 - +0.0 582,113 - -0.6 582,113 - -0.7 582,290 + MPMX19_00567 0.18 -0.3 582,290 + MPMX19_00567 0.18 -1.1 582,290 + MPMX19_00567 0.18 -1.6 582,290 + MPMX19_00567 0.18 -2.1 582,290 + MPMX19_00567 0.18 -0.2 582,291 - MPMX19_00567 0.18 -0.7 582,291 - MPMX19_00567 0.18 -0.5 582,291 - MPMX19_00567 0.18 -2.0 582,323 + MPMX19_00567 0.25 +0.4 582,440 + MPMX19_00567 0.47 +0.1 582,440 + MPMX19_00567 0.47 +0.0 582,440 + MPMX19_00567 0.47 -1.0 582,440 + MPMX19_00567 0.47 -0.1 582,440 + MPMX19_00567 0.47 +0.8 582,440 + MPMX19_00567 0.47 +0.5 582,440 + MPMX19_00567 0.47 -1.4 582,440 + MPMX19_00567 0.47 -2.0 582,440 + MPMX19_00567 0.47 +0.4 582,440 + MPMX19_00567 0.47 -1.4 582,440 + MPMX19_00567 0.47 -1.1 582,440 + MPMX19_00567 0.47 -0.2 582,440 + MPMX19_00567 0.47 -0.4 582,440 + MPMX19_00567 0.47 -1.2 582,440 + MPMX19_00567 0.47 -1.5 582,440 + MPMX19_00567 0.47 -0.6 582,440 + MPMX19_00567 0.47 -1.4 582,440 + MPMX19_00567 0.47 -1.1 582,440 + MPMX19_00567 0.47 -2.4 582,441 - MPMX19_00567 0.47 +1.0 582,441 - MPMX19_00567 0.47 -0.6 582,441 - MPMX19_00567 0.47 -1.0 582,441 - MPMX19_00567 0.47 +0.9 582,441 - MPMX19_00567 0.47 -0.2 582,441 - MPMX19_00567 0.47 -0.6 582,441 - MPMX19_00567 0.47 -2.0 582,441 - MPMX19_00567 0.47 +0.6 582,441 - MPMX19_00567 0.47 +0.3 582,441 - MPMX19_00567 0.47 +1.0 582,441 - MPMX19_00567 0.47 -1.4 582,441 - MPMX19_00567 0.47 -2.2 582,441 - MPMX19_00567 0.47 -1.6 582,441 - MPMX19_00567 0.47 +0.2 582,441 - MPMX19_00567 0.47 -1.7 582,441 - MPMX19_00567 0.47 -1.6 582,441 - MPMX19_00567 0.47 -0.4 582,473 + MPMX19_00567 0.53 -1.6 582,474 - MPMX19_00567 0.53 +1.4 582,531 - MPMX19_00567 0.64 +0.0 582,587 + MPMX19_00567 0.75 -1.0 582,587 + MPMX19_00567 0.75 -3.1 582,588 - MPMX19_00567 0.75 +1.4 582,588 - MPMX19_00567 0.75 -1.0 582,588 - MPMX19_00567 0.75 +0.0 582,588 - MPMX19_00567 0.75 +0.6 582,588 - MPMX19_00567 0.75 -0.4 582,588 - MPMX19_00567 0.75 -0.2 582,692 + +2.4 582,693 - +1.1 582,693 - -1.9 582,693 - -1.9 582,716 + -2.8 582,716 + +0.4 582,716 + -3.1 582,716 + -0.6 582,717 - +1.0 582,717 - -0.9 582,717 - -0.6 582,717 - -0.6 582,717 - +0.0 582,915 + +0.8 582,915 + -0.8 582,915 + -1.3 582,915 + +0.2 582,915 + +0.4 582,915 + +0.6 582,915 + +0.8 582,915 + -1.2 582,915 + -0.1 582,915 + +0.4 582,915 + -1.5 582,915 + -0.8 582,915 + -0.2 582,916 - -0.4 582,916 - -1.3 582,916 - -1.0 582,916 - -0.5 582,916 - +0.3 582,916 - +0.5 582,916 - +0.4 582,916 - -0.2 582,916 - -1.8 582,916 - -1.1 582,916 - -1.1 582,916 - -1.1 582,916 - -1.5 582,916 - -1.0 583,122 + MPMX19_00568 0.26 -0.6 583,122 + MPMX19_00568 0.26 +0.4 583,122 + MPMX19_00568 0.26 -0.8 583,122 + MPMX19_00568 0.26 -0.8 583,122 + MPMX19_00568 0.26 +0.5 583,122 + MPMX19_00568 0.26 +0.5 583,122 + MPMX19_00568 0.26 -1.2 583,122 + MPMX19_00568 0.26 -1.6 583,122 + MPMX19_00568 0.26 -1.7 583,122 + MPMX19_00568 0.26 -1.0 583,122 + MPMX19_00568 0.26 -1.0 583,123 - MPMX19_00568 0.26 -1.1 583,123 - MPMX19_00568 0.26 -2.7 583,123 - MPMX19_00568 0.26 -1.5 583,123 - MPMX19_00568 0.26 -2.2 583,123 - MPMX19_00568 0.26 -0.8 583,123 - MPMX19_00568 0.26 -1.4 583,123 - MPMX19_00568 0.26 -1.4 583,123 - MPMX19_00568 0.26 -0.4 583,123 - MPMX19_00568 0.26 +0.8 583,123 - MPMX19_00568 0.26 -0.2 583,123 - MPMX19_00568 0.26 +0.0 583,123 - MPMX19_00568 0.26 -1.1 583,123 - MPMX19_00568 0.26 -2.0
Or see this region's nucleotide sequence