Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS10600 and A4249_RS16955 are separated by 110 nucleotides A4249_RS16955 and A4249_RS16960 overlap by 4 nucleotides A4249_RS16960 and A4249_RS10615 are separated by 222 nucleotides
A4249_RS10600: A4249_RS10600 - DNA primase, at 2,129,919 to 2,131,778
_RS10600
A4249_RS16955: A4249_RS16955 - hypothetical protein, at 2,131,889 to 2,132,542
_RS16955
A4249_RS16960: A4249_RS16960 - transcriptional regulator, at 2,132,539 to 2,132,814
_RS16960
A4249_RS10615: A4249_RS10615 - LD-carboxypeptidase, at 2,133,037 to 2,133,873
_RS10615
Position (kb)
2132
2133 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2131.790 kb on - strand at 2131.790 kb on - strand at 2131.931 kb on + strand at 2131.931 kb on + strand at 2131.932 kb on - strand at 2131.932 kb on - strand at 2132.009 kb on + strand, within A4249_RS16955 at 2132.010 kb on - strand, within A4249_RS16955 at 2132.010 kb on - strand, within A4249_RS16955 at 2132.010 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.096 kb on - strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.119 kb on + strand, within A4249_RS16955 at 2132.120 kb on - strand, within A4249_RS16955 at 2132.120 kb on - strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.121 kb on + strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.122 kb on - strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.187 kb on + strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.188 kb on - strand, within A4249_RS16955 at 2132.209 kb on + strand, within A4249_RS16955 at 2132.210 kb on - strand, within A4249_RS16955 at 2132.273 kb on - strand, within A4249_RS16955 at 2132.273 kb on - strand, within A4249_RS16955 at 2132.341 kb on - strand, within A4249_RS16955 at 2132.490 kb on + strand at 2132.490 kb on + strand at 2132.491 kb on - strand at 2132.491 kb on - strand at 2132.582 kb on + strand, within A4249_RS16960 at 2132.582 kb on + strand, within A4249_RS16960 at 2132.582 kb on + strand, within A4249_RS16960 at 2132.583 kb on - strand, within A4249_RS16960 at 2132.602 kb on + strand, within A4249_RS16960 at 2132.602 kb on + strand, within A4249_RS16960 at 2132.602 kb on + strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.603 kb on - strand, within A4249_RS16960 at 2132.707 kb on + strand, within A4249_RS16960 at 2132.707 kb on + strand, within A4249_RS16960 at 2132.708 kb on - strand, within A4249_RS16960 at 2132.708 kb on - strand, within A4249_RS16960 at 2132.709 kb on + strand, within A4249_RS16960 at 2132.709 kb on + strand, within A4249_RS16960 at 2132.710 kb on - strand, within A4249_RS16960 at 2132.710 kb on - strand, within A4249_RS16960 at 2132.710 kb on - strand, within A4249_RS16960 at 2132.794 kb on + strand at 2132.794 kb on + strand at 2132.794 kb on + strand at 2132.794 kb on + strand at 2132.794 kb on + strand at 2132.795 kb on - strand at 2132.795 kb on - strand at 2132.795 kb on - strand at 2132.795 kb on - strand at 2132.795 kb on - strand at 2132.795 kb on - strand at 2132.795 kb on - strand at 2132.812 kb on + strand at 2132.813 kb on - strand at 2132.989 kb on + strand at 2132.996 kb on + strand at 2132.996 kb on + strand at 2132.997 kb on - strand at 2132.997 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 2,131,790 - +0.6 2,131,790 - +2.0 2,131,931 + +1.0 2,131,931 + +1.8 2,131,932 - -1.3 2,131,932 - -0.7 2,132,009 + A4249_RS16955 0.18 +0.6 2,132,010 - A4249_RS16955 0.19 +1.4 2,132,010 - A4249_RS16955 0.19 +1.7 2,132,010 - A4249_RS16955 0.19 -0.0 2,132,096 - A4249_RS16955 0.32 +0.8 2,132,096 - A4249_RS16955 0.32 -0.6 2,132,096 - A4249_RS16955 0.32 -0.2 2,132,096 - A4249_RS16955 0.32 +0.3 2,132,119 + A4249_RS16955 0.35 +3.0 2,132,119 + A4249_RS16955 0.35 +0.7 2,132,119 + A4249_RS16955 0.35 -0.0 2,132,119 + A4249_RS16955 0.35 +0.3 2,132,119 + A4249_RS16955 0.35 -0.0 2,132,119 + A4249_RS16955 0.35 -1.6 2,132,119 + A4249_RS16955 0.35 -0.5 2,132,120 - A4249_RS16955 0.35 -0.7 2,132,120 - A4249_RS16955 0.35 -0.4 2,132,121 + A4249_RS16955 0.35 -0.7 2,132,121 + A4249_RS16955 0.35 -1.9 2,132,121 + A4249_RS16955 0.35 -0.6 2,132,121 + A4249_RS16955 0.35 -0.3 2,132,121 + A4249_RS16955 0.35 -0.1 2,132,121 + A4249_RS16955 0.35 -0.7 2,132,122 - A4249_RS16955 0.36 +1.0 2,132,122 - A4249_RS16955 0.36 +1.6 2,132,122 - A4249_RS16955 0.36 +2.0 2,132,122 - A4249_RS16955 0.36 -0.5 2,132,187 + A4249_RS16955 0.46 -1.1 2,132,187 + A4249_RS16955 0.46 -0.0 2,132,187 + A4249_RS16955 0.46 -0.6 2,132,187 + A4249_RS16955 0.46 -0.6 2,132,188 - A4249_RS16955 0.46 +0.8 2,132,188 - A4249_RS16955 0.46 +1.0 2,132,188 - A4249_RS16955 0.46 +0.8 2,132,188 - A4249_RS16955 0.46 -0.4 2,132,188 - A4249_RS16955 0.46 +0.3 2,132,209 + A4249_RS16955 0.49 -0.0 2,132,210 - A4249_RS16955 0.49 +0.8 2,132,273 - A4249_RS16955 0.59 -0.0 2,132,273 - A4249_RS16955 0.59 -1.2 2,132,341 - A4249_RS16955 0.69 -0.0 2,132,490 + -0.7 2,132,490 + -0.6 2,132,491 - -0.9 2,132,491 - -1.8 2,132,582 + A4249_RS16960 0.16 +0.1 2,132,582 + A4249_RS16960 0.16 -0.5 2,132,582 + A4249_RS16960 0.16 -2.0 2,132,583 - A4249_RS16960 0.16 -2.6 2,132,602 + A4249_RS16960 0.23 -2.3 2,132,602 + A4249_RS16960 0.23 +0.4 2,132,602 + A4249_RS16960 0.23 -1.0 2,132,603 - A4249_RS16960 0.23 +0.7 2,132,603 - A4249_RS16960 0.23 -0.0 2,132,603 - A4249_RS16960 0.23 -0.7 2,132,603 - A4249_RS16960 0.23 -0.6 2,132,603 - A4249_RS16960 0.23 -1.5 2,132,603 - A4249_RS16960 0.23 -0.8 2,132,707 + A4249_RS16960 0.61 -0.6 2,132,707 + A4249_RS16960 0.61 -0.8 2,132,708 - A4249_RS16960 0.61 -1.0 2,132,708 - A4249_RS16960 0.61 +1.5 2,132,709 + A4249_RS16960 0.62 -0.9 2,132,709 + A4249_RS16960 0.62 +0.1 2,132,710 - A4249_RS16960 0.62 +0.6 2,132,710 - A4249_RS16960 0.62 -0.0 2,132,710 - A4249_RS16960 0.62 -0.9 2,132,794 + -0.9 2,132,794 + +0.5 2,132,794 + +0.1 2,132,794 + -0.2 2,132,794 + -0.2 2,132,795 - -1.6 2,132,795 - -0.4 2,132,795 - -0.0 2,132,795 - -0.0 2,132,795 - -0.3 2,132,795 - +1.1 2,132,795 - +1.1 2,132,812 + +0.1 2,132,813 - -0.2 2,132,989 + -1.4 2,132,996 + -0.9 2,132,996 + +1.0 2,132,997 - -1.3 2,132,997 - +1.0
Or see this region's nucleotide sequence