Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15150 and A4249_RS15155 are separated by 255 nucleotides A4249_RS15155 and A4249_RS15160 are separated by 74 nucleotides
A4249_RS15150: A4249_RS15150 - hypothetical protein, at 3,061,355 to 3,061,921
_RS15150
A4249_RS15155: A4249_RS15155 - hypothetical protein, at 3,062,177 to 3,062,956
_RS15155
A4249_RS15160: A4249_RS15160 - hypothetical protein, at 3,063,031 to 3,063,807
_RS15160
Position (kb)
3062
3063 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2
3 at 3061.194 kb on + strand at 3061.195 kb on - strand at 3061.195 kb on - strand at 3061.195 kb on - strand at 3061.207 kb on - strand at 3061.207 kb on - strand at 3061.212 kb on + strand at 3061.399 kb on - strand at 3061.703 kb on + strand, within A4249_RS15150 at 3061.704 kb on - strand, within A4249_RS15150 at 3061.704 kb on - strand, within A4249_RS15150 at 3061.704 kb on - strand, within A4249_RS15150 at 3061.880 kb on + strand at 3062.255 kb on + strand, within A4249_RS15155 at 3062.288 kb on + strand, within A4249_RS15155 at 3062.288 kb on + strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.289 kb on - strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.338 kb on + strand, within A4249_RS15155 at 3062.339 kb on - strand, within A4249_RS15155 at 3062.339 kb on - strand, within A4249_RS15155 at 3062.339 kb on - strand, within A4249_RS15155 at 3062.378 kb on - strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.386 kb on + strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.387 kb on - strand, within A4249_RS15155 at 3062.500 kb on + strand, within A4249_RS15155 at 3063.027 kb on + strand at 3063.027 kb on + strand at 3063.028 kb on - strand at 3063.028 kb on - strand at 3063.028 kb on - strand at 3063.028 kb on - strand at 3063.028 kb on - strand at 3063.028 kb on - strand at 3063.028 kb on - strand at 3063.028 kb on - strand at 3063.109 kb on + strand, within A4249_RS15160 at 3063.109 kb on + strand, within A4249_RS15160 at 3063.110 kb on - strand, within A4249_RS15160 at 3063.110 kb on - strand, within A4249_RS15160 at 3063.110 kb on - strand, within A4249_RS15160 at 3063.110 kb on - strand, within A4249_RS15160 at 3063.110 kb on - strand, within A4249_RS15160 at 3063.110 kb on - strand, within A4249_RS15160 at 3063.133 kb on + strand, within A4249_RS15160 at 3063.133 kb on + strand, within A4249_RS15160 at 3063.134 kb on - strand, within A4249_RS15160 at 3063.172 kb on + strand, within A4249_RS15160 at 3063.172 kb on + strand, within A4249_RS15160 at 3063.172 kb on + strand, within A4249_RS15160 at 3063.172 kb on + strand, within A4249_RS15160 at 3063.172 kb on + strand, within A4249_RS15160 at 3063.172 kb on + strand, within A4249_RS15160 at 3063.172 kb on + strand, within A4249_RS15160 at 3063.173 kb on - strand, within A4249_RS15160 at 3063.173 kb on - strand, within A4249_RS15160 at 3063.173 kb on - strand, within A4249_RS15160 at 3063.173 kb on - strand, within A4249_RS15160 at 3063.208 kb on + strand, within A4249_RS15160 at 3063.208 kb on + strand, within A4249_RS15160 at 3063.208 kb on + strand, within A4249_RS15160 at 3063.208 kb on + strand, within A4249_RS15160 at 3063.208 kb on + strand, within A4249_RS15160 at 3063.209 kb on - strand, within A4249_RS15160 at 3063.346 kb on + strand, within A4249_RS15160 at 3063.880 kb on - strand at 3063.883 kb on - strand at 3063.893 kb on + strand at 3063.893 kb on + strand at 3063.893 kb on + strand at 3063.893 kb on + strand at 3063.893 kb on + strand at 3063.893 kb on + strand at 3063.893 kb on + strand at 3063.893 kb on + strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand at 3063.894 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 3,061,194 + -2.5 3,061,195 - -0.6 3,061,195 - -1.2 3,061,195 - -0.2 3,061,207 - -0.7 3,061,207 - +1.0 3,061,212 + +0.3 3,061,399 - +0.9 3,061,703 + A4249_RS15150 0.61 -0.2 3,061,704 - A4249_RS15150 0.62 +0.0 3,061,704 - A4249_RS15150 0.62 +3.0 3,061,704 - A4249_RS15150 0.62 -2.0 3,061,880 + +1.0 3,062,255 + A4249_RS15155 0.10 -1.5 3,062,288 + A4249_RS15155 0.14 -0.7 3,062,288 + A4249_RS15155 0.14 +0.6 3,062,289 - A4249_RS15155 0.14 +0.1 3,062,289 - A4249_RS15155 0.14 -0.4 3,062,289 - A4249_RS15155 0.14 -0.8 3,062,289 - A4249_RS15155 0.14 -0.6 3,062,289 - A4249_RS15155 0.14 -0.4 3,062,338 + A4249_RS15155 0.21 -1.1 3,062,338 + A4249_RS15155 0.21 -1.2 3,062,338 + A4249_RS15155 0.21 -0.6 3,062,338 + A4249_RS15155 0.21 -1.5 3,062,338 + A4249_RS15155 0.21 -3.3 3,062,339 - A4249_RS15155 0.21 -1.2 3,062,339 - A4249_RS15155 0.21 -0.8 3,062,339 - A4249_RS15155 0.21 +0.3 3,062,378 - A4249_RS15155 0.26 +0.0 3,062,386 + A4249_RS15155 0.27 +0.0 3,062,386 + A4249_RS15155 0.27 -0.6 3,062,386 + A4249_RS15155 0.27 +0.5 3,062,386 + A4249_RS15155 0.27 -0.6 3,062,387 - A4249_RS15155 0.27 -0.7 3,062,387 - A4249_RS15155 0.27 -0.3 3,062,387 - A4249_RS15155 0.27 -0.3 3,062,387 - A4249_RS15155 0.27 +1.5 3,062,500 + A4249_RS15155 0.41 -1.0 3,063,027 + -1.7 3,063,027 + +0.8 3,063,028 - -0.7 3,063,028 - -1.0 3,063,028 - +1.7 3,063,028 - +2.0 3,063,028 - -0.6 3,063,028 - +0.4 3,063,028 - +0.9 3,063,028 - +2.6 3,063,109 + A4249_RS15160 0.10 -1.0 3,063,109 + A4249_RS15160 0.10 +0.5 3,063,110 - A4249_RS15160 0.10 +0.2 3,063,110 - A4249_RS15160 0.10 +0.6 3,063,110 - A4249_RS15160 0.10 -2.0 3,063,110 - A4249_RS15160 0.10 -1.6 3,063,110 - A4249_RS15160 0.10 +0.7 3,063,110 - A4249_RS15160 0.10 +0.4 3,063,133 + A4249_RS15160 0.13 +2.0 3,063,133 + A4249_RS15160 0.13 -1.4 3,063,134 - A4249_RS15160 0.13 +0.3 3,063,172 + A4249_RS15160 0.18 +0.8 3,063,172 + A4249_RS15160 0.18 +0.4 3,063,172 + A4249_RS15160 0.18 +0.4 3,063,172 + A4249_RS15160 0.18 +0.4 3,063,172 + A4249_RS15160 0.18 +0.2 3,063,172 + A4249_RS15160 0.18 -4.0 3,063,172 + A4249_RS15160 0.18 -0.9 3,063,173 - A4249_RS15160 0.18 +0.5 3,063,173 - A4249_RS15160 0.18 +0.4 3,063,173 - A4249_RS15160 0.18 +0.0 3,063,173 - A4249_RS15160 0.18 +0.0 3,063,208 + A4249_RS15160 0.23 -0.5 3,063,208 + A4249_RS15160 0.23 -3.3 3,063,208 + A4249_RS15160 0.23 -0.4 3,063,208 + A4249_RS15160 0.23 +0.9 3,063,208 + A4249_RS15160 0.23 -1.0 3,063,209 - A4249_RS15160 0.23 -1.3 3,063,346 + A4249_RS15160 0.41 -0.5 3,063,880 - -0.4 3,063,883 - +1.5 3,063,893 + -0.2 3,063,893 + -1.4 3,063,893 + +0.0 3,063,893 + +1.0 3,063,893 + +0.2 3,063,893 + +1.0 3,063,893 + +0.1 3,063,893 + +0.0 3,063,894 - +2.8 3,063,894 - -0.2 3,063,894 - +0.1 3,063,894 - -0.3 3,063,894 - -0.1 3,063,894 - +0.9 3,063,894 - +0.8 3,063,894 - +0.0 3,063,894 - +0.1 3,063,894 - -1.2
Or see this region's nucleotide sequence