Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS15155

Experiment: Tween 20 (C), 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS15150 and A4249_RS15155 are separated by 255 nucleotidesA4249_RS15155 and A4249_RS15160 are separated by 74 nucleotides A4249_RS15150: A4249_RS15150 - hypothetical protein, at 3,061,355 to 3,061,921 _RS15150 A4249_RS15155: A4249_RS15155 - hypothetical protein, at 3,062,177 to 3,062,956 _RS15155 A4249_RS15160: A4249_RS15160 - hypothetical protein, at 3,063,031 to 3,063,807 _RS15160 Position (kb) 3062 3063Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 3061.194 kb on + strandat 3061.195 kb on - strandat 3061.195 kb on - strandat 3061.195 kb on - strandat 3061.207 kb on - strandat 3061.207 kb on - strandat 3061.212 kb on + strandat 3061.399 kb on - strandat 3061.703 kb on + strand, within A4249_RS15150at 3061.704 kb on - strand, within A4249_RS15150at 3061.704 kb on - strand, within A4249_RS15150at 3061.704 kb on - strand, within A4249_RS15150at 3061.880 kb on + strandat 3062.255 kb on + strand, within A4249_RS15155at 3062.288 kb on + strand, within A4249_RS15155at 3062.288 kb on + strand, within A4249_RS15155at 3062.289 kb on - strand, within A4249_RS15155at 3062.289 kb on - strand, within A4249_RS15155at 3062.289 kb on - strand, within A4249_RS15155at 3062.289 kb on - strand, within A4249_RS15155at 3062.289 kb on - strand, within A4249_RS15155at 3062.338 kb on + strand, within A4249_RS15155at 3062.338 kb on + strand, within A4249_RS15155at 3062.338 kb on + strand, within A4249_RS15155at 3062.338 kb on + strand, within A4249_RS15155at 3062.338 kb on + strand, within A4249_RS15155at 3062.339 kb on - strand, within A4249_RS15155at 3062.339 kb on - strand, within A4249_RS15155at 3062.339 kb on - strand, within A4249_RS15155at 3062.378 kb on - strand, within A4249_RS15155at 3062.386 kb on + strand, within A4249_RS15155at 3062.386 kb on + strand, within A4249_RS15155at 3062.386 kb on + strand, within A4249_RS15155at 3062.386 kb on + strand, within A4249_RS15155at 3062.387 kb on - strand, within A4249_RS15155at 3062.387 kb on - strand, within A4249_RS15155at 3062.387 kb on - strand, within A4249_RS15155at 3062.387 kb on - strand, within A4249_RS15155at 3062.500 kb on + strand, within A4249_RS15155at 3063.027 kb on + strandat 3063.027 kb on + strandat 3063.028 kb on - strandat 3063.028 kb on - strandat 3063.028 kb on - strandat 3063.028 kb on - strandat 3063.028 kb on - strandat 3063.028 kb on - strandat 3063.028 kb on - strandat 3063.028 kb on - strandat 3063.109 kb on + strand, within A4249_RS15160at 3063.109 kb on + strand, within A4249_RS15160at 3063.110 kb on - strand, within A4249_RS15160at 3063.110 kb on - strand, within A4249_RS15160at 3063.110 kb on - strand, within A4249_RS15160at 3063.110 kb on - strand, within A4249_RS15160at 3063.110 kb on - strand, within A4249_RS15160at 3063.110 kb on - strand, within A4249_RS15160at 3063.133 kb on + strand, within A4249_RS15160at 3063.133 kb on + strand, within A4249_RS15160at 3063.134 kb on - strand, within A4249_RS15160at 3063.172 kb on + strand, within A4249_RS15160at 3063.172 kb on + strand, within A4249_RS15160at 3063.172 kb on + strand, within A4249_RS15160at 3063.172 kb on + strand, within A4249_RS15160at 3063.172 kb on + strand, within A4249_RS15160at 3063.172 kb on + strand, within A4249_RS15160at 3063.172 kb on + strand, within A4249_RS15160at 3063.173 kb on - strand, within A4249_RS15160at 3063.173 kb on - strand, within A4249_RS15160at 3063.173 kb on - strand, within A4249_RS15160at 3063.173 kb on - strand, within A4249_RS15160at 3063.208 kb on + strand, within A4249_RS15160at 3063.208 kb on + strand, within A4249_RS15160at 3063.208 kb on + strand, within A4249_RS15160at 3063.208 kb on + strand, within A4249_RS15160at 3063.208 kb on + strand, within A4249_RS15160at 3063.209 kb on - strand, within A4249_RS15160at 3063.346 kb on + strand, within A4249_RS15160at 3063.880 kb on - strandat 3063.883 kb on - strandat 3063.893 kb on + strandat 3063.893 kb on + strandat 3063.893 kb on + strandat 3063.893 kb on + strandat 3063.893 kb on + strandat 3063.893 kb on + strandat 3063.893 kb on + strandat 3063.893 kb on + strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strandat 3063.894 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 20C
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3,061,194 + -2.5
3,061,195 - -0.6
3,061,195 - -1.2
3,061,195 - -0.2
3,061,207 - -0.7
3,061,207 - +1.0
3,061,212 + +0.3
3,061,399 - +0.9
3,061,703 + A4249_RS15150 0.61 -0.2
3,061,704 - A4249_RS15150 0.62 +0.0
3,061,704 - A4249_RS15150 0.62 +3.0
3,061,704 - A4249_RS15150 0.62 -2.0
3,061,880 + +1.0
3,062,255 + A4249_RS15155 0.10 -1.5
3,062,288 + A4249_RS15155 0.14 -0.7
3,062,288 + A4249_RS15155 0.14 +0.6
3,062,289 - A4249_RS15155 0.14 +0.1
3,062,289 - A4249_RS15155 0.14 -0.4
3,062,289 - A4249_RS15155 0.14 -0.8
3,062,289 - A4249_RS15155 0.14 -0.6
3,062,289 - A4249_RS15155 0.14 -0.4
3,062,338 + A4249_RS15155 0.21 -1.1
3,062,338 + A4249_RS15155 0.21 -1.2
3,062,338 + A4249_RS15155 0.21 -0.6
3,062,338 + A4249_RS15155 0.21 -1.5
3,062,338 + A4249_RS15155 0.21 -3.3
3,062,339 - A4249_RS15155 0.21 -1.2
3,062,339 - A4249_RS15155 0.21 -0.8
3,062,339 - A4249_RS15155 0.21 +0.3
3,062,378 - A4249_RS15155 0.26 +0.0
3,062,386 + A4249_RS15155 0.27 +0.0
3,062,386 + A4249_RS15155 0.27 -0.6
3,062,386 + A4249_RS15155 0.27 +0.5
3,062,386 + A4249_RS15155 0.27 -0.6
3,062,387 - A4249_RS15155 0.27 -0.7
3,062,387 - A4249_RS15155 0.27 -0.3
3,062,387 - A4249_RS15155 0.27 -0.3
3,062,387 - A4249_RS15155 0.27 +1.5
3,062,500 + A4249_RS15155 0.41 -1.0
3,063,027 + -1.7
3,063,027 + +0.8
3,063,028 - -0.7
3,063,028 - -1.0
3,063,028 - +1.7
3,063,028 - +2.0
3,063,028 - -0.6
3,063,028 - +0.4
3,063,028 - +0.9
3,063,028 - +2.6
3,063,109 + A4249_RS15160 0.10 -1.0
3,063,109 + A4249_RS15160 0.10 +0.5
3,063,110 - A4249_RS15160 0.10 +0.2
3,063,110 - A4249_RS15160 0.10 +0.6
3,063,110 - A4249_RS15160 0.10 -2.0
3,063,110 - A4249_RS15160 0.10 -1.6
3,063,110 - A4249_RS15160 0.10 +0.7
3,063,110 - A4249_RS15160 0.10 +0.4
3,063,133 + A4249_RS15160 0.13 +2.0
3,063,133 + A4249_RS15160 0.13 -1.4
3,063,134 - A4249_RS15160 0.13 +0.3
3,063,172 + A4249_RS15160 0.18 +0.8
3,063,172 + A4249_RS15160 0.18 +0.4
3,063,172 + A4249_RS15160 0.18 +0.4
3,063,172 + A4249_RS15160 0.18 +0.4
3,063,172 + A4249_RS15160 0.18 +0.2
3,063,172 + A4249_RS15160 0.18 -4.0
3,063,172 + A4249_RS15160 0.18 -0.9
3,063,173 - A4249_RS15160 0.18 +0.5
3,063,173 - A4249_RS15160 0.18 +0.4
3,063,173 - A4249_RS15160 0.18 +0.0
3,063,173 - A4249_RS15160 0.18 +0.0
3,063,208 + A4249_RS15160 0.23 -0.5
3,063,208 + A4249_RS15160 0.23 -3.3
3,063,208 + A4249_RS15160 0.23 -0.4
3,063,208 + A4249_RS15160 0.23 +0.9
3,063,208 + A4249_RS15160 0.23 -1.0
3,063,209 - A4249_RS15160 0.23 -1.3
3,063,346 + A4249_RS15160 0.41 -0.5
3,063,880 - -0.4
3,063,883 - +1.5
3,063,893 + -0.2
3,063,893 + -1.4
3,063,893 + +0.0
3,063,893 + +1.0
3,063,893 + +0.2
3,063,893 + +1.0
3,063,893 + +0.1
3,063,893 + +0.0
3,063,894 - +2.8
3,063,894 - -0.2
3,063,894 - +0.1
3,063,894 - -0.3
3,063,894 - -0.1
3,063,894 - +0.9
3,063,894 - +0.8
3,063,894 - +0.0
3,063,894 - +0.1
3,063,894 - -1.2

Or see this region's nucleotide sequence