Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13260

Experiment: Tween 20 (C), 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13255 and A4249_RS13260 are separated by 37 nucleotidesA4249_RS13260 and A4249_RS13265 are separated by 37 nucleotides A4249_RS13255: A4249_RS13255 - threonine/serine dehydratase, at 2,672,464 to 2,673,444 _RS13255 A4249_RS13260: A4249_RS13260 - glycerol kinase GlpK, at 2,673,482 to 2,675,011 _RS13260 A4249_RS13265: A4249_RS13265 - phosphotransferase family protein, at 2,675,049 to 2,676,125 _RS13265 Position (kb) 2673 2674 2675 2676Strain fitness (log2 ratio) -2 -1 0 1 2 3at 2672.498 kb on + strandat 2672.499 kb on - strandat 2672.499 kb on - strandat 2672.499 kb on - strandat 2673.074 kb on + strand, within A4249_RS13255at 2673.074 kb on + strand, within A4249_RS13255at 2673.075 kb on - strand, within A4249_RS13255at 2673.075 kb on - strand, within A4249_RS13255at 2673.075 kb on - strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.266 kb on + strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.267 kb on - strand, within A4249_RS13255at 2673.321 kb on + strand, within A4249_RS13255at 2673.322 kb on - strand, within A4249_RS13255at 2673.322 kb on - strand, within A4249_RS13255at 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.422 kb on + strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.423 kb on - strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.444 kb on + strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.445 kb on - strandat 2673.918 kb on - strand, within A4249_RS13260at 2673.918 kb on - strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.304 kb on + strand, within A4249_RS13260at 2674.305 kb on - strand, within A4249_RS13260at 2674.305 kb on - strand, within A4249_RS13260at 2674.409 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.538 kb on + strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.539 kb on - strand, within A4249_RS13260at 2674.540 kb on + strand, within A4249_RS13260at 2674.540 kb on + strand, within A4249_RS13260at 2674.540 kb on + strand, within A4249_RS13260at 2674.540 kb on + strand, within A4249_RS13260at 2674.540 kb on + strand, within A4249_RS13260at 2674.541 kb on - strand, within A4249_RS13260at 2674.541 kb on - strand, within A4249_RS13260at 2674.541 kb on - strand, within A4249_RS13260at 2674.541 kb on - strand, within A4249_RS13260at 2674.641 kb on + strand, within A4249_RS13260at 2674.641 kb on + strand, within A4249_RS13260at 2674.668 kb on - strand, within A4249_RS13260at 2675.169 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.223 kb on + strand, within A4249_RS13265at 2675.224 kb on - strand, within A4249_RS13265at 2675.224 kb on - strand, within A4249_RS13265at 2675.224 kb on - strand, within A4249_RS13265at 2675.224 kb on - strand, within A4249_RS13265at 2675.250 kb on + strand, within A4249_RS13265at 2675.250 kb on + strand, within A4249_RS13265at 2675.250 kb on + strand, within A4249_RS13265at 2675.250 kb on + strand, within A4249_RS13265at 2675.250 kb on + strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.251 kb on - strand, within A4249_RS13265at 2675.371 kb on + strand, within A4249_RS13265at 2675.372 kb on - strand, within A4249_RS13265at 2675.372 kb on - strand, within A4249_RS13265at 2675.406 kb on + strand, within A4249_RS13265at 2675.406 kb on + strand, within A4249_RS13265at 2675.406 kb on + strand, within A4249_RS13265at 2675.406 kb on + strand, within A4249_RS13265at 2675.406 kb on + strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.407 kb on - strand, within A4249_RS13265at 2675.485 kb on + strand, within A4249_RS13265at 2675.485 kb on + strand, within A4249_RS13265at 2675.485 kb on + strand, within A4249_RS13265at 2675.485 kb on + strand, within A4249_RS13265at 2675.486 kb on - strand, within A4249_RS13265at 2675.486 kb on - strand, within A4249_RS13265at 2675.486 kb on - strand, within A4249_RS13265at 2675.486 kb on - strand, within A4249_RS13265at 2675.486 kb on - strand, within A4249_RS13265at 2675.487 kb on + strand, within A4249_RS13265at 2675.487 kb on + strand, within A4249_RS13265at 2675.487 kb on + strand, within A4249_RS13265at 2675.487 kb on + strand, within A4249_RS13265at 2675.487 kb on + strand, within A4249_RS13265at 2675.487 kb on + strand, within A4249_RS13265at 2675.487 kb on + strand, within A4249_RS13265at 2675.488 kb on - strand, within A4249_RS13265at 2675.488 kb on - strand, within A4249_RS13265at 2675.488 kb on - strand, within A4249_RS13265at 2675.488 kb on - strand, within A4249_RS13265at 2675.488 kb on - strand, within A4249_RS13265at 2675.488 kb on - strand, within A4249_RS13265at 2675.574 kb on + strand, within A4249_RS13265at 2675.574 kb on + strand, within A4249_RS13265at 2675.574 kb on + strand, within A4249_RS13265at 2675.574 kb on + strand, within A4249_RS13265at 2675.575 kb on - strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.610 kb on + strand, within A4249_RS13265at 2675.611 kb on - strand, within A4249_RS13265at 2675.611 kb on - strand, within A4249_RS13265at 2675.611 kb on - strand, within A4249_RS13265at 2675.817 kb on + strand, within A4249_RS13265at 2675.817 kb on + strand, within A4249_RS13265at 2675.817 kb on + strand, within A4249_RS13265at 2675.818 kb on - strand, within A4249_RS13265at 2675.818 kb on - strand, within A4249_RS13265at 2675.818 kb on - strand, within A4249_RS13265at 2675.818 kb on - strand, within A4249_RS13265at 2675.922 kb on + strand, within A4249_RS13265at 2675.967 kb on + strand, within A4249_RS13265at 2675.968 kb on - strand, within A4249_RS13265at 2675.968 kb on - strand, within A4249_RS13265at 2675.973 kb on + strand, within A4249_RS13265at 2675.973 kb on + strand, within A4249_RS13265at 2675.973 kb on + strand, within A4249_RS13265at 2675.973 kb on + strand, within A4249_RS13265at 2675.974 kb on - strand, within A4249_RS13265at 2675.974 kb on - strand, within A4249_RS13265

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 20C
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2,672,498 + -0.1
2,672,499 - +1.2
2,672,499 - -0.7
2,672,499 - +0.1
2,673,074 + A4249_RS13255 0.62 -0.5
2,673,074 + A4249_RS13255 0.62 +0.1
2,673,075 - A4249_RS13255 0.62 +0.1
2,673,075 - A4249_RS13255 0.62 +0.8
2,673,075 - A4249_RS13255 0.62 +0.2
2,673,266 + A4249_RS13255 0.82 +1.4
2,673,266 + A4249_RS13255 0.82 -0.3
2,673,266 + A4249_RS13255 0.82 +0.3
2,673,266 + A4249_RS13255 0.82 -0.0
2,673,266 + A4249_RS13255 0.82 -0.5
2,673,266 + A4249_RS13255 0.82 -0.3
2,673,266 + A4249_RS13255 0.82 +1.5
2,673,267 - A4249_RS13255 0.82 +0.3
2,673,267 - A4249_RS13255 0.82 -0.3
2,673,267 - A4249_RS13255 0.82 -0.8
2,673,267 - A4249_RS13255 0.82 -0.0
2,673,267 - A4249_RS13255 0.82 +0.5
2,673,267 - A4249_RS13255 0.82 -0.4
2,673,321 + A4249_RS13255 0.87 +0.7
2,673,322 - A4249_RS13255 0.87 -0.3
2,673,322 - A4249_RS13255 0.87 +1.3
2,673,422 + +0.1
2,673,422 + +0.5
2,673,422 + -0.4
2,673,422 + +1.6
2,673,422 + +1.1
2,673,422 + +1.4
2,673,422 + -0.3
2,673,422 + +0.4
2,673,422 + +0.3
2,673,422 + +0.7
2,673,423 - +0.4
2,673,423 - +1.8
2,673,423 - +0.1
2,673,423 - -0.3
2,673,423 - -0.0
2,673,423 - +0.7
2,673,423 - -0.5
2,673,444 + +0.8
2,673,444 + -1.5
2,673,444 + +0.7
2,673,444 + +0.6
2,673,444 + +0.4
2,673,444 + +0.1
2,673,444 + -0.5
2,673,444 + +1.2
2,673,444 + +0.5
2,673,444 + -0.1
2,673,444 + +1.1
2,673,444 + -0.3
2,673,444 + +1.1
2,673,444 + -0.9
2,673,444 + +0.1
2,673,445 - +0.6
2,673,445 - +0.7
2,673,445 - +0.5
2,673,445 - +1.4
2,673,445 - -1.1
2,673,445 - +0.8
2,673,445 - +0.1
2,673,445 - -0.2
2,673,445 - +0.8
2,673,445 - +1.2
2,673,918 - A4249_RS13260 0.28 +0.4
2,673,918 - A4249_RS13260 0.28 -2.3
2,674,304 + A4249_RS13260 0.54 -0.7
2,674,304 + A4249_RS13260 0.54 -0.9
2,674,304 + A4249_RS13260 0.54 -0.7
2,674,304 + A4249_RS13260 0.54 +0.1
2,674,304 + A4249_RS13260 0.54 +0.4
2,674,305 - A4249_RS13260 0.54 -0.2
2,674,305 - A4249_RS13260 0.54 +0.1
2,674,409 + A4249_RS13260 0.61 -0.1
2,674,538 + A4249_RS13260 0.69 -0.3
2,674,538 + A4249_RS13260 0.69 +0.6
2,674,538 + A4249_RS13260 0.69 +0.1
2,674,538 + A4249_RS13260 0.69 +0.1
2,674,538 + A4249_RS13260 0.69 +1.1
2,674,538 + A4249_RS13260 0.69 -1.5
2,674,538 + A4249_RS13260 0.69 +2.4
2,674,538 + A4249_RS13260 0.69 -0.4
2,674,538 + A4249_RS13260 0.69 +1.1
2,674,538 + A4249_RS13260 0.69 -0.6
2,674,538 + A4249_RS13260 0.69 -0.7
2,674,538 + A4249_RS13260 0.69 +1.1
2,674,538 + A4249_RS13260 0.69 -0.2
2,674,538 + A4249_RS13260 0.69 +0.5
2,674,538 + A4249_RS13260 0.69 -1.6
2,674,539 - A4249_RS13260 0.69 +0.1
2,674,539 - A4249_RS13260 0.69 -0.2
2,674,539 - A4249_RS13260 0.69 +0.0
2,674,539 - A4249_RS13260 0.69 +0.0
2,674,539 - A4249_RS13260 0.69 -0.9
2,674,539 - A4249_RS13260 0.69 +0.6
2,674,539 - A4249_RS13260 0.69 -0.7
2,674,539 - A4249_RS13260 0.69 +1.0
2,674,539 - A4249_RS13260 0.69 -0.6
2,674,539 - A4249_RS13260 0.69 -0.5
2,674,539 - A4249_RS13260 0.69 -1.6
2,674,539 - A4249_RS13260 0.69 +0.3
2,674,539 - A4249_RS13260 0.69 -0.2
2,674,539 - A4249_RS13260 0.69 -0.1
2,674,539 - A4249_RS13260 0.69 -0.4
2,674,539 - A4249_RS13260 0.69 +0.5
2,674,540 + A4249_RS13260 0.69 -1.5
2,674,540 + A4249_RS13260 0.69 +0.4
2,674,540 + A4249_RS13260 0.69 -0.2
2,674,540 + A4249_RS13260 0.69 -0.5
2,674,540 + A4249_RS13260 0.69 +1.1
2,674,541 - A4249_RS13260 0.69 +0.6
2,674,541 - A4249_RS13260 0.69 +0.4
2,674,541 - A4249_RS13260 0.69 -0.5
2,674,541 - A4249_RS13260 0.69 +0.2
2,674,641 + A4249_RS13260 0.76 -0.5
2,674,641 + A4249_RS13260 0.76 +0.3
2,674,668 - A4249_RS13260 0.78 +0.1
2,675,169 + A4249_RS13265 0.11 -0.2
2,675,223 + A4249_RS13265 0.16 -1.1
2,675,223 + A4249_RS13265 0.16 +0.2
2,675,223 + A4249_RS13265 0.16 +0.9
2,675,223 + A4249_RS13265 0.16 +1.4
2,675,223 + A4249_RS13265 0.16 +1.2
2,675,223 + A4249_RS13265 0.16 -0.1
2,675,223 + A4249_RS13265 0.16 +1.1
2,675,223 + A4249_RS13265 0.16 -0.3
2,675,224 - A4249_RS13265 0.16 +0.2
2,675,224 - A4249_RS13265 0.16 +0.1
2,675,224 - A4249_RS13265 0.16 +0.3
2,675,224 - A4249_RS13265 0.16 +1.5
2,675,250 + A4249_RS13265 0.19 +1.6
2,675,250 + A4249_RS13265 0.19 +0.1
2,675,250 + A4249_RS13265 0.19 +0.1
2,675,250 + A4249_RS13265 0.19 +1.0
2,675,250 + A4249_RS13265 0.19 -0.0
2,675,251 - A4249_RS13265 0.19 -0.3
2,675,251 - A4249_RS13265 0.19 +0.3
2,675,251 - A4249_RS13265 0.19 +1.1
2,675,251 - A4249_RS13265 0.19 +0.3
2,675,251 - A4249_RS13265 0.19 +1.6
2,675,251 - A4249_RS13265 0.19 +0.2
2,675,251 - A4249_RS13265 0.19 -0.4
2,675,251 - A4249_RS13265 0.19 +0.3
2,675,251 - A4249_RS13265 0.19 +0.4
2,675,371 + A4249_RS13265 0.30 +0.5
2,675,372 - A4249_RS13265 0.30 -0.6
2,675,372 - A4249_RS13265 0.30 -0.1
2,675,406 + A4249_RS13265 0.33 +1.4
2,675,406 + A4249_RS13265 0.33 +0.5
2,675,406 + A4249_RS13265 0.33 +0.0
2,675,406 + A4249_RS13265 0.33 -0.7
2,675,406 + A4249_RS13265 0.33 +0.7
2,675,407 - A4249_RS13265 0.33 -1.9
2,675,407 - A4249_RS13265 0.33 -0.3
2,675,407 - A4249_RS13265 0.33 +0.1
2,675,407 - A4249_RS13265 0.33 -1.9
2,675,407 - A4249_RS13265 0.33 -0.9
2,675,407 - A4249_RS13265 0.33 -0.7
2,675,407 - A4249_RS13265 0.33 -0.0
2,675,407 - A4249_RS13265 0.33 -0.2
2,675,407 - A4249_RS13265 0.33 -0.7
2,675,407 - A4249_RS13265 0.33 +1.4
2,675,407 - A4249_RS13265 0.33 +0.6
2,675,485 + A4249_RS13265 0.40 -0.8
2,675,485 + A4249_RS13265 0.40 -0.7
2,675,485 + A4249_RS13265 0.40 +0.5
2,675,485 + A4249_RS13265 0.40 +0.8
2,675,486 - A4249_RS13265 0.41 +1.1
2,675,486 - A4249_RS13265 0.41 +0.1
2,675,486 - A4249_RS13265 0.41 +1.6
2,675,486 - A4249_RS13265 0.41 +0.1
2,675,486 - A4249_RS13265 0.41 +0.1
2,675,487 + A4249_RS13265 0.41 -0.7
2,675,487 + A4249_RS13265 0.41 -1.7
2,675,487 + A4249_RS13265 0.41 +0.4
2,675,487 + A4249_RS13265 0.41 +0.1
2,675,487 + A4249_RS13265 0.41 -0.3
2,675,487 + A4249_RS13265 0.41 -0.5
2,675,487 + A4249_RS13265 0.41 -0.9
2,675,488 - A4249_RS13265 0.41 +0.4
2,675,488 - A4249_RS13265 0.41 -0.0
2,675,488 - A4249_RS13265 0.41 +0.1
2,675,488 - A4249_RS13265 0.41 -0.2
2,675,488 - A4249_RS13265 0.41 -1.3
2,675,488 - A4249_RS13265 0.41 -1.4
2,675,574 + A4249_RS13265 0.49 -1.9
2,675,574 + A4249_RS13265 0.49 +0.8
2,675,574 + A4249_RS13265 0.49 -0.6
2,675,574 + A4249_RS13265 0.49 -0.5
2,675,575 - A4249_RS13265 0.49 -0.7
2,675,610 + A4249_RS13265 0.52 -1.4
2,675,610 + A4249_RS13265 0.52 -0.4
2,675,610 + A4249_RS13265 0.52 +0.6
2,675,610 + A4249_RS13265 0.52 +0.6
2,675,610 + A4249_RS13265 0.52 +0.7
2,675,610 + A4249_RS13265 0.52 +0.2
2,675,610 + A4249_RS13265 0.52 +1.2
2,675,610 + A4249_RS13265 0.52 -0.9
2,675,611 - A4249_RS13265 0.52 +0.3
2,675,611 - A4249_RS13265 0.52 +0.9
2,675,611 - A4249_RS13265 0.52 -0.4
2,675,817 + A4249_RS13265 0.71 +0.1
2,675,817 + A4249_RS13265 0.71 +0.3
2,675,817 + A4249_RS13265 0.71 +0.5
2,675,818 - A4249_RS13265 0.71 +3.5
2,675,818 - A4249_RS13265 0.71 +0.2
2,675,818 - A4249_RS13265 0.71 +0.9
2,675,818 - A4249_RS13265 0.71 +0.1
2,675,922 + A4249_RS13265 0.81 -0.1
2,675,967 + A4249_RS13265 0.85 +1.1
2,675,968 - A4249_RS13265 0.85 +0.5
2,675,968 - A4249_RS13265 0.85 -2.7
2,675,973 + A4249_RS13265 0.86 -0.3
2,675,973 + A4249_RS13265 0.86 -0.9
2,675,973 + A4249_RS13265 0.86 -0.9
2,675,973 + A4249_RS13265 0.86 -1.7
2,675,974 - A4249_RS13265 0.86 -0.4
2,675,974 - A4249_RS13265 0.86 -0.9

Or see this region's nucleotide sequence