Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS11955

Experiment: Tween 20 (C), 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	Tween 20 (C), 20C
2,399,932	+		A4249_RS11945	0.81	-2.3
2,399,932	+		A4249_RS11945	0.81	-1.8
2,399,932	+		A4249_RS11945	0.81	-3.2
2,400,026	-				+0.0
2,400,031	+				+0.5
2,400,031	+				+0.2
2,400,124	+				-0.1
2,400,124	+				-0.0
2,400,124	+				+0.9
2,400,124	+				-0.3
2,400,125	-				+0.6
2,400,125	-				-0.7
2,400,279	-				-0.5
2,400,279	-				-0.9
2,400,279	-				-0.2
2,400,279	-				+0.3
2,400,335	+		A4249_RS11950	0.21	+0.8
2,400,335	+		A4249_RS11950	0.21	-0.2
2,400,335	+		A4249_RS11950	0.21	+0.1
2,400,335	+		A4249_RS11950	0.21	-0.0
2,400,335	+		A4249_RS11950	0.21	+1.2
2,400,335	+		A4249_RS11950	0.21	-1.5
2,400,335	+		A4249_RS11950	0.21	+0.4
2,400,335	+		A4249_RS11950	0.21	+0.7
2,400,335	+		A4249_RS11950	0.21	-1.6
2,400,336	-		A4249_RS11950	0.21	+0.0
2,400,336	-		A4249_RS11950	0.21	+0.0
2,400,336	-		A4249_RS11950	0.21	-0.2
2,400,336	-		A4249_RS11950	0.21	-0.1
2,400,336	-		A4249_RS11950	0.21	-0.6
2,400,337	+		A4249_RS11950	0.22	-1.4
2,400,337	+		A4249_RS11950	0.22	+0.4
2,400,337	+		A4249_RS11950	0.22	-0.6
2,400,337	+		A4249_RS11950	0.22	-0.1
2,400,337	+		A4249_RS11950	0.22	+1.2
2,400,337	+		A4249_RS11950	0.22	-0.2
2,400,337	+		A4249_RS11950	0.22	-0.3
2,400,338	-		A4249_RS11950	0.22	+0.0
2,400,338	-		A4249_RS11950	0.22	+0.0
2,400,338	-		A4249_RS11950	0.22	-1.0
2,400,338	-		A4249_RS11950	0.22	+0.6
2,400,338	-		A4249_RS11950	0.22	-0.3
2,400,338	-		A4249_RS11950	0.22	+0.5
2,400,338	-		A4249_RS11950	0.22	-0.3
2,400,338	-		A4249_RS11950	0.22	-0.3
2,400,338	-		A4249_RS11950	0.22	-0.4
2,400,338	-		A4249_RS11950	0.22	-2.3
2,400,338	-		A4249_RS11950	0.22	+0.2
2,400,338	-		A4249_RS11950	0.22	+0.7
2,400,338	-		A4249_RS11950	0.22	-0.3
2,400,338	-		A4249_RS11950	0.22	-0.7
2,400,338	-		A4249_RS11950	0.22	-1.2
2,400,340	+		A4249_RS11950	0.22	-0.7
2,400,340	+		A4249_RS11950	0.22	-0.1
2,400,340	+		A4249_RS11950	0.22	-0.4
2,400,341	-		A4249_RS11950	0.23	-0.4
2,400,341	-		A4249_RS11950	0.23	-0.8
2,400,341	-		A4249_RS11950	0.23	+1.0
2,400,341	-		A4249_RS11950	0.23	-0.1
2,400,341	-		A4249_RS11950	0.23	+0.3
2,400,341	-		A4249_RS11950	0.23	-0.4
2,400,341	-		A4249_RS11950	0.23	-0.8
2,400,341	-		A4249_RS11950	0.23	+0.3
2,400,397	+		A4249_RS11950	0.36	-0.4
2,400,397	+		A4249_RS11950	0.36	+0.7
2,400,397	+		A4249_RS11950	0.36	-0.5
2,400,397	+		A4249_RS11950	0.36	-0.5
2,400,398	-		A4249_RS11950	0.37	+0.3
2,400,398	-		A4249_RS11950	0.37	+0.5
2,400,398	-		A4249_RS11950	0.37	-0.8
2,400,398	-		A4249_RS11950	0.37	-2.1
2,400,414	+		A4249_RS11950	0.40	+1.3
2,400,414	+		A4249_RS11950	0.40	-1.1
2,400,414	+		A4249_RS11950	0.40	+0.0
2,400,415	-		A4249_RS11950	0.41	+0.7
2,400,501	+		A4249_RS11950	0.62	-0.6
2,400,501	+		A4249_RS11950	0.62	-1.0
2,400,501	+		A4249_RS11950	0.62	+1.6
2,400,501	+		A4249_RS11950	0.62	+0.2
2,400,501	+		A4249_RS11950	0.62	-0.3
2,400,502	-		A4249_RS11950	0.62	-0.4
2,400,502	-		A4249_RS11950	0.62	-0.2
2,400,502	-		A4249_RS11950	0.62	-0.1
2,400,544	+		A4249_RS11950	0.72	+2.0
2,400,544	+		A4249_RS11950	0.72	-0.4
2,400,544	+		A4249_RS11950	0.72	+0.6
2,400,545	-		A4249_RS11950	0.73	-0.2
2,400,545	-		A4249_RS11950	0.73	+0.5
2,400,545	-		A4249_RS11950	0.73	-1.0
2,400,592	+		A4249_RS11950	0.84	+0.9
2,400,593	-		A4249_RS11950	0.84	-0.1
2,400,636	-				-1.2
2,400,637	+				+0.4
2,400,638	-				-0.2
2,400,638	-				+0.4
2,400,638	-				-1.4
2,400,661	+				+0.0
2,400,661	+				+2.3
2,400,661	+				+0.7
2,400,661	+				-0.2
2,400,661	+				-0.9
2,400,661	+				-0.7
2,400,661	+				+1.2
2,400,662	-				+0.0
2,400,662	-				-1.7
2,400,662	-				-3.2
2,400,662	-				-0.9
2,400,662	-				-1.2
2,400,662	-				-0.4
2,400,662	-				-1.1
2,400,663	+				-0.6
2,400,663	+				+0.3
2,400,663	+				+0.7
2,400,663	+				+0.0
2,400,663	+				+0.0
2,400,664	-				-2.8
2,400,664	-				+0.0
2,400,664	-				+0.3
2,400,664	-				+0.0
2,400,664	-				-0.2
2,400,664	-				-0.7
2,400,664	-				+1.3
2,400,664	-				+0.4
2,400,664	-				+0.8
2,401,837	+				-0.5
2,401,848	+				+0.2
2,401,849	-				+1.0
2,401,849	-				+2.0
2,401,865	+				+0.1
2,401,865	+				-0.3
2,401,865	+				-1.6
2,401,865	+				+0.1
2,401,865	+				-0.6
2,401,866	-				+1.8
2,401,866	-				+0.5
2,401,866	-				+1.9
2,401,866	-				+0.0
2,401,866	-				-0.2
2,402,323	+		A4249_RS11960	0.30	-0.3
2,402,323	+		A4249_RS11960	0.30	-0.7
2,402,323	+		A4249_RS11960	0.30	-0.7
2,402,323	+		A4249_RS11960	0.30	+0.0
2,402,323	+		A4249_RS11960	0.30	-1.2
2,402,323	+		A4249_RS11960	0.30	-2.6
2,402,323	+		A4249_RS11960	0.30	-0.4
2,402,324	-		A4249_RS11960	0.30	+2.1
2,402,324	-		A4249_RS11960	0.30	-0.7
2,402,324	-		A4249_RS11960	0.30	-0.6
2,402,324	-		A4249_RS11960	0.30	+1.1
2,402,324	-		A4249_RS11960	0.30	-1.0
2,402,324	-		A4249_RS11960	0.30	-1.0
2,402,324	-		A4249_RS11960	0.30	-0.0
2,402,324	-		A4249_RS11960	0.30	-1.0
2,402,324	-		A4249_RS11960	0.30	-0.1
2,402,324	-		A4249_RS11960	0.30	-0.1
2,402,500	+		A4249_RS11960	0.44	+1.0
2,402,500	+		A4249_RS11960	0.44	-0.0
2,402,500	+		A4249_RS11960	0.44	-0.8
2,402,500	+		A4249_RS11960	0.44	-1.0
2,402,500	+		A4249_RS11960	0.44	-2.0
2,402,500	+		A4249_RS11960	0.44	-3.0
2,402,500	+		A4249_RS11960	0.44	+1.1
2,402,500	+		A4249_RS11960	0.44	+0.1
2,402,500	+		A4249_RS11960	0.44	+1.0
2,402,500	+		A4249_RS11960	0.44	+1.0
2,402,500	+		A4249_RS11960	0.44	-0.7
2,402,501	-		A4249_RS11960	0.44	-0.2
2,402,501	-		A4249_RS11960	0.44	+0.6
2,402,501	-		A4249_RS11960	0.44	+0.1
2,402,501	-		A4249_RS11960	0.44	+0.8
2,402,501	-		A4249_RS11960	0.44	-1.1
2,402,501	-		A4249_RS11960	0.44	+0.1
2,402,626	+		A4249_RS11960	0.54	-0.5
2,402,627	-		A4249_RS11960	0.54	-0.7