Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10640

Experiment: Tween 20 (C), 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS10630 and A4249_RS10635 are separated by 10 nucleotidesA4249_RS10635 and A4249_RS10640 are separated by 11 nucleotidesA4249_RS10640 and A4249_RS10645 are separated by 11 nucleotidesA4249_RS10645 and A4249_RS10650 are separated by 67 nucleotides A4249_RS10630: A4249_RS10630 - FAD:protein FMN transferase, at 2,136,724 to 2,137,830 _RS10630 A4249_RS10635: A4249_RS10635 - DUF4198 domain-containing protein, at 2,137,841 to 2,138,641 _RS10635 A4249_RS10640: A4249_RS10640 - DUF2271 domain-containing protein, at 2,138,653 to 2,139,165 _RS10640 A4249_RS10645: A4249_RS10645 - PepSY-associated TM helix domain-containing protein, at 2,139,177 to 2,139,854 _RS10645 A4249_RS10650: A4249_RS10650 - Fe2+-dependent dioxygenase, at 2,139,922 to 2,140,608 _RS10650 Position (kb) 2138 2139 2140Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2137.842 kb on + strandat 2137.869 kb on + strandat 2137.869 kb on + strandat 2137.869 kb on + strandat 2137.869 kb on + strandat 2137.869 kb on + strandat 2137.869 kb on + strandat 2137.869 kb on + strandat 2137.869 kb on + strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.870 kb on - strandat 2137.932 kb on + strand, within A4249_RS10635at 2137.932 kb on + strand, within A4249_RS10635at 2137.932 kb on + strand, within A4249_RS10635at 2137.932 kb on + strand, within A4249_RS10635at 2137.932 kb on + strand, within A4249_RS10635at 2137.932 kb on + strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2137.933 kb on - strand, within A4249_RS10635at 2138.263 kb on - strand, within A4249_RS10635at 2138.310 kb on + strand, within A4249_RS10635at 2138.310 kb on + strand, within A4249_RS10635at 2138.310 kb on + strand, within A4249_RS10635at 2138.310 kb on + strand, within A4249_RS10635at 2138.310 kb on + strand, within A4249_RS10635at 2138.310 kb on + strand, within A4249_RS10635at 2138.310 kb on + strand, within A4249_RS10635at 2138.311 kb on - strand, within A4249_RS10635at 2138.311 kb on - strand, within A4249_RS10635at 2138.311 kb on - strand, within A4249_RS10635at 2138.311 kb on - strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.349 kb on + strand, within A4249_RS10635at 2138.350 kb on - strand, within A4249_RS10635at 2138.350 kb on - strand, within A4249_RS10635at 2138.350 kb on - strand, within A4249_RS10635at 2138.350 kb on - strand, within A4249_RS10635at 2138.350 kb on - strand, within A4249_RS10635at 2138.350 kb on - strand, within A4249_RS10635at 2138.792 kb on + strand, within A4249_RS10640at 2138.792 kb on + strand, within A4249_RS10640at 2138.792 kb on + strand, within A4249_RS10640at 2138.792 kb on + strand, within A4249_RS10640at 2138.792 kb on + strand, within A4249_RS10640at 2138.793 kb on - strand, within A4249_RS10640at 2138.978 kb on + strand, within A4249_RS10640at 2138.979 kb on - strand, within A4249_RS10640at 2138.979 kb on - strand, within A4249_RS10640at 2139.038 kb on + strand, within A4249_RS10640at 2139.038 kb on + strand, within A4249_RS10640at 2139.038 kb on + strand, within A4249_RS10640at 2139.039 kb on - strand, within A4249_RS10640at 2139.039 kb on - strand, within A4249_RS10640at 2139.039 kb on - strand, within A4249_RS10640at 2139.051 kb on - strand, within A4249_RS10640at 2139.380 kb on - strand, within A4249_RS10645at 2139.380 kb on - strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.478 kb on + strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.479 kb on - strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.639 kb on + strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.640 kb on - strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.749 kb on + strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.750 kb on - strand, within A4249_RS10645at 2139.897 kb on + strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 20C
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2,137,842 + -0.1
2,137,869 + -2.0
2,137,869 + +0.7
2,137,869 + +1.2
2,137,869 + +0.1
2,137,869 + -0.2
2,137,869 + +0.7
2,137,869 + -0.3
2,137,869 + -1.8
2,137,870 - -0.2
2,137,870 - +1.0
2,137,870 - -0.1
2,137,870 - -0.2
2,137,870 - -0.0
2,137,870 - +1.7
2,137,870 - -1.0
2,137,870 - +1.0
2,137,870 - -1.1
2,137,870 - -0.5
2,137,870 - +0.1
2,137,870 - +0.3
2,137,870 - +1.8
2,137,870 - -0.0
2,137,932 + A4249_RS10635 0.11 -0.2
2,137,932 + A4249_RS10635 0.11 -0.0
2,137,932 + A4249_RS10635 0.11 -1.0
2,137,932 + A4249_RS10635 0.11 +0.4
2,137,932 + A4249_RS10635 0.11 -0.1
2,137,932 + A4249_RS10635 0.11 +1.2
2,137,933 - A4249_RS10635 0.11 -0.5
2,137,933 - A4249_RS10635 0.11 +0.4
2,137,933 - A4249_RS10635 0.11 -0.0
2,137,933 - A4249_RS10635 0.11 -0.4
2,137,933 - A4249_RS10635 0.11 -1.1
2,137,933 - A4249_RS10635 0.11 +1.2
2,137,933 - A4249_RS10635 0.11 +0.6
2,137,933 - A4249_RS10635 0.11 -1.6
2,138,263 - A4249_RS10635 0.53 +0.2
2,138,310 + A4249_RS10635 0.59 -0.8
2,138,310 + A4249_RS10635 0.59 -2.1
2,138,310 + A4249_RS10635 0.59 -0.4
2,138,310 + A4249_RS10635 0.59 -0.3
2,138,310 + A4249_RS10635 0.59 +2.3
2,138,310 + A4249_RS10635 0.59 -0.3
2,138,310 + A4249_RS10635 0.59 -0.9
2,138,311 - A4249_RS10635 0.59 +1.7
2,138,311 - A4249_RS10635 0.59 -0.4
2,138,311 - A4249_RS10635 0.59 -0.4
2,138,311 - A4249_RS10635 0.59 +0.4
2,138,349 + A4249_RS10635 0.63 -0.3
2,138,349 + A4249_RS10635 0.63 -0.7
2,138,349 + A4249_RS10635 0.63 +0.2
2,138,349 + A4249_RS10635 0.63 -0.3
2,138,349 + A4249_RS10635 0.63 -1.2
2,138,349 + A4249_RS10635 0.63 +0.1
2,138,349 + A4249_RS10635 0.63 -2.3
2,138,349 + A4249_RS10635 0.63 -0.2
2,138,349 + A4249_RS10635 0.63 +0.4
2,138,349 + A4249_RS10635 0.63 -1.6
2,138,350 - A4249_RS10635 0.64 -0.0
2,138,350 - A4249_RS10635 0.64 +0.7
2,138,350 - A4249_RS10635 0.64 -0.7
2,138,350 - A4249_RS10635 0.64 -2.6
2,138,350 - A4249_RS10635 0.64 -0.0
2,138,350 - A4249_RS10635 0.64 +1.0
2,138,792 + A4249_RS10640 0.27 -0.1
2,138,792 + A4249_RS10640 0.27 -0.3
2,138,792 + A4249_RS10640 0.27 -0.4
2,138,792 + A4249_RS10640 0.27 +0.8
2,138,792 + A4249_RS10640 0.27 -0.5
2,138,793 - A4249_RS10640 0.27 -0.6
2,138,978 + A4249_RS10640 0.63 -0.6
2,138,979 - A4249_RS10640 0.64 +0.9
2,138,979 - A4249_RS10640 0.64 +0.2
2,139,038 + A4249_RS10640 0.75 -0.4
2,139,038 + A4249_RS10640 0.75 -0.1
2,139,038 + A4249_RS10640 0.75 +0.7
2,139,039 - A4249_RS10640 0.75 +0.7
2,139,039 - A4249_RS10640 0.75 +1.8
2,139,039 - A4249_RS10640 0.75 -0.0
2,139,051 - A4249_RS10640 0.78 -0.5
2,139,380 - A4249_RS10645 0.30 -0.0
2,139,380 - A4249_RS10645 0.30 -0.3
2,139,478 + A4249_RS10645 0.44 -0.7
2,139,478 + A4249_RS10645 0.44 -0.9
2,139,478 + A4249_RS10645 0.44 +0.0
2,139,478 + A4249_RS10645 0.44 -1.3
2,139,478 + A4249_RS10645 0.44 +1.0
2,139,478 + A4249_RS10645 0.44 +1.6
2,139,479 - A4249_RS10645 0.45 +0.8
2,139,479 - A4249_RS10645 0.45 +1.1
2,139,479 - A4249_RS10645 0.45 -0.3
2,139,479 - A4249_RS10645 0.45 +0.3
2,139,479 - A4249_RS10645 0.45 +0.2
2,139,479 - A4249_RS10645 0.45 +0.0
2,139,639 + A4249_RS10645 0.68 -0.2
2,139,639 + A4249_RS10645 0.68 -2.0
2,139,639 + A4249_RS10645 0.68 -1.6
2,139,639 + A4249_RS10645 0.68 -0.4
2,139,639 + A4249_RS10645 0.68 +1.4
2,139,639 + A4249_RS10645 0.68 -0.3
2,139,639 + A4249_RS10645 0.68 +0.4
2,139,639 + A4249_RS10645 0.68 -0.6
2,139,640 - A4249_RS10645 0.68 +0.2
2,139,640 - A4249_RS10645 0.68 -0.0
2,139,640 - A4249_RS10645 0.68 +0.1
2,139,640 - A4249_RS10645 0.68 -0.3
2,139,749 + A4249_RS10645 0.84 -3.2
2,139,749 + A4249_RS10645 0.84 -0.8
2,139,749 + A4249_RS10645 0.84 -1.4
2,139,749 + A4249_RS10645 0.84 +0.0
2,139,749 + A4249_RS10645 0.84 -1.0
2,139,749 + A4249_RS10645 0.84 -0.1
2,139,749 + A4249_RS10645 0.84 +0.2
2,139,749 + A4249_RS10645 0.84 -0.7
2,139,749 + A4249_RS10645 0.84 -1.4
2,139,749 + A4249_RS10645 0.84 -0.9
2,139,749 + A4249_RS10645 0.84 +0.1
2,139,749 + A4249_RS10645 0.84 +2.6
2,139,749 + A4249_RS10645 0.84 -1.6
2,139,749 + A4249_RS10645 0.84 -1.4
2,139,749 + A4249_RS10645 0.84 -0.2
2,139,750 - A4249_RS10645 0.85 -0.0
2,139,750 - A4249_RS10645 0.85 +0.6
2,139,750 - A4249_RS10645 0.85 +0.2
2,139,750 - A4249_RS10645 0.85 +0.0
2,139,750 - A4249_RS10645 0.85 -0.7
2,139,750 - A4249_RS10645 0.85 +2.2
2,139,750 - A4249_RS10645 0.85 +1.3
2,139,750 - A4249_RS10645 0.85 +0.0
2,139,897 + -0.7

Or see this region's nucleotide sequence