Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS09185 and A4249_RS09190 are separated by 3 nucleotides A4249_RS09190 and A4249_RS09195 are separated by 39 nucleotides A4249_RS09195 and A4249_RS09200 overlap by 4 nucleotides A4249_RS09200 and A4249_RS09205 are separated by 95 nucleotides
A4249_RS09185: A4249_RS09185 - M14 family metallopeptidase, at 1,838,929 to 1,840,698
_RS09185
A4249_RS09190: A4249_RS09190 - MAPEG family protein, at 1,840,702 to 1,841,109
_RS09190
A4249_RS09195: A4249_RS09195 - TldD/PmbA family protein, at 1,841,149 to 1,842,504
_RS09195
A4249_RS09200: A4249_RS09200 - 3'(2'),5'-bisphosphate nucleotidase CysQ, at 1,842,501 to 1,843,298
_RS09200
A4249_RS09205: A4249_RS09205 - DUF4170 domain-containing protein, at 1,843,394 to 1,843,639
_RS09205
Position (kb) 1841
1842
1843 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 1840.168 kb on + strand, within A4249_RS09185 at 1840.168 kb on + strand, within A4249_RS09185 at 1840.366 kb on + strand, within A4249_RS09185 at 1840.498 kb on + strand, within A4249_RS09185 at 1840.498 kb on + strand, within A4249_RS09185 at 1840.498 kb on + strand, within A4249_RS09185 at 1840.498 kb on + strand, within A4249_RS09185 at 1840.498 kb on + strand, within A4249_RS09185 at 1840.498 kb on + strand, within A4249_RS09185 at 1840.498 kb on + strand, within A4249_RS09185 at 1840.499 kb on - strand, within A4249_RS09185 at 1840.499 kb on - strand, within A4249_RS09185 at 1840.499 kb on - strand, within A4249_RS09185 at 1840.499 kb on - strand, within A4249_RS09185 at 1840.499 kb on - strand, within A4249_RS09185 at 1840.500 kb on + strand, within A4249_RS09185 at 1840.500 kb on + strand, within A4249_RS09185 at 1840.500 kb on + strand, within A4249_RS09185 at 1840.500 kb on + strand, within A4249_RS09185 at 1840.501 kb on - strand, within A4249_RS09185 at 1840.501 kb on - strand, within A4249_RS09185 at 1840.501 kb on - strand, within A4249_RS09185 at 1840.501 kb on - strand, within A4249_RS09185 at 1840.501 kb on - strand, within A4249_RS09185 at 1840.501 kb on - strand, within A4249_RS09185 at 1840.501 kb on - strand, within A4249_RS09185 at 1840.510 kb on + strand, within A4249_RS09185 at 1840.510 kb on + strand, within A4249_RS09185 at 1840.510 kb on + strand, within A4249_RS09185 at 1840.510 kb on + strand, within A4249_RS09185 at 1840.636 kb on + strand at 1840.636 kb on + strand at 1840.636 kb on + strand at 1840.636 kb on + strand at 1840.636 kb on + strand at 1840.636 kb on + strand at 1840.654 kb on + strand at 1840.654 kb on + strand at 1840.654 kb on + strand at 1840.654 kb on + strand at 1840.655 kb on - strand at 1840.655 kb on - strand at 1840.655 kb on - strand at 1840.655 kb on - strand at 1840.655 kb on - strand at 1840.655 kb on - strand at 1840.655 kb on - strand at 1840.666 kb on + strand at 1840.666 kb on + strand at 1840.666 kb on + strand at 1840.666 kb on + strand at 1840.666 kb on + strand at 1840.666 kb on + strand at 1840.667 kb on - strand at 1840.676 kb on - strand at 1840.720 kb on + strand at 1840.721 kb on - strand at 1840.721 kb on - strand at 1840.721 kb on - strand at 1840.721 kb on - strand at 1840.721 kb on - strand at 1840.721 kb on - strand at 1840.885 kb on + strand, within A4249_RS09190 at 1840.885 kb on + strand, within A4249_RS09190 at 1840.885 kb on + strand, within A4249_RS09190 at 1840.885 kb on + strand, within A4249_RS09190 at 1840.886 kb on - strand, within A4249_RS09190 at 1840.886 kb on - strand, within A4249_RS09190 at 1840.886 kb on - strand, within A4249_RS09190 at 1840.886 kb on - strand, within A4249_RS09190 at 1840.886 kb on - strand, within A4249_RS09190 at 1840.886 kb on - strand, within A4249_RS09190 at 1840.886 kb on - strand, within A4249_RS09190 at 1841.671 kb on + strand, within A4249_RS09195 at 1841.671 kb on + strand, within A4249_RS09195 at 1841.671 kb on + strand, within A4249_RS09195 at 1841.671 kb on + strand, within A4249_RS09195 at 1841.672 kb on - strand, within A4249_RS09195 at 1841.672 kb on - strand, within A4249_RS09195 at 1842.210 kb on + strand, within A4249_RS09195 at 1842.210 kb on + strand, within A4249_RS09195 at 1842.211 kb on - strand, within A4249_RS09195 at 1842.211 kb on - strand, within A4249_RS09195 at 1842.211 kb on - strand, within A4249_RS09195 at 1842.211 kb on - strand, within A4249_RS09195 at 1842.409 kb on + strand at 1842.409 kb on + strand at 1842.409 kb on + strand at 1842.410 kb on - strand at 1842.410 kb on - strand at 1842.410 kb on - strand at 1842.410 kb on - strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.413 kb on + strand at 1842.414 kb on - strand at 1842.414 kb on - strand at 1842.414 kb on - strand at 1842.414 kb on - strand at 1842.414 kb on - strand at 1842.414 kb on - strand at 1842.414 kb on - strand at 1842.687 kb on + strand, within A4249_RS09200 at 1842.716 kb on + strand, within A4249_RS09200 at 1842.716 kb on + strand, within A4249_RS09200 at 1842.716 kb on + strand, within A4249_RS09200 at 1842.717 kb on - strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.780 kb on + strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.781 kb on - strand, within A4249_RS09200 at 1842.782 kb on + strand, within A4249_RS09200 at 1842.782 kb on + strand, within A4249_RS09200 at 1842.782 kb on + strand, within A4249_RS09200 at 1842.782 kb on + strand, within A4249_RS09200 at 1842.782 kb on + strand, within A4249_RS09200 at 1842.782 kb on + strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.783 kb on - strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.853 kb on + strand, within A4249_RS09200 at 1842.854 kb on - strand, within A4249_RS09200 at 1842.854 kb on - strand, within A4249_RS09200 at 1842.854 kb on - strand, within A4249_RS09200 at 1842.854 kb on - strand, within A4249_RS09200 at 1842.854 kb on - strand, within A4249_RS09200 at 1842.879 kb on + strand, within A4249_RS09200 at 1842.879 kb on + strand, within A4249_RS09200 at 1842.879 kb on + strand, within A4249_RS09200 at 1842.879 kb on + strand, within A4249_RS09200 at 1842.879 kb on + strand, within A4249_RS09200 at 1842.879 kb on + strand, within A4249_RS09200 at 1842.880 kb on - strand, within A4249_RS09200 at 1842.880 kb on - strand, within A4249_RS09200 at 1842.880 kb on - strand, within A4249_RS09200 at 1842.880 kb on - strand, within A4249_RS09200 at 1842.880 kb on - strand, within A4249_RS09200 at 1842.880 kb on - strand, within A4249_RS09200 at 1842.911 kb on + strand, within A4249_RS09200 at 1842.912 kb on - strand, within A4249_RS09200 at 1842.912 kb on - strand, within A4249_RS09200 at 1842.944 kb on + strand, within A4249_RS09200 at 1842.997 kb on - strand, within A4249_RS09200 at 1842.997 kb on - strand, within A4249_RS09200 at 1843.274 kb on + strand at 1843.275 kb on - strand at 1843.296 kb on + strand at 1843.296 kb on + strand at 1843.351 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 1,840,168 + A4249_RS09185 0.70 -0.8 1,840,168 + A4249_RS09185 0.70 -0.5 1,840,366 + A4249_RS09185 0.81 +0.1 1,840,498 + A4249_RS09185 0.89 +0.4 1,840,498 + A4249_RS09185 0.89 +0.3 1,840,498 + A4249_RS09185 0.89 +1.0 1,840,498 + A4249_RS09185 0.89 -2.2 1,840,498 + A4249_RS09185 0.89 -0.5 1,840,498 + A4249_RS09185 0.89 -0.4 1,840,498 + A4249_RS09185 0.89 -0.6 1,840,499 - A4249_RS09185 0.89 -0.3 1,840,499 - A4249_RS09185 0.89 -2.5 1,840,499 - A4249_RS09185 0.89 +0.2 1,840,499 - A4249_RS09185 0.89 +1.3 1,840,499 - A4249_RS09185 0.89 -0.3 1,840,500 + A4249_RS09185 0.89 +0.1 1,840,500 + A4249_RS09185 0.89 +0.6 1,840,500 + A4249_RS09185 0.89 -1.0 1,840,500 + A4249_RS09185 0.89 -0.4 1,840,501 - A4249_RS09185 0.89 +0.3 1,840,501 - A4249_RS09185 0.89 -2.4 1,840,501 - A4249_RS09185 0.89 +1.4 1,840,501 - A4249_RS09185 0.89 +0.0 1,840,501 - A4249_RS09185 0.89 -1.5 1,840,501 - A4249_RS09185 0.89 -0.2 1,840,501 - A4249_RS09185 0.89 -0.3 1,840,510 + A4249_RS09185 0.89 +0.6 1,840,510 + A4249_RS09185 0.89 +0.7 1,840,510 + A4249_RS09185 0.89 +1.3 1,840,510 + A4249_RS09185 0.89 -2.0 1,840,636 + +0.5 1,840,636 + +0.2 1,840,636 + +0.3 1,840,636 + -0.3 1,840,636 + +0.7 1,840,636 + +2.0 1,840,654 + +1.3 1,840,654 + -0.0 1,840,654 + -1.0 1,840,654 + -0.0 1,840,655 - +0.7 1,840,655 - +0.2 1,840,655 - +0.5 1,840,655 - -2.2 1,840,655 - +0.1 1,840,655 - +0.4 1,840,655 - +0.6 1,840,666 + -0.5 1,840,666 + +0.4 1,840,666 + -0.4 1,840,666 + -0.5 1,840,666 + +0.5 1,840,666 + -0.8 1,840,667 - -1.4 1,840,676 - +0.1 1,840,720 + -0.3 1,840,721 - -0.6 1,840,721 - -0.1 1,840,721 - +1.0 1,840,721 - +0.3 1,840,721 - +0.0 1,840,721 - +1.7 1,840,885 + A4249_RS09190 0.45 -0.9 1,840,885 + A4249_RS09190 0.45 -0.2 1,840,885 + A4249_RS09190 0.45 -0.0 1,840,885 + A4249_RS09190 0.45 +0.8 1,840,886 - A4249_RS09190 0.45 +1.0 1,840,886 - A4249_RS09190 0.45 -0.0 1,840,886 - A4249_RS09190 0.45 -0.8 1,840,886 - A4249_RS09190 0.45 +0.7 1,840,886 - A4249_RS09190 0.45 +0.1 1,840,886 - A4249_RS09190 0.45 -0.3 1,840,886 - A4249_RS09190 0.45 -0.2 1,841,671 + A4249_RS09195 0.38 -1.2 1,841,671 + A4249_RS09195 0.38 -2.0 1,841,671 + A4249_RS09195 0.38 +3.1 1,841,671 + A4249_RS09195 0.38 -0.3 1,841,672 - A4249_RS09195 0.39 -2.6 1,841,672 - A4249_RS09195 0.39 -1.4 1,842,210 + A4249_RS09195 0.78 +0.4 1,842,210 + A4249_RS09195 0.78 +0.5 1,842,211 - A4249_RS09195 0.78 -1.2 1,842,211 - A4249_RS09195 0.78 +0.7 1,842,211 - A4249_RS09195 0.78 -0.0 1,842,211 - A4249_RS09195 0.78 +0.8 1,842,409 + +1.1 1,842,409 + +0.4 1,842,409 + +0.3 1,842,410 - +1.0 1,842,410 - -0.0 1,842,410 - -0.2 1,842,410 - +1.4 1,842,413 + +0.5 1,842,413 + -0.0 1,842,413 + +0.1 1,842,413 + +0.0 1,842,413 + +0.2 1,842,413 + -0.4 1,842,413 + +1.2 1,842,413 + +1.0 1,842,413 + +0.3 1,842,413 + -0.7 1,842,413 + -0.0 1,842,413 + -1.0 1,842,413 + +1.0 1,842,413 + +0.8 1,842,413 + -0.3 1,842,414 - +0.1 1,842,414 - +0.6 1,842,414 - -0.0 1,842,414 - -0.9 1,842,414 - +2.0 1,842,414 - +0.5 1,842,414 - +0.4 1,842,687 + A4249_RS09200 0.23 -0.1 1,842,716 + A4249_RS09200 0.27 +1.3 1,842,716 + A4249_RS09200 0.27 +2.0 1,842,716 + A4249_RS09200 0.27 -1.5 1,842,717 - A4249_RS09200 0.27 -0.5 1,842,780 + A4249_RS09200 0.35 +0.8 1,842,780 + A4249_RS09200 0.35 -1.7 1,842,780 + A4249_RS09200 0.35 -0.6 1,842,780 + A4249_RS09200 0.35 +1.8 1,842,780 + A4249_RS09200 0.35 -0.5 1,842,780 + A4249_RS09200 0.35 +1.0 1,842,780 + A4249_RS09200 0.35 -2.4 1,842,780 + A4249_RS09200 0.35 +0.5 1,842,780 + A4249_RS09200 0.35 -0.8 1,842,780 + A4249_RS09200 0.35 +0.5 1,842,780 + A4249_RS09200 0.35 -0.0 1,842,781 - A4249_RS09200 0.35 -0.4 1,842,781 - A4249_RS09200 0.35 +0.5 1,842,781 - A4249_RS09200 0.35 +0.4 1,842,781 - A4249_RS09200 0.35 -0.2 1,842,781 - A4249_RS09200 0.35 +0.1 1,842,781 - A4249_RS09200 0.35 +1.4 1,842,781 - A4249_RS09200 0.35 +2.0 1,842,781 - A4249_RS09200 0.35 -2.4 1,842,782 + A4249_RS09200 0.35 -0.6 1,842,782 + A4249_RS09200 0.35 -0.0 1,842,782 + A4249_RS09200 0.35 +0.5 1,842,782 + A4249_RS09200 0.35 -0.2 1,842,782 + A4249_RS09200 0.35 +0.8 1,842,782 + A4249_RS09200 0.35 +0.1 1,842,783 - A4249_RS09200 0.35 -0.0 1,842,783 - A4249_RS09200 0.35 +1.5 1,842,783 - A4249_RS09200 0.35 +0.1 1,842,783 - A4249_RS09200 0.35 +0.3 1,842,783 - A4249_RS09200 0.35 -0.6 1,842,783 - A4249_RS09200 0.35 -1.0 1,842,783 - A4249_RS09200 0.35 -2.0 1,842,783 - A4249_RS09200 0.35 +2.3 1,842,783 - A4249_RS09200 0.35 -0.5 1,842,783 - A4249_RS09200 0.35 -2.6 1,842,853 + A4249_RS09200 0.44 -0.9 1,842,853 + A4249_RS09200 0.44 +1.7 1,842,853 + A4249_RS09200 0.44 -1.4 1,842,853 + A4249_RS09200 0.44 +1.1 1,842,853 + A4249_RS09200 0.44 -0.3 1,842,853 + A4249_RS09200 0.44 -0.3 1,842,853 + A4249_RS09200 0.44 -0.0 1,842,853 + A4249_RS09200 0.44 +0.2 1,842,853 + A4249_RS09200 0.44 -0.8 1,842,853 + A4249_RS09200 0.44 +2.3 1,842,853 + A4249_RS09200 0.44 +0.0 1,842,854 - A4249_RS09200 0.44 +0.4 1,842,854 - A4249_RS09200 0.44 +0.2 1,842,854 - A4249_RS09200 0.44 +1.5 1,842,854 - A4249_RS09200 0.44 -0.0 1,842,854 - A4249_RS09200 0.44 +2.4 1,842,879 + A4249_RS09200 0.47 -0.0 1,842,879 + A4249_RS09200 0.47 -0.8 1,842,879 + A4249_RS09200 0.47 -1.3 1,842,879 + A4249_RS09200 0.47 -1.0 1,842,879 + A4249_RS09200 0.47 -0.8 1,842,879 + A4249_RS09200 0.47 +1.4 1,842,880 - A4249_RS09200 0.47 +0.5 1,842,880 - A4249_RS09200 0.47 -0.1 1,842,880 - A4249_RS09200 0.47 +1.2 1,842,880 - A4249_RS09200 0.47 -1.2 1,842,880 - A4249_RS09200 0.47 +0.2 1,842,880 - A4249_RS09200 0.47 -0.0 1,842,911 + A4249_RS09200 0.51 +1.1 1,842,912 - A4249_RS09200 0.52 -0.7 1,842,912 - A4249_RS09200 0.52 -2.0 1,842,944 + A4249_RS09200 0.56 -1.0 1,842,997 - A4249_RS09200 0.62 -0.0 1,842,997 - A4249_RS09200 0.62 +0.2 1,843,274 + +1.5 1,843,275 - -0.6 1,843,296 + +1.0 1,843,296 + +1.1 1,843,351 - -2.4
Or see this region's nucleotide sequence