Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08485

Experiment: Tween 20 (C), 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08480 and A4249_RS08485 overlap by 4 nucleotidesA4249_RS08485 and A4249_RS08490 overlap by 4 nucleotides A4249_RS08480: A4249_RS08480 - monovalent cation/H+ antiporter subunit A, at 1,701,068 to 1,703,986 _RS08480 A4249_RS08485: A4249_RS08485 - Na+/H+ antiporter subunit C, at 1,703,983 to 1,704,327 _RS08485 A4249_RS08490: A4249_RS08490 - monovalent cation/H+ antiporter subunit D, at 1,704,324 to 1,705,919 _RS08490 Position (kb) 1703 1704 1705Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1702.992 kb on + strand, within A4249_RS08480at 1702.993 kb on - strand, within A4249_RS08480at 1703.237 kb on + strand, within A4249_RS08480at 1703.238 kb on - strand, within A4249_RS08480at 1703.238 kb on - strand, within A4249_RS08480at 1703.297 kb on + strand, within A4249_RS08480at 1703.297 kb on + strand, within A4249_RS08480at 1703.298 kb on - strand, within A4249_RS08480at 1703.298 kb on - strand, within A4249_RS08480at 1703.298 kb on - strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.672 kb on + strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.673 kb on - strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.674 kb on + strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.675 kb on - strand, within A4249_RS08480at 1703.816 kb on + strandat 1703.816 kb on + strandat 1703.816 kb on + strandat 1703.816 kb on + strandat 1703.816 kb on + strandat 1703.817 kb on - strandat 1703.950 kb on + strandat 1703.951 kb on - strandat 1703.951 kb on - strandat 1703.951 kb on - strandat 1703.951 kb on - strandat 1703.951 kb on - strandat 1704.094 kb on + strand, within A4249_RS08485at 1704.094 kb on + strand, within A4249_RS08485at 1704.094 kb on + strand, within A4249_RS08485at 1704.095 kb on - strand, within A4249_RS08485at 1704.095 kb on - strand, within A4249_RS08485at 1704.095 kb on - strand, within A4249_RS08485at 1704.184 kb on + strand, within A4249_RS08485at 1704.185 kb on - strand, within A4249_RS08485at 1704.434 kb on + strandat 1704.434 kb on + strandat 1704.435 kb on - strandat 1704.435 kb on - strandat 1704.435 kb on - strandat 1704.519 kb on - strand, within A4249_RS08490at 1704.780 kb on + strand, within A4249_RS08490at 1704.781 kb on - strand, within A4249_RS08490at 1704.781 kb on - strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.834 kb on + strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.835 kb on - strand, within A4249_RS08490at 1704.837 kb on - strand, within A4249_RS08490at 1704.891 kb on + strand, within A4249_RS08490at 1704.892 kb on - strand, within A4249_RS08490at 1704.952 kb on + strand, within A4249_RS08490at 1704.953 kb on - strand, within A4249_RS08490at 1704.961 kb on + strand, within A4249_RS08490at 1704.961 kb on + strand, within A4249_RS08490at 1704.961 kb on + strand, within A4249_RS08490at 1704.961 kb on + strand, within A4249_RS08490at 1704.961 kb on + strand, within A4249_RS08490at 1704.961 kb on + strand, within A4249_RS08490at 1704.962 kb on - strand, within A4249_RS08490at 1704.962 kb on - strand, within A4249_RS08490at 1704.962 kb on - strand, within A4249_RS08490at 1704.962 kb on - strand, within A4249_RS08490at 1705.053 kb on + strand, within A4249_RS08490at 1705.053 kb on + strand, within A4249_RS08490at 1705.053 kb on + strand, within A4249_RS08490at 1705.054 kb on - strand, within A4249_RS08490at 1705.113 kb on + strand, within A4249_RS08490at 1705.113 kb on + strand, within A4249_RS08490at 1705.113 kb on + strand, within A4249_RS08490at 1705.113 kb on + strand, within A4249_RS08490at 1705.113 kb on + strand, within A4249_RS08490at 1705.113 kb on + strand, within A4249_RS08490at 1705.113 kb on + strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.114 kb on - strand, within A4249_RS08490at 1705.213 kb on + strand, within A4249_RS08490at 1705.213 kb on + strand, within A4249_RS08490at 1705.213 kb on + strand, within A4249_RS08490at 1705.214 kb on - strand, within A4249_RS08490

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 20C
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1,702,992 + A4249_RS08480 0.66 +1.2
1,702,993 - A4249_RS08480 0.66 -0.3
1,703,237 + A4249_RS08480 0.74 +0.5
1,703,238 - A4249_RS08480 0.74 +0.4
1,703,238 - A4249_RS08480 0.74 -1.6
1,703,297 + A4249_RS08480 0.76 -0.5
1,703,297 + A4249_RS08480 0.76 +1.0
1,703,298 - A4249_RS08480 0.76 +0.0
1,703,298 - A4249_RS08480 0.76 +0.7
1,703,298 - A4249_RS08480 0.76 -1.3
1,703,672 + A4249_RS08480 0.89 -0.2
1,703,672 + A4249_RS08480 0.89 +0.2
1,703,672 + A4249_RS08480 0.89 +0.8
1,703,672 + A4249_RS08480 0.89 +0.4
1,703,672 + A4249_RS08480 0.89 +0.1
1,703,672 + A4249_RS08480 0.89 -0.4
1,703,672 + A4249_RS08480 0.89 +1.1
1,703,672 + A4249_RS08480 0.89 -0.4
1,703,672 + A4249_RS08480 0.89 -0.3
1,703,672 + A4249_RS08480 0.89 +0.4
1,703,672 + A4249_RS08480 0.89 +0.3
1,703,672 + A4249_RS08480 0.89 -0.0
1,703,672 + A4249_RS08480 0.89 -0.0
1,703,672 + A4249_RS08480 0.89 -0.1
1,703,672 + A4249_RS08480 0.89 -2.2
1,703,672 + A4249_RS08480 0.89 -0.9
1,703,672 + A4249_RS08480 0.89 -1.0
1,703,672 + A4249_RS08480 0.89 +1.2
1,703,673 - A4249_RS08480 0.89 +0.4
1,703,673 - A4249_RS08480 0.89 +0.5
1,703,673 - A4249_RS08480 0.89 +0.5
1,703,673 - A4249_RS08480 0.89 -0.5
1,703,673 - A4249_RS08480 0.89 -1.0
1,703,673 - A4249_RS08480 0.89 -0.4
1,703,673 - A4249_RS08480 0.89 -0.3
1,703,673 - A4249_RS08480 0.89 -0.4
1,703,673 - A4249_RS08480 0.89 +0.3
1,703,673 - A4249_RS08480 0.89 +1.2
1,703,673 - A4249_RS08480 0.89 -0.0
1,703,673 - A4249_RS08480 0.89 +0.6
1,703,673 - A4249_RS08480 0.89 +0.8
1,703,673 - A4249_RS08480 0.89 -1.3
1,703,673 - A4249_RS08480 0.89 -0.3
1,703,673 - A4249_RS08480 0.89 -0.7
1,703,673 - A4249_RS08480 0.89 +0.8
1,703,673 - A4249_RS08480 0.89 -1.8
1,703,673 - A4249_RS08480 0.89 -2.0
1,703,673 - A4249_RS08480 0.89 +3.0
1,703,673 - A4249_RS08480 0.89 +0.3
1,703,673 - A4249_RS08480 0.89 +0.4
1,703,674 + A4249_RS08480 0.89 +0.1
1,703,674 + A4249_RS08480 0.89 -1.0
1,703,674 + A4249_RS08480 0.89 -0.1
1,703,674 + A4249_RS08480 0.89 +1.0
1,703,674 + A4249_RS08480 0.89 -0.8
1,703,674 + A4249_RS08480 0.89 -0.9
1,703,674 + A4249_RS08480 0.89 +1.3
1,703,674 + A4249_RS08480 0.89 +0.7
1,703,674 + A4249_RS08480 0.89 +2.3
1,703,674 + A4249_RS08480 0.89 +0.5
1,703,674 + A4249_RS08480 0.89 +1.5
1,703,674 + A4249_RS08480 0.89 +0.4
1,703,674 + A4249_RS08480 0.89 -0.7
1,703,674 + A4249_RS08480 0.89 -0.5
1,703,674 + A4249_RS08480 0.89 +0.3
1,703,675 - A4249_RS08480 0.89 -0.4
1,703,675 - A4249_RS08480 0.89 +2.1
1,703,675 - A4249_RS08480 0.89 +0.0
1,703,675 - A4249_RS08480 0.89 +1.0
1,703,675 - A4249_RS08480 0.89 +0.4
1,703,675 - A4249_RS08480 0.89 +0.4
1,703,675 - A4249_RS08480 0.89 +0.3
1,703,675 - A4249_RS08480 0.89 +0.8
1,703,675 - A4249_RS08480 0.89 -0.8
1,703,675 - A4249_RS08480 0.89 -0.5
1,703,675 - A4249_RS08480 0.89 -2.0
1,703,675 - A4249_RS08480 0.89 -0.5
1,703,675 - A4249_RS08480 0.89 +0.2
1,703,675 - A4249_RS08480 0.89 -0.6
1,703,675 - A4249_RS08480 0.89 +0.7
1,703,675 - A4249_RS08480 0.89 -0.3
1,703,675 - A4249_RS08480 0.89 +0.5
1,703,675 - A4249_RS08480 0.89 -1.4
1,703,675 - A4249_RS08480 0.89 -0.3
1,703,816 + +0.1
1,703,816 + -0.5
1,703,816 + +0.8
1,703,816 + +0.3
1,703,816 + +0.5
1,703,817 - -1.4
1,703,950 + -0.8
1,703,951 - -0.5
1,703,951 - -0.3
1,703,951 - -1.0
1,703,951 - +2.3
1,703,951 - -0.8
1,704,094 + A4249_RS08485 0.32 -1.0
1,704,094 + A4249_RS08485 0.32 -0.5
1,704,094 + A4249_RS08485 0.32 -0.4
1,704,095 - A4249_RS08485 0.32 -0.4
1,704,095 - A4249_RS08485 0.32 +0.1
1,704,095 - A4249_RS08485 0.32 -0.7
1,704,184 + A4249_RS08485 0.58 -0.8
1,704,185 - A4249_RS08485 0.59 -1.0
1,704,434 + +0.2
1,704,434 + -1.8
1,704,435 - +0.7
1,704,435 - +1.0
1,704,435 - +0.2
1,704,519 - A4249_RS08490 0.12 +0.8
1,704,780 + A4249_RS08490 0.29 -0.7
1,704,781 - A4249_RS08490 0.29 -0.5
1,704,781 - A4249_RS08490 0.29 +1.5
1,704,834 + A4249_RS08490 0.32 -0.3
1,704,834 + A4249_RS08490 0.32 -0.0
1,704,834 + A4249_RS08490 0.32 +0.6
1,704,834 + A4249_RS08490 0.32 -1.3
1,704,834 + A4249_RS08490 0.32 +1.2
1,704,834 + A4249_RS08490 0.32 +0.4
1,704,834 + A4249_RS08490 0.32 -0.8
1,704,834 + A4249_RS08490 0.32 -0.6
1,704,834 + A4249_RS08490 0.32 +1.5
1,704,834 + A4249_RS08490 0.32 +0.4
1,704,834 + A4249_RS08490 0.32 -1.5
1,704,834 + A4249_RS08490 0.32 +1.1
1,704,834 + A4249_RS08490 0.32 +0.2
1,704,834 + A4249_RS08490 0.32 +0.2
1,704,835 - A4249_RS08490 0.32 -0.2
1,704,835 - A4249_RS08490 0.32 -0.6
1,704,835 - A4249_RS08490 0.32 -1.0
1,704,835 - A4249_RS08490 0.32 -0.0
1,704,835 - A4249_RS08490 0.32 +1.1
1,704,835 - A4249_RS08490 0.32 -0.6
1,704,835 - A4249_RS08490 0.32 -0.4
1,704,835 - A4249_RS08490 0.32 +0.4
1,704,835 - A4249_RS08490 0.32 -0.2
1,704,835 - A4249_RS08490 0.32 -1.4
1,704,835 - A4249_RS08490 0.32 -1.5
1,704,835 - A4249_RS08490 0.32 -1.3
1,704,835 - A4249_RS08490 0.32 +0.7
1,704,835 - A4249_RS08490 0.32 -0.6
1,704,835 - A4249_RS08490 0.32 +0.5
1,704,835 - A4249_RS08490 0.32 +0.4
1,704,835 - A4249_RS08490 0.32 -0.4
1,704,835 - A4249_RS08490 0.32 +0.1
1,704,835 - A4249_RS08490 0.32 +0.3
1,704,835 - A4249_RS08490 0.32 +1.0
1,704,835 - A4249_RS08490 0.32 +0.1
1,704,837 - A4249_RS08490 0.32 -2.4
1,704,891 + A4249_RS08490 0.36 +0.8
1,704,892 - A4249_RS08490 0.36 +2.8
1,704,952 + A4249_RS08490 0.39 -0.8
1,704,953 - A4249_RS08490 0.39 -0.0
1,704,961 + A4249_RS08490 0.40 -0.3
1,704,961 + A4249_RS08490 0.40 -0.0
1,704,961 + A4249_RS08490 0.40 -0.4
1,704,961 + A4249_RS08490 0.40 -0.0
1,704,961 + A4249_RS08490 0.40 -1.5
1,704,961 + A4249_RS08490 0.40 +0.1
1,704,962 - A4249_RS08490 0.40 -0.0
1,704,962 - A4249_RS08490 0.40 +0.5
1,704,962 - A4249_RS08490 0.40 +1.0
1,704,962 - A4249_RS08490 0.40 +0.7
1,705,053 + A4249_RS08490 0.46 -0.0
1,705,053 + A4249_RS08490 0.46 -0.1
1,705,053 + A4249_RS08490 0.46 -0.4
1,705,054 - A4249_RS08490 0.46 -2.0
1,705,113 + A4249_RS08490 0.49 +0.5
1,705,113 + A4249_RS08490 0.49 -0.1
1,705,113 + A4249_RS08490 0.49 +0.6
1,705,113 + A4249_RS08490 0.49 -1.6
1,705,113 + A4249_RS08490 0.49 +0.2
1,705,113 + A4249_RS08490 0.49 +1.3
1,705,113 + A4249_RS08490 0.49 -0.3
1,705,114 - A4249_RS08490 0.49 -0.6
1,705,114 - A4249_RS08490 0.49 +0.7
1,705,114 - A4249_RS08490 0.49 +1.0
1,705,114 - A4249_RS08490 0.49 +1.8
1,705,114 - A4249_RS08490 0.49 +0.1
1,705,114 - A4249_RS08490 0.49 +1.4
1,705,114 - A4249_RS08490 0.49 -0.0
1,705,114 - A4249_RS08490 0.49 -0.0
1,705,114 - A4249_RS08490 0.49 +0.1
1,705,114 - A4249_RS08490 0.49 +1.0
1,705,114 - A4249_RS08490 0.49 -0.5
1,705,114 - A4249_RS08490 0.49 -1.0
1,705,114 - A4249_RS08490 0.49 -0.8
1,705,114 - A4249_RS08490 0.49 -0.7
1,705,213 + A4249_RS08490 0.56 -0.6
1,705,213 + A4249_RS08490 0.56 -0.0
1,705,213 + A4249_RS08490 0.56 +0.4
1,705,214 - A4249_RS08490 0.56 +0.6

Or see this region's nucleotide sequence