Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS03655 and A4249_RS03660 are separated by 91 nucleotides A4249_RS03660 and A4249_RS03665 are separated by 62 nucleotides A4249_RS03665 and A4249_RS03670 overlap by 8 nucleotides
A4249_RS03655: A4249_RS03655 - winged helix-turn-helix domain-containing protein, at 773,652 to 774,587
_RS03655
A4249_RS03660: A4249_RS03660 - PAS domain-containing sensor histidine kinase, at 774,679 to 775,686
_RS03660
A4249_RS03665: A4249_RS03665 - ArsC family reductase, at 775,749 to 776,096
_RS03665
A4249_RS03670: A4249_RS03670 - endonuclease/exonuclease/phosphatase family protein, at 776,089 to 776,898
_RS03670
Position (kb) 774
775
776 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 773.693 kb on + strand at 773.693 kb on + strand at 773.753 kb on - strand, within A4249_RS03655 at 773.872 kb on + strand, within A4249_RS03655 at 773.872 kb on + strand, within A4249_RS03655 at 773.872 kb on + strand, within A4249_RS03655 at 773.872 kb on + strand, within A4249_RS03655 at 773.872 kb on + strand, within A4249_RS03655 at 773.872 kb on + strand, within A4249_RS03655 at 773.873 kb on - strand, within A4249_RS03655 at 773.873 kb on - strand, within A4249_RS03655 at 773.873 kb on - strand, within A4249_RS03655 at 773.924 kb on + strand, within A4249_RS03655 at 773.924 kb on + strand, within A4249_RS03655 at 773.924 kb on + strand, within A4249_RS03655 at 773.925 kb on - strand, within A4249_RS03655 at 773.925 kb on - strand, within A4249_RS03655 at 774.228 kb on + strand, within A4249_RS03655 at 774.228 kb on + strand, within A4249_RS03655 at 774.228 kb on + strand, within A4249_RS03655 at 774.228 kb on + strand, within A4249_RS03655 at 774.228 kb on + strand, within A4249_RS03655 at 774.229 kb on - strand, within A4249_RS03655 at 774.229 kb on - strand, within A4249_RS03655 at 774.229 kb on - strand, within A4249_RS03655 at 774.229 kb on - strand, within A4249_RS03655 at 774.229 kb on - strand, within A4249_RS03655 at 774.229 kb on - strand, within A4249_RS03655 at 774.229 kb on - strand, within A4249_RS03655 at 774.534 kb on + strand at 774.534 kb on + strand at 774.534 kb on + strand at 774.534 kb on + strand at 774.535 kb on - strand at 774.535 kb on - strand at 774.535 kb on - strand at 774.535 kb on - strand at 774.547 kb on + strand at 774.689 kb on + strand at 774.690 kb on + strand at 774.691 kb on - strand at 774.691 kb on - strand at 774.759 kb on + strand at 774.759 kb on + strand at 774.759 kb on + strand at 774.759 kb on + strand at 774.759 kb on + strand at 774.759 kb on + strand at 774.759 kb on + strand at 774.760 kb on - strand at 774.760 kb on - strand at 774.760 kb on - strand at 774.760 kb on - strand at 774.760 kb on - strand at 774.760 kb on - strand at 774.763 kb on + strand at 774.763 kb on + strand at 774.764 kb on - strand at 774.764 kb on - strand at 774.764 kb on - strand at 774.829 kb on + strand, within A4249_RS03660 at 774.829 kb on + strand, within A4249_RS03660 at 774.830 kb on - strand, within A4249_RS03660 at 774.830 kb on - strand, within A4249_RS03660 at 774.830 kb on - strand, within A4249_RS03660 at 774.841 kb on + strand, within A4249_RS03660 at 774.841 kb on + strand, within A4249_RS03660 at 774.841 kb on + strand, within A4249_RS03660 at 774.842 kb on - strand, within A4249_RS03660 at 774.842 kb on - strand, within A4249_RS03660 at 774.842 kb on - strand, within A4249_RS03660 at 774.842 kb on - strand, within A4249_RS03660 at 774.842 kb on - strand, within A4249_RS03660 at 774.843 kb on + strand, within A4249_RS03660 at 774.843 kb on + strand, within A4249_RS03660 at 774.843 kb on + strand, within A4249_RS03660 at 774.843 kb on + strand, within A4249_RS03660 at 774.844 kb on - strand, within A4249_RS03660 at 774.844 kb on - strand, within A4249_RS03660 at 774.844 kb on - strand, within A4249_RS03660 at 774.844 kb on - strand, within A4249_RS03660 at 775.033 kb on + strand, within A4249_RS03660 at 775.033 kb on + strand, within A4249_RS03660 at 775.033 kb on + strand, within A4249_RS03660 at 775.034 kb on - strand, within A4249_RS03660 at 775.034 kb on - strand, within A4249_RS03660 at 775.034 kb on - strand, within A4249_RS03660 at 775.077 kb on + strand, within A4249_RS03660 at 775.332 kb on + strand, within A4249_RS03660 at 775.333 kb on - strand, within A4249_RS03660 at 775.333 kb on - strand, within A4249_RS03660 at 775.631 kb on + strand at 775.631 kb on + strand at 775.632 kb on - strand at 775.632 kb on - strand at 775.632 kb on - strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.755 kb on + strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.756 kb on - strand at 775.764 kb on + strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.765 kb on - strand at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.830 kb on + strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.831 kb on - strand, within A4249_RS03665 at 775.845 kb on + strand, within A4249_RS03665 at 775.845 kb on + strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 775.846 kb on - strand, within A4249_RS03665 at 776.076 kb on + strand at 776.077 kb on - strand at 776.090 kb on + strand at 776.090 kb on + strand at 776.091 kb on - strand at 776.091 kb on - strand at 776.091 kb on - strand at 776.135 kb on + strand at 776.386 kb on + strand, within A4249_RS03670 at 776.387 kb on - strand, within A4249_RS03670
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 773,693 + +0.1 773,693 + -0.1 773,753 - A4249_RS03655 0.11 -0.5 773,872 + A4249_RS03655 0.24 +0.4 773,872 + A4249_RS03655 0.24 -0.7 773,872 + A4249_RS03655 0.24 +1.7 773,872 + A4249_RS03655 0.24 +2.5 773,872 + A4249_RS03655 0.24 +1.9 773,872 + A4249_RS03655 0.24 +0.3 773,873 - A4249_RS03655 0.24 -2.2 773,873 - A4249_RS03655 0.24 +0.9 773,873 - A4249_RS03655 0.24 +0.4 773,924 + A4249_RS03655 0.29 +1.2 773,924 + A4249_RS03655 0.29 -2.6 773,924 + A4249_RS03655 0.29 -0.2 773,925 - A4249_RS03655 0.29 -1.2 773,925 - A4249_RS03655 0.29 +1.4 774,228 + A4249_RS03655 0.62 -0.1 774,228 + A4249_RS03655 0.62 -0.1 774,228 + A4249_RS03655 0.62 +0.3 774,228 + A4249_RS03655 0.62 -0.7 774,228 + A4249_RS03655 0.62 +1.6 774,229 - A4249_RS03655 0.62 -0.3 774,229 - A4249_RS03655 0.62 +0.0 774,229 - A4249_RS03655 0.62 -1.4 774,229 - A4249_RS03655 0.62 -0.3 774,229 - A4249_RS03655 0.62 -0.2 774,229 - A4249_RS03655 0.62 -0.3 774,229 - A4249_RS03655 0.62 -0.1 774,534 + +0.3 774,534 + -1.1 774,534 + +0.8 774,534 + +0.9 774,535 - +0.1 774,535 - +0.4 774,535 - -0.0 774,535 - +1.5 774,547 + -0.1 774,689 + +0.6 774,690 + -0.1 774,691 - -0.3 774,691 - -1.1 774,759 + +0.3 774,759 + +0.4 774,759 + -1.1 774,759 + -1.1 774,759 + +0.6 774,759 + +0.1 774,759 + -1.7 774,760 - +0.9 774,760 - -0.4 774,760 - +1.2 774,760 - +1.1 774,760 - -2.0 774,760 - -0.6 774,763 + +0.1 774,763 + +1.3 774,764 - +0.0 774,764 - -1.4 774,764 - +0.0 774,829 + A4249_RS03660 0.15 -1.1 774,829 + A4249_RS03660 0.15 -0.1 774,830 - A4249_RS03660 0.15 -0.4 774,830 - A4249_RS03660 0.15 +0.5 774,830 - A4249_RS03660 0.15 +1.6 774,841 + A4249_RS03660 0.16 +0.4 774,841 + A4249_RS03660 0.16 -1.7 774,841 + A4249_RS03660 0.16 -1.4 774,842 - A4249_RS03660 0.16 -0.1 774,842 - A4249_RS03660 0.16 -1.1 774,842 - A4249_RS03660 0.16 -1.1 774,842 - A4249_RS03660 0.16 -0.4 774,842 - A4249_RS03660 0.16 -0.6 774,843 + A4249_RS03660 0.16 -0.0 774,843 + A4249_RS03660 0.16 +0.4 774,843 + A4249_RS03660 0.16 +0.3 774,843 + A4249_RS03660 0.16 -0.1 774,844 - A4249_RS03660 0.16 +0.1 774,844 - A4249_RS03660 0.16 -1.0 774,844 - A4249_RS03660 0.16 +0.2 774,844 - A4249_RS03660 0.16 +0.1 775,033 + A4249_RS03660 0.35 -0.1 775,033 + A4249_RS03660 0.35 +0.0 775,033 + A4249_RS03660 0.35 -0.8 775,034 - A4249_RS03660 0.35 +1.6 775,034 - A4249_RS03660 0.35 -0.1 775,034 - A4249_RS03660 0.35 +2.2 775,077 + A4249_RS03660 0.39 +0.6 775,332 + A4249_RS03660 0.65 +0.1 775,333 - A4249_RS03660 0.65 +0.1 775,333 - A4249_RS03660 0.65 +0.5 775,631 + -0.7 775,631 + +0.5 775,632 - +1.6 775,632 - -0.7 775,632 - +0.1 775,755 + -2.1 775,755 + +2.1 775,755 + -0.1 775,755 + -1.2 775,755 + -0.9 775,755 + +0.5 775,755 + -0.6 775,755 + +1.2 775,755 + +0.6 775,755 + +1.2 775,755 + -0.8 775,755 + -0.9 775,755 + +0.1 775,755 + -0.2 775,755 + -1.6 775,755 + -1.2 775,756 - -0.1 775,756 - -0.8 775,756 - -1.1 775,756 - -0.8 775,756 - -0.3 775,756 - +1.7 775,756 - +0.0 775,756 - -0.1 775,756 - -0.9 775,756 - -2.8 775,756 - -0.1 775,756 - -0.6 775,764 + -0.0 775,765 - -1.4 775,765 - -0.5 775,765 - -1.1 775,765 - -0.0 775,765 - +1.3 775,830 + A4249_RS03665 0.23 +2.7 775,830 + A4249_RS03665 0.23 +3.1 775,830 + A4249_RS03665 0.23 -1.1 775,830 + A4249_RS03665 0.23 -0.3 775,830 + A4249_RS03665 0.23 -0.8 775,830 + A4249_RS03665 0.23 +1.1 775,830 + A4249_RS03665 0.23 +0.8 775,830 + A4249_RS03665 0.23 -0.1 775,830 + A4249_RS03665 0.23 -0.2 775,831 - A4249_RS03665 0.24 +0.1 775,831 - A4249_RS03665 0.24 +2.2 775,831 - A4249_RS03665 0.24 -0.2 775,831 - A4249_RS03665 0.24 +0.7 775,831 - A4249_RS03665 0.24 +2.1 775,831 - A4249_RS03665 0.24 -0.1 775,831 - A4249_RS03665 0.24 -0.4 775,831 - A4249_RS03665 0.24 -0.7 775,831 - A4249_RS03665 0.24 +0.7 775,831 - A4249_RS03665 0.24 +0.2 775,831 - A4249_RS03665 0.24 +1.3 775,831 - A4249_RS03665 0.24 +0.2 775,831 - A4249_RS03665 0.24 -1.1 775,831 - A4249_RS03665 0.24 +0.5 775,845 + A4249_RS03665 0.28 -0.8 775,845 + A4249_RS03665 0.28 +1.0 775,846 - A4249_RS03665 0.28 -0.1 775,846 - A4249_RS03665 0.28 +1.1 775,846 - A4249_RS03665 0.28 +0.6 775,846 - A4249_RS03665 0.28 -0.4 776,076 + -0.2 776,077 - -0.6 776,090 + -0.5 776,090 + -1.1 776,091 - +1.9 776,091 - -0.1 776,091 - -1.1 776,135 + +0.3 776,386 + A4249_RS03670 0.37 +1.0 776,387 - A4249_RS03670 0.37 -0.2
Or see this region's nucleotide sequence