Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS03150

Experiment: Tween 20 (C), 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS03145 and A4249_RS03150 overlap by 1 nucleotidesA4249_RS03150 and A4249_RS03155 are separated by 118 nucleotides A4249_RS03145: A4249_RS03145 - CusA/CzcA family heavy metal efflux RND transporter, at 663,156 to 666,376 _RS03145 A4249_RS03150: A4249_RS03150 - cation transporter, at 666,376 to 666,975 _RS03150 A4249_RS03155: A4249_RS03155 - acyltransferase, at 667,094 to 668,260 _RS03155 Position (kb) 666 667Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 665.468 kb on + strand, within A4249_RS03145at 665.468 kb on + strand, within A4249_RS03145at 665.468 kb on + strand, within A4249_RS03145at 665.468 kb on + strand, within A4249_RS03145at 665.468 kb on + strand, within A4249_RS03145at 665.468 kb on + strand, within A4249_RS03145at 665.468 kb on + strand, within A4249_RS03145at 665.469 kb on - strand, within A4249_RS03145at 665.469 kb on - strand, within A4249_RS03145at 665.469 kb on - strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.895 kb on + strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 665.896 kb on - strand, within A4249_RS03145at 666.211 kb on + strandat 666.211 kb on + strandat 666.211 kb on + strandat 666.211 kb on + strandat 666.211 kb on + strandat 666.212 kb on - strandat 666.212 kb on - strandat 666.212 kb on - strandat 666.455 kb on + strand, within A4249_RS03150at 666.456 kb on - strand, within A4249_RS03150at 666.456 kb on - strand, within A4249_RS03150at 666.538 kb on + strand, within A4249_RS03150at 666.538 kb on + strand, within A4249_RS03150at 666.538 kb on + strand, within A4249_RS03150at 666.539 kb on - strand, within A4249_RS03150at 666.539 kb on - strand, within A4249_RS03150at 666.539 kb on - strand, within A4249_RS03150at 666.539 kb on - strand, within A4249_RS03150at 666.539 kb on - strand, within A4249_RS03150at 666.680 kb on + strand, within A4249_RS03150at 666.681 kb on - strand, within A4249_RS03150at 666.681 kb on - strand, within A4249_RS03150at 666.681 kb on - strand, within A4249_RS03150at 666.681 kb on - strand, within A4249_RS03150at 666.891 kb on - strand, within A4249_RS03150at 666.891 kb on - strand, within A4249_RS03150at 666.891 kb on - strand, within A4249_RS03150at 666.891 kb on - strand, within A4249_RS03150at 666.891 kb on - strand, within A4249_RS03150at 666.891 kb on - strand, within A4249_RS03150at 666.991 kb on - strandat 667.056 kb on + strandat 667.082 kb on + strandat 667.082 kb on + strandat 667.082 kb on + strandat 667.083 kb on - strandat 667.083 kb on - strandat 667.083 kb on - strandat 667.083 kb on - strandat 667.199 kb on + strandat 667.199 kb on + strandat 667.199 kb on + strandat 667.199 kb on + strandat 667.199 kb on + strandat 667.262 kb on + strand, within A4249_RS03155at 667.263 kb on - strand, within A4249_RS03155at 667.263 kb on - strand, within A4249_RS03155at 667.263 kb on - strand, within A4249_RS03155at 667.298 kb on + strand, within A4249_RS03155at 667.299 kb on - strand, within A4249_RS03155at 667.316 kb on + strand, within A4249_RS03155at 667.316 kb on + strand, within A4249_RS03155at 667.358 kb on + strand, within A4249_RS03155at 667.358 kb on + strand, within A4249_RS03155at 667.359 kb on - strand, within A4249_RS03155at 667.359 kb on - strand, within A4249_RS03155at 667.359 kb on - strand, within A4249_RS03155at 667.411 kb on + strand, within A4249_RS03155at 667.412 kb on - strand, within A4249_RS03155at 667.586 kb on + strand, within A4249_RS03155at 667.586 kb on + strand, within A4249_RS03155at 667.586 kb on + strand, within A4249_RS03155at 667.587 kb on - strand, within A4249_RS03155at 667.587 kb on - strand, within A4249_RS03155at 667.587 kb on - strand, within A4249_RS03155at 667.587 kb on - strand, within A4249_RS03155at 667.587 kb on - strand, within A4249_RS03155at 667.587 kb on - strand, within A4249_RS03155at 667.712 kb on + strand, within A4249_RS03155at 667.712 kb on + strand, within A4249_RS03155at 667.713 kb on - strand, within A4249_RS03155at 667.713 kb on - strand, within A4249_RS03155at 667.713 kb on - strand, within A4249_RS03155at 667.713 kb on - strand, within A4249_RS03155at 667.784 kb on + strand, within A4249_RS03155at 667.784 kb on + strand, within A4249_RS03155at 667.784 kb on + strand, within A4249_RS03155at 667.784 kb on + strand, within A4249_RS03155at 667.785 kb on - strand, within A4249_RS03155at 667.785 kb on - strand, within A4249_RS03155at 667.785 kb on - strand, within A4249_RS03155at 667.785 kb on - strand, within A4249_RS03155at 667.799 kb on + strand, within A4249_RS03155at 667.799 kb on + strand, within A4249_RS03155at 667.799 kb on + strand, within A4249_RS03155at 667.799 kb on + strand, within A4249_RS03155at 667.799 kb on + strand, within A4249_RS03155at 667.799 kb on + strand, within A4249_RS03155at 667.799 kb on + strand, within A4249_RS03155at 667.800 kb on - strand, within A4249_RS03155at 667.800 kb on - strand, within A4249_RS03155

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 20C
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665,468 + A4249_RS03145 0.72 -0.2
665,468 + A4249_RS03145 0.72 +0.2
665,468 + A4249_RS03145 0.72 -0.1
665,468 + A4249_RS03145 0.72 -1.2
665,468 + A4249_RS03145 0.72 -0.4
665,468 + A4249_RS03145 0.72 +0.7
665,468 + A4249_RS03145 0.72 -0.4
665,469 - A4249_RS03145 0.72 -1.0
665,469 - A4249_RS03145 0.72 -0.2
665,469 - A4249_RS03145 0.72 -0.4
665,895 + A4249_RS03145 0.85 +1.7
665,895 + A4249_RS03145 0.85 +0.4
665,895 + A4249_RS03145 0.85 -0.2
665,895 + A4249_RS03145 0.85 +0.4
665,895 + A4249_RS03145 0.85 +1.9
665,895 + A4249_RS03145 0.85 -0.0
665,895 + A4249_RS03145 0.85 -0.8
665,895 + A4249_RS03145 0.85 -2.7
665,896 - A4249_RS03145 0.85 +0.8
665,896 - A4249_RS03145 0.85 +1.7
665,896 - A4249_RS03145 0.85 -1.7
665,896 - A4249_RS03145 0.85 +0.2
665,896 - A4249_RS03145 0.85 -0.4
665,896 - A4249_RS03145 0.85 +1.0
665,896 - A4249_RS03145 0.85 -1.3
665,896 - A4249_RS03145 0.85 -0.9
665,896 - A4249_RS03145 0.85 -3.0
666,211 + -0.2
666,211 + -0.5
666,211 + -0.2
666,211 + -0.4
666,211 + -0.1
666,212 - +0.6
666,212 - -0.1
666,212 - -1.4
666,455 + A4249_RS03150 0.13 +0.5
666,456 - A4249_RS03150 0.13 +1.9
666,456 - A4249_RS03150 0.13 +1.5
666,538 + A4249_RS03150 0.27 -0.1
666,538 + A4249_RS03150 0.27 +0.8
666,538 + A4249_RS03150 0.27 +0.2
666,539 - A4249_RS03150 0.27 -0.1
666,539 - A4249_RS03150 0.27 +0.2
666,539 - A4249_RS03150 0.27 -0.5
666,539 - A4249_RS03150 0.27 +1.3
666,539 - A4249_RS03150 0.27 +2.3
666,680 + A4249_RS03150 0.51 +1.0
666,681 - A4249_RS03150 0.51 +1.8
666,681 - A4249_RS03150 0.51 +0.3
666,681 - A4249_RS03150 0.51 -0.3
666,681 - A4249_RS03150 0.51 +1.7
666,891 - A4249_RS03150 0.86 -0.1
666,891 - A4249_RS03150 0.86 +0.4
666,891 - A4249_RS03150 0.86 -0.2
666,891 - A4249_RS03150 0.86 -1.7
666,891 - A4249_RS03150 0.86 +0.6
666,891 - A4249_RS03150 0.86 +1.2
666,991 - +0.0
667,056 + -0.6
667,082 + +1.6
667,082 + +1.8
667,082 + -1.4
667,083 - +1.5
667,083 - +0.2
667,083 - -1.9
667,083 - -0.1
667,199 + -1.0
667,199 + -1.1
667,199 + +0.5
667,199 + -1.8
667,199 + -0.1
667,262 + A4249_RS03155 0.14 +0.0
667,263 - A4249_RS03155 0.14 +1.2
667,263 - A4249_RS03155 0.14 -0.7
667,263 - A4249_RS03155 0.14 -0.1
667,298 + A4249_RS03155 0.17 -0.4
667,299 - A4249_RS03155 0.18 +1.5
667,316 + A4249_RS03155 0.19 +0.4
667,316 + A4249_RS03155 0.19 -1.1
667,358 + A4249_RS03155 0.23 -1.4
667,358 + A4249_RS03155 0.23 +1.1
667,359 - A4249_RS03155 0.23 -0.6
667,359 - A4249_RS03155 0.23 +0.7
667,359 - A4249_RS03155 0.23 +0.4
667,411 + A4249_RS03155 0.27 +0.1
667,412 - A4249_RS03155 0.27 -0.1
667,586 + A4249_RS03155 0.42 -0.5
667,586 + A4249_RS03155 0.42 -0.3
667,586 + A4249_RS03155 0.42 +0.0
667,587 - A4249_RS03155 0.42 +0.5
667,587 - A4249_RS03155 0.42 +0.3
667,587 - A4249_RS03155 0.42 +0.4
667,587 - A4249_RS03155 0.42 +0.7
667,587 - A4249_RS03155 0.42 +0.1
667,587 - A4249_RS03155 0.42 -0.6
667,712 + A4249_RS03155 0.53 +0.0
667,712 + A4249_RS03155 0.53 -1.1
667,713 - A4249_RS03155 0.53 -0.4
667,713 - A4249_RS03155 0.53 +0.5
667,713 - A4249_RS03155 0.53 +0.4
667,713 - A4249_RS03155 0.53 -0.4
667,784 + A4249_RS03155 0.59 -0.1
667,784 + A4249_RS03155 0.59 -1.3
667,784 + A4249_RS03155 0.59 -0.1
667,784 + A4249_RS03155 0.59 -0.5
667,785 - A4249_RS03155 0.59 +2.7
667,785 - A4249_RS03155 0.59 -2.6
667,785 - A4249_RS03155 0.59 +1.5
667,785 - A4249_RS03155 0.59 +1.0
667,799 + A4249_RS03155 0.60 +0.7
667,799 + A4249_RS03155 0.60 -0.8
667,799 + A4249_RS03155 0.60 +0.1
667,799 + A4249_RS03155 0.60 +0.2
667,799 + A4249_RS03155 0.60 +1.3
667,799 + A4249_RS03155 0.60 -0.2
667,799 + A4249_RS03155 0.60 -1.7
667,800 - A4249_RS03155 0.60 +1.4
667,800 - A4249_RS03155 0.60 -0.7

Or see this region's nucleotide sequence