Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS02465

Experiment: Tween 20 (C), 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS02455 and A4249_RS16480 are separated by 5 nucleotidesA4249_RS16480 and A4249_RS02465 are separated by 35 nucleotidesA4249_RS02465 and A4249_RS02475 are separated by 60 nucleotides A4249_RS02455: A4249_RS02455 - acyl-CoA carboxylase subunit beta, at 527,247 to 528,782 _RS02455 A4249_RS16480: A4249_RS16480 - hypothetical protein, at 528,788 to 529,579 _RS16480 A4249_RS02465: A4249_RS02465 - acetyl/propionyl/methylcrotonyl-CoA carboxylase subunit alpha, at 529,615 to 531,357 _RS02465 A4249_RS02475: A4249_RS02475 - IS3 family transposase, at 531,418 to 532,607 _RS02475 Position (kb) 529 530 531 532Strain fitness (log2 ratio) -4 -3 -2 -1 0 1 2 3at 528.618 kb on + strand, within A4249_RS02455at 528.618 kb on + strand, within A4249_RS02455at 528.619 kb on - strand, within A4249_RS02455at 528.663 kb on + strandat 528.663 kb on + strandat 528.663 kb on + strandat 528.664 kb on - strandat 528.664 kb on - strandat 528.666 kb on - strandat 528.770 kb on + strandat 528.770 kb on + strandat 528.771 kb on - strandat 528.771 kb on - strandat 528.783 kb on + strandat 528.784 kb on - strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.785 kb on + strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.786 kb on - strandat 528.834 kb on + strandat 528.834 kb on + strandat 528.835 kb on - strandat 528.860 kb on + strandat 528.861 kb on - strandat 528.861 kb on - strandat 528.904 kb on + strand, within A4249_RS16480at 528.904 kb on + strand, within A4249_RS16480at 528.904 kb on + strand, within A4249_RS16480at 528.905 kb on - strand, within A4249_RS16480at 528.923 kb on - strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.953 kb on + strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.954 kb on - strand, within A4249_RS16480at 528.964 kb on + strand, within A4249_RS16480at 528.965 kb on - strand, within A4249_RS16480at 528.965 kb on - strand, within A4249_RS16480at 529.071 kb on + strand, within A4249_RS16480at 529.071 kb on + strand, within A4249_RS16480at 529.071 kb on + strand, within A4249_RS16480at 529.071 kb on + strand, within A4249_RS16480at 529.071 kb on + strand, within A4249_RS16480at 529.072 kb on - strand, within A4249_RS16480at 529.072 kb on - strand, within A4249_RS16480at 529.072 kb on - strand, within A4249_RS16480at 529.072 kb on - strand, within A4249_RS16480at 529.072 kb on - strand, within A4249_RS16480at 529.072 kb on - strand, within A4249_RS16480at 529.072 kb on - strand, within A4249_RS16480at 529.158 kb on + strand, within A4249_RS16480at 529.158 kb on + strand, within A4249_RS16480at 529.158 kb on + strand, within A4249_RS16480at 529.158 kb on + strand, within A4249_RS16480at 529.158 kb on + strand, within A4249_RS16480at 529.159 kb on - strand, within A4249_RS16480at 529.159 kb on - strand, within A4249_RS16480at 529.159 kb on - strand, within A4249_RS16480at 529.159 kb on - strand, within A4249_RS16480at 529.159 kb on - strand, within A4249_RS16480at 529.159 kb on - strand, within A4249_RS16480at 529.177 kb on - strand, within A4249_RS16480at 529.177 kb on - strand, within A4249_RS16480at 529.177 kb on - strand, within A4249_RS16480at 529.177 kb on - strand, within A4249_RS16480at 529.192 kb on + strand, within A4249_RS16480at 529.235 kb on + strand, within A4249_RS16480at 529.235 kb on + strand, within A4249_RS16480at 529.235 kb on + strand, within A4249_RS16480at 529.236 kb on - strand, within A4249_RS16480at 529.236 kb on - strand, within A4249_RS16480at 529.271 kb on + strand, within A4249_RS16480at 529.271 kb on + strand, within A4249_RS16480at 529.271 kb on + strand, within A4249_RS16480at 529.272 kb on - strand, within A4249_RS16480at 529.272 kb on - strand, within A4249_RS16480at 529.272 kb on - strand, within A4249_RS16480at 529.273 kb on + strand, within A4249_RS16480at 529.274 kb on - strand, within A4249_RS16480at 529.274 kb on - strand, within A4249_RS16480at 529.282 kb on + strand, within A4249_RS16480at 529.282 kb on + strand, within A4249_RS16480at 529.282 kb on + strand, within A4249_RS16480at 529.283 kb on - strand, within A4249_RS16480at 529.285 kb on + strand, within A4249_RS16480at 529.383 kb on + strand, within A4249_RS16480at 529.421 kb on + strand, within A4249_RS16480at 529.421 kb on + strand, within A4249_RS16480at 529.421 kb on + strand, within A4249_RS16480at 529.422 kb on - strand, within A4249_RS16480at 529.436 kb on - strand, within A4249_RS16480at 529.513 kb on + strandat 529.521 kb on + strandat 529.522 kb on - strandat 529.522 kb on - strandat 529.577 kb on + strandat 529.578 kb on - strandat 529.578 kb on - strandat 529.578 kb on - strandat 529.591 kb on + strandat 529.591 kb on + strandat 529.592 kb on - strandat 529.592 kb on - strandat 529.595 kb on + strandat 529.595 kb on + strandat 529.595 kb on + strandat 529.595 kb on + strandat 529.596 kb on - strandat 529.596 kb on - strandat 529.708 kb on + strandat 529.792 kb on + strand, within A4249_RS02465at 529.792 kb on + strand, within A4249_RS02465at 529.792 kb on + strand, within A4249_RS02465at 529.792 kb on + strand, within A4249_RS02465at 529.792 kb on + strand, within A4249_RS02465at 529.793 kb on - strand, within A4249_RS02465at 529.793 kb on - strand, within A4249_RS02465at 529.793 kb on - strand, within A4249_RS02465at 529.793 kb on - strand, within A4249_RS02465at 530.016 kb on + strand, within A4249_RS02465at 530.016 kb on + strand, within A4249_RS02465at 530.416 kb on + strand, within A4249_RS02465at 530.416 kb on + strand, within A4249_RS02465at 530.416 kb on + strand, within A4249_RS02465at 530.416 kb on + strand, within A4249_RS02465at 530.416 kb on + strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.417 kb on - strand, within A4249_RS02465at 530.632 kb on + strand, within A4249_RS02465at 530.632 kb on + strand, within A4249_RS02465at 530.633 kb on - strand, within A4249_RS02465at 530.633 kb on - strand, within A4249_RS02465at 530.633 kb on - strand, within A4249_RS02465at 530.633 kb on - strand, within A4249_RS02465at 530.687 kb on - strand, within A4249_RS02465at 530.687 kb on - strand, within A4249_RS02465at 530.719 kb on + strand, within A4249_RS02465at 530.719 kb on + strand, within A4249_RS02465at 530.719 kb on + strand, within A4249_RS02465at 530.719 kb on + strand, within A4249_RS02465at 530.719 kb on + strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.720 kb on - strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.773 kb on + strand, within A4249_RS02465at 530.774 kb on - strand, within A4249_RS02465at 530.774 kb on - strand, within A4249_RS02465at 530.774 kb on - strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.947 kb on + strand, within A4249_RS02465at 530.948 kb on - strand, within A4249_RS02465at 530.948 kb on - strand, within A4249_RS02465at 530.948 kb on - strand, within A4249_RS02465at 530.948 kb on - strand, within A4249_RS02465at 530.948 kb on - strand, within A4249_RS02465at 530.948 kb on - strand, within A4249_RS02465at 530.948 kb on - strand, within A4249_RS02465at 530.949 kb on + strand, within A4249_RS02465at 530.949 kb on + strand, within A4249_RS02465at 530.949 kb on + strand, within A4249_RS02465at 530.949 kb on + strand, within A4249_RS02465at 530.949 kb on + strand, within A4249_RS02465at 530.949 kb on + strand, within A4249_RS02465at 530.949 kb on + strand, within A4249_RS02465at 530.950 kb on - strand, within A4249_RS02465at 530.950 kb on - strand, within A4249_RS02465at 531.130 kb on + strand, within A4249_RS02465at 531.130 kb on + strand, within A4249_RS02465at 531.131 kb on - strand, within A4249_RS02465at 531.346 kb on + strandat 531.346 kb on + strandat 531.347 kb on - strandat 531.347 kb on - strandat 531.347 kb on - strandat 531.347 kb on - strandat 531.386 kb on - strandat 531.386 kb on - strandat 531.386 kb on - strandat 531.386 kb on - strandat 531.390 kb on - strandat 531.390 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction Tween 20 (C), 20C
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528,618 + A4249_RS02455 0.89 +0.4
528,618 + A4249_RS02455 0.89 -0.7
528,619 - A4249_RS02455 0.89 -0.5
528,663 + +0.1
528,663 + -0.2
528,663 + +2.4
528,664 - -1.0
528,664 - -0.7
528,666 - -1.0
528,770 + -1.0
528,770 + +0.5
528,771 - +0.3
528,771 - -1.0
528,783 + -0.4
528,784 - -0.0
528,785 + -2.2
528,785 + -1.0
528,785 + +1.2
528,785 + -0.0
528,785 + -2.2
528,785 + -0.8
528,785 + +0.2
528,785 + -0.0
528,785 + +0.5
528,785 + +0.1
528,785 + -0.3
528,786 - +1.4
528,786 - -0.9
528,786 - -3.3
528,786 - -1.2
528,786 - -0.9
528,786 - -1.0
528,786 - +0.6
528,786 - +0.2
528,786 - +1.0
528,786 - -0.7
528,786 - +2.3
528,786 - -0.0
528,786 - -0.4
528,834 + +0.1
528,834 + +0.1
528,835 - +2.0
528,860 + -1.3
528,861 - +0.3
528,861 - -2.3
528,904 + A4249_RS16480 0.15 +0.1
528,904 + A4249_RS16480 0.15 -0.3
528,904 + A4249_RS16480 0.15 -0.2
528,905 - A4249_RS16480 0.15 -0.0
528,923 - A4249_RS16480 0.17 +0.2
528,953 + A4249_RS16480 0.21 -1.6
528,953 + A4249_RS16480 0.21 +2.1
528,953 + A4249_RS16480 0.21 +0.4
528,953 + A4249_RS16480 0.21 -0.3
528,953 + A4249_RS16480 0.21 +1.4
528,953 + A4249_RS16480 0.21 +1.2
528,953 + A4249_RS16480 0.21 +1.0
528,953 + A4249_RS16480 0.21 -1.3
528,953 + A4249_RS16480 0.21 +0.5
528,954 - A4249_RS16480 0.21 -0.5
528,954 - A4249_RS16480 0.21 +0.5
528,954 - A4249_RS16480 0.21 -0.0
528,954 - A4249_RS16480 0.21 +1.1
528,954 - A4249_RS16480 0.21 -0.7
528,954 - A4249_RS16480 0.21 -1.1
528,954 - A4249_RS16480 0.21 +1.0
528,954 - A4249_RS16480 0.21 +0.3
528,954 - A4249_RS16480 0.21 +2.0
528,954 - A4249_RS16480 0.21 -0.6
528,964 + A4249_RS16480 0.22 -0.8
528,965 - A4249_RS16480 0.22 -0.4
528,965 - A4249_RS16480 0.22 -2.7
529,071 + A4249_RS16480 0.36 -1.6
529,071 + A4249_RS16480 0.36 -0.0
529,071 + A4249_RS16480 0.36 +0.6
529,071 + A4249_RS16480 0.36 -0.8
529,071 + A4249_RS16480 0.36 +0.6
529,072 - A4249_RS16480 0.36 +0.3
529,072 - A4249_RS16480 0.36 -2.6
529,072 - A4249_RS16480 0.36 -0.0
529,072 - A4249_RS16480 0.36 -1.2
529,072 - A4249_RS16480 0.36 -1.0
529,072 - A4249_RS16480 0.36 +0.1
529,072 - A4249_RS16480 0.36 -1.3
529,158 + A4249_RS16480 0.47 +3.0
529,158 + A4249_RS16480 0.47 +2.0
529,158 + A4249_RS16480 0.47 -1.0
529,158 + A4249_RS16480 0.47 +1.0
529,158 + A4249_RS16480 0.47 -0.4
529,159 - A4249_RS16480 0.47 -1.6
529,159 - A4249_RS16480 0.47 -1.6
529,159 - A4249_RS16480 0.47 -1.0
529,159 - A4249_RS16480 0.47 -0.6
529,159 - A4249_RS16480 0.47 -2.0
529,159 - A4249_RS16480 0.47 +0.3
529,177 - A4249_RS16480 0.49 -1.6
529,177 - A4249_RS16480 0.49 -0.0
529,177 - A4249_RS16480 0.49 -2.0
529,177 - A4249_RS16480 0.49 +1.1
529,192 + A4249_RS16480 0.51 -0.2
529,235 + A4249_RS16480 0.56 -0.0
529,235 + A4249_RS16480 0.56 -0.2
529,235 + A4249_RS16480 0.56 -0.6
529,236 - A4249_RS16480 0.57 +0.2
529,236 - A4249_RS16480 0.57 +0.6
529,271 + A4249_RS16480 0.61 -0.8
529,271 + A4249_RS16480 0.61 +0.9
529,271 + A4249_RS16480 0.61 +0.6
529,272 - A4249_RS16480 0.61 -1.6
529,272 - A4249_RS16480 0.61 -1.6
529,272 - A4249_RS16480 0.61 -2.3
529,273 + A4249_RS16480 0.61 -1.6
529,274 - A4249_RS16480 0.61 -0.0
529,274 - A4249_RS16480 0.61 +0.3
529,282 + A4249_RS16480 0.62 -0.6
529,282 + A4249_RS16480 0.62 +0.6
529,282 + A4249_RS16480 0.62 -0.0
529,283 - A4249_RS16480 0.62 -0.4
529,285 + A4249_RS16480 0.63 +1.3
529,383 + A4249_RS16480 0.75 -0.1
529,421 + A4249_RS16480 0.80 -0.5
529,421 + A4249_RS16480 0.80 +0.2
529,421 + A4249_RS16480 0.80 -0.1
529,422 - A4249_RS16480 0.80 +0.2
529,436 - A4249_RS16480 0.82 +1.4
529,513 + +0.1
529,521 + +0.2
529,522 - +0.4
529,522 - +1.3
529,577 + +1.3
529,578 - -0.0
529,578 - -0.0
529,578 - +0.6
529,591 + -0.1
529,591 + -0.0
529,592 - -0.0
529,592 - -0.6
529,595 + -0.4
529,595 + +3.7
529,595 + -0.7
529,595 + -0.4
529,596 - -1.0
529,596 - -0.0
529,708 + -0.6
529,792 + A4249_RS02465 0.10 +1.0
529,792 + A4249_RS02465 0.10 -0.6
529,792 + A4249_RS02465 0.10 +0.6
529,792 + A4249_RS02465 0.10 +0.6
529,792 + A4249_RS02465 0.10 -1.2
529,793 - A4249_RS02465 0.10 -0.4
529,793 - A4249_RS02465 0.10 +0.2
529,793 - A4249_RS02465 0.10 +0.5
529,793 - A4249_RS02465 0.10 +0.7
530,016 + A4249_RS02465 0.23 +1.0
530,016 + A4249_RS02465 0.23 -0.0
530,416 + A4249_RS02465 0.46 -1.3
530,416 + A4249_RS02465 0.46 -0.4
530,416 + A4249_RS02465 0.46 -0.0
530,416 + A4249_RS02465 0.46 +0.5
530,416 + A4249_RS02465 0.46 +1.3
530,417 - A4249_RS02465 0.46 -0.3
530,417 - A4249_RS02465 0.46 -0.9
530,417 - A4249_RS02465 0.46 -0.6
530,417 - A4249_RS02465 0.46 +2.0
530,417 - A4249_RS02465 0.46 -1.6
530,417 - A4249_RS02465 0.46 -0.1
530,417 - A4249_RS02465 0.46 -0.4
530,417 - A4249_RS02465 0.46 -0.9
530,632 + A4249_RS02465 0.58 -0.1
530,632 + A4249_RS02465 0.58 -1.8
530,633 - A4249_RS02465 0.58 -1.2
530,633 - A4249_RS02465 0.58 -1.3
530,633 - A4249_RS02465 0.58 +0.2
530,633 - A4249_RS02465 0.58 +0.8
530,687 - A4249_RS02465 0.62 -4.0
530,687 - A4249_RS02465 0.62 -0.1
530,719 + A4249_RS02465 0.63 -0.3
530,719 + A4249_RS02465 0.63 -1.0
530,719 + A4249_RS02465 0.63 -0.3
530,719 + A4249_RS02465 0.63 -0.4
530,719 + A4249_RS02465 0.63 -0.4
530,720 - A4249_RS02465 0.63 -0.6
530,720 - A4249_RS02465 0.63 -1.6
530,720 - A4249_RS02465 0.63 -1.6
530,720 - A4249_RS02465 0.63 +0.2
530,720 - A4249_RS02465 0.63 +1.6
530,720 - A4249_RS02465 0.63 -0.2
530,720 - A4249_RS02465 0.63 -0.0
530,720 - A4249_RS02465 0.63 +1.0
530,773 + A4249_RS02465 0.66 -1.3
530,773 + A4249_RS02465 0.66 -1.3
530,773 + A4249_RS02465 0.66 -2.0
530,773 + A4249_RS02465 0.66 -0.7
530,773 + A4249_RS02465 0.66 -0.2
530,773 + A4249_RS02465 0.66 -1.0
530,773 + A4249_RS02465 0.66 +0.8
530,773 + A4249_RS02465 0.66 -2.3
530,774 - A4249_RS02465 0.66 -1.0
530,774 - A4249_RS02465 0.66 +1.7
530,774 - A4249_RS02465 0.66 -0.9
530,947 + A4249_RS02465 0.76 +0.2
530,947 + A4249_RS02465 0.76 -2.1
530,947 + A4249_RS02465 0.76 +0.1
530,947 + A4249_RS02465 0.76 -0.0
530,947 + A4249_RS02465 0.76 -0.3
530,947 + A4249_RS02465 0.76 -0.3
530,947 + A4249_RS02465 0.76 +1.3
530,947 + A4249_RS02465 0.76 -0.0
530,947 + A4249_RS02465 0.76 +0.1
530,947 + A4249_RS02465 0.76 +0.3
530,947 + A4249_RS02465 0.76 +2.0
530,947 + A4249_RS02465 0.76 -0.4
530,947 + A4249_RS02465 0.76 -0.8
530,947 + A4249_RS02465 0.76 +0.6
530,947 + A4249_RS02465 0.76 -1.5
530,947 + A4249_RS02465 0.76 -0.0
530,947 + A4249_RS02465 0.76 -2.3
530,948 - A4249_RS02465 0.76 +1.2
530,948 - A4249_RS02465 0.76 -1.2
530,948 - A4249_RS02465 0.76 -2.0
530,948 - A4249_RS02465 0.76 +0.4
530,948 - A4249_RS02465 0.76 -0.8
530,948 - A4249_RS02465 0.76 -1.3
530,948 - A4249_RS02465 0.76 -0.0
530,949 + A4249_RS02465 0.77 -0.2
530,949 + A4249_RS02465 0.77 -0.8
530,949 + A4249_RS02465 0.77 -0.8
530,949 + A4249_RS02465 0.77 -1.7
530,949 + A4249_RS02465 0.77 -1.0
530,949 + A4249_RS02465 0.77 +0.7
530,949 + A4249_RS02465 0.77 -0.1
530,950 - A4249_RS02465 0.77 -0.0
530,950 - A4249_RS02465 0.77 -0.0
531,130 + A4249_RS02465 0.87 +0.6
531,130 + A4249_RS02465 0.87 -0.7
531,131 - A4249_RS02465 0.87 -2.3
531,346 + +0.7
531,346 + +1.4
531,347 - +0.2
531,347 - -0.5
531,347 - +1.0
531,347 - -2.0
531,386 - +1.0
531,386 - +0.5
531,386 - +0.4
531,386 - -0.0
531,390 - -0.0
531,390 - +0.3

Or see this region's nucleotide sequence