Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS02325 and A4249_RS02330 are separated by 87 nucleotides A4249_RS02330 and A4249_RS02335 are separated by 87 nucleotides A4249_RS02335 and A4249_RS02340 are separated by 172 nucleotides A4249_RS02340 and A4249_RS02345 are separated by 137 nucleotides
A4249_RS02325: A4249_RS02325 - 23S ribosomal RNA, at 490,399 to 493,177
_RS02325
A4249_RS02330: A4249_RS02330 - 5S ribosomal RNA, at 493,265 to 493,379
_RS02330
A4249_RS02335: A4249_RS02335 - tRNA-Met, at 493,467 to 493,543
_RS02335
A4249_RS02340: A4249_RS02340 - helicase-related protein, at 493,716 to 497,021
_RS02340
A4249_RS02345: A4249_RS02345 - alpha/beta hydrolase, at 497,159 to 498,517
_RS02345
Position (kb) 493
494
495
496
497
498 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 493.611 kb on - strand at 493.638 kb on - strand at 493.638 kb on - strand at 493.638 kb on - strand at 494.062 kb on + strand, within A4249_RS02340 at 494.062 kb on + strand, within A4249_RS02340 at 494.062 kb on + strand, within A4249_RS02340 at 494.062 kb on + strand, within A4249_RS02340 at 494.062 kb on + strand, within A4249_RS02340 at 494.062 kb on + strand, within A4249_RS02340 at 494.063 kb on - strand, within A4249_RS02340 at 494.199 kb on - strand, within A4249_RS02340 at 494.199 kb on - strand, within A4249_RS02340 at 494.199 kb on - strand, within A4249_RS02340 at 494.205 kb on + strand, within A4249_RS02340 at 494.206 kb on - strand, within A4249_RS02340 at 494.242 kb on - strand, within A4249_RS02340 at 494.242 kb on - strand, within A4249_RS02340 at 494.242 kb on - strand, within A4249_RS02340 at 494.242 kb on - strand, within A4249_RS02340 at 494.506 kb on + strand, within A4249_RS02340 at 494.506 kb on + strand, within A4249_RS02340 at 494.507 kb on - strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.580 kb on + strand, within A4249_RS02340 at 494.581 kb on - strand, within A4249_RS02340 at 494.581 kb on - strand, within A4249_RS02340 at 494.581 kb on - strand, within A4249_RS02340 at 494.581 kb on - strand, within A4249_RS02340 at 494.637 kb on + strand, within A4249_RS02340 at 494.637 kb on + strand, within A4249_RS02340 at 494.637 kb on + strand, within A4249_RS02340 at 494.637 kb on + strand, within A4249_RS02340 at 494.637 kb on + strand, within A4249_RS02340 at 494.637 kb on + strand, within A4249_RS02340 at 494.638 kb on - strand, within A4249_RS02340 at 494.638 kb on - strand, within A4249_RS02340 at 494.638 kb on - strand, within A4249_RS02340 at 494.638 kb on - strand, within A4249_RS02340 at 494.638 kb on - strand, within A4249_RS02340 at 494.638 kb on - strand, within A4249_RS02340 at 494.638 kb on - strand, within A4249_RS02340 at 494.830 kb on + strand, within A4249_RS02340 at 494.830 kb on + strand, within A4249_RS02340 at 494.830 kb on + strand, within A4249_RS02340 at 494.830 kb on + strand, within A4249_RS02340 at 494.831 kb on - strand, within A4249_RS02340 at 494.831 kb on - strand, within A4249_RS02340 at 494.831 kb on - strand, within A4249_RS02340 at 494.831 kb on - strand, within A4249_RS02340 at 494.831 kb on - strand, within A4249_RS02340 at 494.854 kb on + strand, within A4249_RS02340 at 494.858 kb on + strand, within A4249_RS02340 at 494.858 kb on + strand, within A4249_RS02340 at 494.859 kb on - strand, within A4249_RS02340 at 494.923 kb on + strand, within A4249_RS02340 at 494.924 kb on - strand, within A4249_RS02340 at 494.992 kb on + strand, within A4249_RS02340 at 494.992 kb on + strand, within A4249_RS02340 at 494.992 kb on + strand, within A4249_RS02340 at 494.992 kb on + strand, within A4249_RS02340 at 494.992 kb on + strand, within A4249_RS02340 at 494.992 kb on + strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 494.993 kb on - strand, within A4249_RS02340 at 495.162 kb on + strand, within A4249_RS02340 at 495.163 kb on - strand, within A4249_RS02340 at 495.163 kb on - strand, within A4249_RS02340 at 495.220 kb on - strand, within A4249_RS02340 at 495.260 kb on + strand, within A4249_RS02340 at 495.948 kb on - strand, within A4249_RS02340 at 496.079 kb on + strand, within A4249_RS02340 at 496.102 kb on + strand, within A4249_RS02340 at 496.102 kb on + strand, within A4249_RS02340 at 496.102 kb on + strand, within A4249_RS02340 at 496.102 kb on + strand, within A4249_RS02340 at 496.102 kb on + strand, within A4249_RS02340 at 496.103 kb on - strand, within A4249_RS02340 at 496.103 kb on - strand, within A4249_RS02340 at 496.103 kb on - strand, within A4249_RS02340 at 496.223 kb on + strand, within A4249_RS02340 at 496.223 kb on + strand, within A4249_RS02340 at 496.223 kb on + strand, within A4249_RS02340 at 496.223 kb on + strand, within A4249_RS02340 at 496.223 kb on + strand, within A4249_RS02340 at 496.224 kb on - strand, within A4249_RS02340 at 496.224 kb on - strand, within A4249_RS02340 at 496.224 kb on - strand, within A4249_RS02340 at 496.224 kb on - strand, within A4249_RS02340 at 496.224 kb on - strand, within A4249_RS02340 at 496.259 kb on + strand, within A4249_RS02340 at 496.259 kb on + strand, within A4249_RS02340 at 496.260 kb on - strand, within A4249_RS02340 at 496.260 kb on - strand, within A4249_RS02340 at 496.260 kb on - strand, within A4249_RS02340 at 496.353 kb on + strand, within A4249_RS02340 at 496.353 kb on + strand, within A4249_RS02340 at 496.353 kb on + strand, within A4249_RS02340 at 496.354 kb on - strand, within A4249_RS02340 at 496.354 kb on - strand, within A4249_RS02340 at 496.354 kb on - strand, within A4249_RS02340 at 496.354 kb on - strand, within A4249_RS02340 at 496.537 kb on + strand, within A4249_RS02340 at 496.537 kb on + strand, within A4249_RS02340 at 496.537 kb on + strand, within A4249_RS02340 at 496.537 kb on + strand, within A4249_RS02340 at 496.537 kb on + strand, within A4249_RS02340 at 496.537 kb on + strand, within A4249_RS02340 at 496.537 kb on + strand, within A4249_RS02340 at 496.538 kb on - strand, within A4249_RS02340 at 496.538 kb on - strand, within A4249_RS02340 at 496.538 kb on - strand, within A4249_RS02340 at 496.538 kb on - strand, within A4249_RS02340 at 496.539 kb on + strand, within A4249_RS02340 at 496.539 kb on + strand, within A4249_RS02340 at 496.539 kb on + strand, within A4249_RS02340 at 496.539 kb on + strand, within A4249_RS02340 at 496.539 kb on + strand, within A4249_RS02340 at 496.540 kb on - strand, within A4249_RS02340 at 496.540 kb on - strand, within A4249_RS02340 at 496.540 kb on - strand, within A4249_RS02340 at 496.540 kb on - strand, within A4249_RS02340 at 496.540 kb on - strand, within A4249_RS02340 at 496.540 kb on - strand, within A4249_RS02340 at 496.573 kb on + strand, within A4249_RS02340 at 496.573 kb on + strand, within A4249_RS02340 at 496.574 kb on - strand, within A4249_RS02340 at 496.574 kb on - strand, within A4249_RS02340 at 496.612 kb on + strand, within A4249_RS02340 at 496.612 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.647 kb on + strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.648 kb on - strand, within A4249_RS02340 at 496.680 kb on + strand, within A4249_RS02340 at 496.680 kb on + strand, within A4249_RS02340 at 496.680 kb on + strand, within A4249_RS02340 at 496.681 kb on - strand, within A4249_RS02340 at 497.209 kb on + strand at 497.210 kb on - strand at 497.210 kb on - strand at 497.210 kb on - strand at 497.210 kb on - strand at 497.309 kb on + strand, within A4249_RS02345 at 497.454 kb on + strand, within A4249_RS02345 at 497.455 kb on - strand, within A4249_RS02345 at 497.455 kb on - strand, within A4249_RS02345 at 497.455 kb on - strand, within A4249_RS02345 at 497.455 kb on - strand, within A4249_RS02345 at 497.455 kb on - strand, within A4249_RS02345 at 497.534 kb on - strand, within A4249_RS02345 at 497.599 kb on + strand, within A4249_RS02345 at 497.600 kb on - strand, within A4249_RS02345 at 497.813 kb on + strand, within A4249_RS02345 at 497.898 kb on + strand, within A4249_RS02345 at 497.899 kb on - strand, within A4249_RS02345
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 493,611 - +1.3 493,638 - -0.5 493,638 - +0.4 493,638 - -1.3 494,062 + A4249_RS02340 0.10 -0.4 494,062 + A4249_RS02340 0.10 -1.7 494,062 + A4249_RS02340 0.10 +2.2 494,062 + A4249_RS02340 0.10 +0.2 494,062 + A4249_RS02340 0.10 +1.1 494,062 + A4249_RS02340 0.10 +0.1 494,063 - A4249_RS02340 0.10 -0.0 494,199 - A4249_RS02340 0.15 +0.3 494,199 - A4249_RS02340 0.15 -0.0 494,199 - A4249_RS02340 0.15 -2.3 494,205 + A4249_RS02340 0.15 +0.5 494,206 - A4249_RS02340 0.15 -0.0 494,242 - A4249_RS02340 0.16 +2.0 494,242 - A4249_RS02340 0.16 -0.0 494,242 - A4249_RS02340 0.16 +0.2 494,242 - A4249_RS02340 0.16 +0.7 494,506 + A4249_RS02340 0.24 -1.0 494,506 + A4249_RS02340 0.24 -0.6 494,507 - A4249_RS02340 0.24 +1.2 494,580 + A4249_RS02340 0.26 -0.0 494,580 + A4249_RS02340 0.26 -0.2 494,580 + A4249_RS02340 0.26 +1.0 494,580 + A4249_RS02340 0.26 +0.8 494,580 + A4249_RS02340 0.26 +0.4 494,580 + A4249_RS02340 0.26 -0.0 494,580 + A4249_RS02340 0.26 +0.4 494,580 + A4249_RS02340 0.26 -0.8 494,580 + A4249_RS02340 0.26 +0.1 494,581 - A4249_RS02340 0.26 +1.6 494,581 - A4249_RS02340 0.26 -0.3 494,581 - A4249_RS02340 0.26 +0.8 494,581 - A4249_RS02340 0.26 -0.7 494,637 + A4249_RS02340 0.28 -0.9 494,637 + A4249_RS02340 0.28 -2.3 494,637 + A4249_RS02340 0.28 +0.6 494,637 + A4249_RS02340 0.28 +1.2 494,637 + A4249_RS02340 0.28 +0.8 494,637 + A4249_RS02340 0.28 -0.8 494,638 - A4249_RS02340 0.28 +0.6 494,638 - A4249_RS02340 0.28 -0.2 494,638 - A4249_RS02340 0.28 -0.3 494,638 - A4249_RS02340 0.28 -1.9 494,638 - A4249_RS02340 0.28 +0.8 494,638 - A4249_RS02340 0.28 +0.2 494,638 - A4249_RS02340 0.28 -0.6 494,830 + A4249_RS02340 0.34 -1.1 494,830 + A4249_RS02340 0.34 +1.3 494,830 + A4249_RS02340 0.34 +1.8 494,830 + A4249_RS02340 0.34 -0.6 494,831 - A4249_RS02340 0.34 -0.3 494,831 - A4249_RS02340 0.34 -1.1 494,831 - A4249_RS02340 0.34 -0.0 494,831 - A4249_RS02340 0.34 +0.1 494,831 - A4249_RS02340 0.34 -0.0 494,854 + A4249_RS02340 0.34 +1.0 494,858 + A4249_RS02340 0.35 -0.8 494,858 + A4249_RS02340 0.35 -1.6 494,859 - A4249_RS02340 0.35 +0.5 494,923 + A4249_RS02340 0.37 -0.0 494,924 - A4249_RS02340 0.37 +1.4 494,992 + A4249_RS02340 0.39 -1.0 494,992 + A4249_RS02340 0.39 -0.5 494,992 + A4249_RS02340 0.39 -1.6 494,992 + A4249_RS02340 0.39 +1.8 494,992 + A4249_RS02340 0.39 +1.1 494,992 + A4249_RS02340 0.39 -0.3 494,993 - A4249_RS02340 0.39 +2.4 494,993 - A4249_RS02340 0.39 -0.1 494,993 - A4249_RS02340 0.39 -1.6 494,993 - A4249_RS02340 0.39 -1.7 494,993 - A4249_RS02340 0.39 -0.0 494,993 - A4249_RS02340 0.39 -0.3 494,993 - A4249_RS02340 0.39 -0.7 494,993 - A4249_RS02340 0.39 -0.6 495,162 + A4249_RS02340 0.44 -1.6 495,163 - A4249_RS02340 0.44 -0.0 495,163 - A4249_RS02340 0.44 -0.7 495,220 - A4249_RS02340 0.45 +0.0 495,260 + A4249_RS02340 0.47 +0.9 495,948 - A4249_RS02340 0.68 +1.0 496,079 + A4249_RS02340 0.71 +1.6 496,102 + A4249_RS02340 0.72 -0.7 496,102 + A4249_RS02340 0.72 +0.2 496,102 + A4249_RS02340 0.72 -0.0 496,102 + A4249_RS02340 0.72 -0.5 496,102 + A4249_RS02340 0.72 -1.6 496,103 - A4249_RS02340 0.72 -0.8 496,103 - A4249_RS02340 0.72 +0.9 496,103 - A4249_RS02340 0.72 -0.5 496,223 + A4249_RS02340 0.76 +0.4 496,223 + A4249_RS02340 0.76 +0.6 496,223 + A4249_RS02340 0.76 +0.6 496,223 + A4249_RS02340 0.76 -0.0 496,223 + A4249_RS02340 0.76 +0.3 496,224 - A4249_RS02340 0.76 -0.6 496,224 - A4249_RS02340 0.76 +2.0 496,224 - A4249_RS02340 0.76 -0.0 496,224 - A4249_RS02340 0.76 +1.5 496,224 - A4249_RS02340 0.76 +2.0 496,259 + A4249_RS02340 0.77 -1.4 496,259 + A4249_RS02340 0.77 +0.9 496,260 - A4249_RS02340 0.77 -0.3 496,260 - A4249_RS02340 0.77 +0.5 496,260 - A4249_RS02340 0.77 -0.7 496,353 + A4249_RS02340 0.80 -0.7 496,353 + A4249_RS02340 0.80 +1.6 496,353 + A4249_RS02340 0.80 +1.4 496,354 - A4249_RS02340 0.80 +1.2 496,354 - A4249_RS02340 0.80 -1.2 496,354 - A4249_RS02340 0.80 +1.6 496,354 - A4249_RS02340 0.80 +0.5 496,537 + A4249_RS02340 0.85 -0.6 496,537 + A4249_RS02340 0.85 -0.3 496,537 + A4249_RS02340 0.85 -0.9 496,537 + A4249_RS02340 0.85 +0.0 496,537 + A4249_RS02340 0.85 +0.5 496,537 + A4249_RS02340 0.85 -0.0 496,537 + A4249_RS02340 0.85 -0.3 496,538 - A4249_RS02340 0.85 -1.4 496,538 - A4249_RS02340 0.85 -0.0 496,538 - A4249_RS02340 0.85 -0.2 496,538 - A4249_RS02340 0.85 -1.1 496,539 + A4249_RS02340 0.85 -1.7 496,539 + A4249_RS02340 0.85 +0.3 496,539 + A4249_RS02340 0.85 -0.7 496,539 + A4249_RS02340 0.85 -0.0 496,539 + A4249_RS02340 0.85 +0.2 496,540 - A4249_RS02340 0.85 -0.5 496,540 - A4249_RS02340 0.85 +0.4 496,540 - A4249_RS02340 0.85 -0.0 496,540 - A4249_RS02340 0.85 +0.3 496,540 - A4249_RS02340 0.85 +0.3 496,540 - A4249_RS02340 0.85 +1.1 496,573 + A4249_RS02340 0.86 -2.4 496,573 + A4249_RS02340 0.86 +3.0 496,574 - A4249_RS02340 0.86 -0.5 496,574 - A4249_RS02340 0.86 -0.1 496,612 + A4249_RS02340 0.88 -1.1 496,612 + A4249_RS02340 0.88 -1.0 496,647 + A4249_RS02340 0.89 -0.4 496,647 + A4249_RS02340 0.89 +0.6 496,647 + A4249_RS02340 0.89 +0.5 496,647 + A4249_RS02340 0.89 -1.8 496,647 + A4249_RS02340 0.89 -0.3 496,647 + A4249_RS02340 0.89 -0.8 496,647 + A4249_RS02340 0.89 +0.3 496,647 + A4249_RS02340 0.89 +0.2 496,648 - A4249_RS02340 0.89 +1.3 496,648 - A4249_RS02340 0.89 +1.2 496,648 - A4249_RS02340 0.89 +0.2 496,648 - A4249_RS02340 0.89 -1.9 496,648 - A4249_RS02340 0.89 +0.7 496,648 - A4249_RS02340 0.89 -2.2 496,648 - A4249_RS02340 0.89 -0.4 496,648 - A4249_RS02340 0.89 +0.7 496,648 - A4249_RS02340 0.89 -0.0 496,648 - A4249_RS02340 0.89 -1.6 496,680 + A4249_RS02340 0.90 -0.2 496,680 + A4249_RS02340 0.90 +0.6 496,680 + A4249_RS02340 0.90 +0.3 496,681 - A4249_RS02340 0.90 -0.0 497,209 + +0.3 497,210 - -1.0 497,210 - -2.2 497,210 - +0.4 497,210 - -0.8 497,309 + A4249_RS02345 0.11 -0.4 497,454 + A4249_RS02345 0.22 -2.7 497,455 - A4249_RS02345 0.22 -1.3 497,455 - A4249_RS02345 0.22 +0.0 497,455 - A4249_RS02345 0.22 -0.0 497,455 - A4249_RS02345 0.22 +0.2 497,455 - A4249_RS02345 0.22 -0.5 497,534 - A4249_RS02345 0.28 -0.4 497,599 + A4249_RS02345 0.32 -0.5 497,600 - A4249_RS02345 0.32 -0.2 497,813 + A4249_RS02345 0.48 -0.5 497,898 + A4249_RS02345 0.54 +0.2 497,899 - A4249_RS02345 0.54 -2.6
Or see this region's nucleotide sequence