Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS01065 and A4249_RS01070 are separated by 218 nucleotides A4249_RS01070 and A4249_RS01075 overlap by 4 nucleotides A4249_RS01075 and A4249_RS01080 overlap by 20 nucleotides
A4249_RS01065: A4249_RS01065 - SLC13 family permease, at 205,280 to 207,055
_RS01065
A4249_RS01070: A4249_RS01070 - DoxX family protein, at 207,274 to 207,735
_RS01070
A4249_RS01075: A4249_RS01075 - DNA-binding domain-containing protein, at 207,732 to 208,517
_RS01075
A4249_RS01080: A4249_RS01080 - DUF692 domain-containing protein, at 208,498 to 209,361
_RS01080
Position (kb) 207
208 Strain fitness (log2 ratio) -3
-2
-1
0
1
2
3 at 206.359 kb on + strand, within A4249_RS01065 at 206.359 kb on + strand, within A4249_RS01065 at 206.359 kb on + strand, within A4249_RS01065 at 206.359 kb on + strand, within A4249_RS01065 at 206.359 kb on + strand, within A4249_RS01065 at 206.359 kb on + strand, within A4249_RS01065 at 206.360 kb on - strand, within A4249_RS01065 at 206.360 kb on - strand, within A4249_RS01065 at 206.403 kb on + strand, within A4249_RS01065 at 206.403 kb on + strand, within A4249_RS01065 at 206.403 kb on + strand, within A4249_RS01065 at 206.404 kb on - strand, within A4249_RS01065 at 206.404 kb on - strand, within A4249_RS01065 at 206.404 kb on - strand, within A4249_RS01065 at 206.404 kb on - strand, within A4249_RS01065 at 206.511 kb on - strand, within A4249_RS01065 at 206.526 kb on + strand, within A4249_RS01065 at 206.979 kb on + strand at 206.980 kb on - strand at 207.090 kb on + strand at 207.091 kb on - strand at 207.091 kb on - strand at 207.091 kb on - strand at 207.091 kb on - strand at 207.091 kb on - strand at 207.091 kb on - strand at 207.091 kb on - strand at 207.106 kb on - strand at 207.126 kb on + strand at 207.127 kb on - strand at 207.127 kb on - strand at 207.233 kb on + strand at 207.233 kb on + strand at 207.233 kb on + strand at 207.233 kb on + strand at 207.233 kb on + strand at 207.233 kb on + strand at 207.233 kb on + strand at 207.234 kb on - strand at 207.234 kb on - strand at 207.234 kb on - strand at 207.234 kb on - strand at 207.335 kb on + strand, within A4249_RS01070 at 207.335 kb on + strand, within A4249_RS01070 at 207.335 kb on + strand, within A4249_RS01070 at 207.335 kb on + strand, within A4249_RS01070 at 207.335 kb on + strand, within A4249_RS01070 at 207.335 kb on + strand, within A4249_RS01070 at 207.335 kb on + strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.336 kb on - strand, within A4249_RS01070 at 207.383 kb on + strand, within A4249_RS01070 at 207.384 kb on - strand, within A4249_RS01070 at 207.384 kb on - strand, within A4249_RS01070 at 207.403 kb on + strand, within A4249_RS01070 at 207.403 kb on + strand, within A4249_RS01070 at 207.403 kb on + strand, within A4249_RS01070 at 207.403 kb on + strand, within A4249_RS01070 at 207.403 kb on + strand, within A4249_RS01070 at 207.403 kb on + strand, within A4249_RS01070 at 207.404 kb on - strand, within A4249_RS01070 at 207.404 kb on - strand, within A4249_RS01070 at 207.404 kb on - strand, within A4249_RS01070 at 207.404 kb on - strand, within A4249_RS01070 at 207.404 kb on - strand, within A4249_RS01070 at 207.485 kb on + strand, within A4249_RS01070 at 207.485 kb on + strand, within A4249_RS01070 at 207.485 kb on + strand, within A4249_RS01070 at 207.485 kb on + strand, within A4249_RS01070 at 207.486 kb on - strand, within A4249_RS01070 at 207.533 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.554 kb on + strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.555 kb on - strand, within A4249_RS01070 at 207.628 kb on + strand, within A4249_RS01070 at 207.628 kb on + strand, within A4249_RS01070 at 207.628 kb on + strand, within A4249_RS01070 at 207.629 kb on - strand, within A4249_RS01070 at 207.629 kb on - strand, within A4249_RS01070 at 207.715 kb on + strand at 207.716 kb on - strand at 207.986 kb on + strand, within A4249_RS01075 at 207.986 kb on + strand, within A4249_RS01075 at 208.067 kb on - strand, within A4249_RS01075 at 208.244 kb on - strand, within A4249_RS01075 at 208.244 kb on - strand, within A4249_RS01075 at 208.244 kb on - strand, within A4249_RS01075 at 208.285 kb on + strand, within A4249_RS01075 at 208.285 kb on + strand, within A4249_RS01075 at 208.285 kb on + strand, within A4249_RS01075 at 208.286 kb on - strand, within A4249_RS01075 at 208.286 kb on - strand, within A4249_RS01075 at 208.343 kb on - strand, within A4249_RS01075 at 208.640 kb on + strand, within A4249_RS01080 at 208.640 kb on + strand, within A4249_RS01080 at 208.640 kb on + strand, within A4249_RS01080 at 208.640 kb on + strand, within A4249_RS01080 at 208.641 kb on - strand, within A4249_RS01080 at 208.641 kb on - strand, within A4249_RS01080 at 208.641 kb on - strand, within A4249_RS01080 at 208.641 kb on - strand, within A4249_RS01080 at 208.641 kb on - strand, within A4249_RS01080
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 206,359 + A4249_RS01065 0.61 +0.6 206,359 + A4249_RS01065 0.61 +0.4 206,359 + A4249_RS01065 0.61 -0.2 206,359 + A4249_RS01065 0.61 +1.1 206,359 + A4249_RS01065 0.61 -0.3 206,359 + A4249_RS01065 0.61 -1.0 206,360 - A4249_RS01065 0.61 +0.7 206,360 - A4249_RS01065 0.61 +1.6 206,403 + A4249_RS01065 0.63 -0.1 206,403 + A4249_RS01065 0.63 -1.9 206,403 + A4249_RS01065 0.63 +0.0 206,404 - A4249_RS01065 0.63 +0.5 206,404 - A4249_RS01065 0.63 +0.0 206,404 - A4249_RS01065 0.63 +0.4 206,404 - A4249_RS01065 0.63 +0.5 206,511 - A4249_RS01065 0.69 +0.5 206,526 + A4249_RS01065 0.70 -1.2 206,979 + -0.8 206,980 - +0.5 207,090 + -1.3 207,091 - +0.6 207,091 - +0.1 207,091 - +0.1 207,091 - -0.2 207,091 - -3.1 207,091 - -0.6 207,091 - -0.2 207,106 - -0.1 207,126 + +0.8 207,127 - +1.0 207,127 - +0.1 207,233 + +0.3 207,233 + +0.0 207,233 + +0.0 207,233 + +0.0 207,233 + +0.7 207,233 + -2.6 207,233 + +0.6 207,234 - -0.8 207,234 - -1.2 207,234 - +0.3 207,234 - -1.0 207,335 + A4249_RS01070 0.13 +1.6 207,335 + A4249_RS01070 0.13 +0.4 207,335 + A4249_RS01070 0.13 -0.5 207,335 + A4249_RS01070 0.13 +1.0 207,335 + A4249_RS01070 0.13 -1.1 207,335 + A4249_RS01070 0.13 +1.6 207,335 + A4249_RS01070 0.13 -0.5 207,336 - A4249_RS01070 0.13 +0.0 207,336 - A4249_RS01070 0.13 -0.4 207,336 - A4249_RS01070 0.13 +0.1 207,336 - A4249_RS01070 0.13 -0.7 207,336 - A4249_RS01070 0.13 +3.5 207,336 - A4249_RS01070 0.13 -0.6 207,336 - A4249_RS01070 0.13 -1.0 207,336 - A4249_RS01070 0.13 +0.7 207,383 + A4249_RS01070 0.24 +1.3 207,384 - A4249_RS01070 0.24 -0.3 207,384 - A4249_RS01070 0.24 +0.2 207,403 + A4249_RS01070 0.28 +0.0 207,403 + A4249_RS01070 0.28 -0.1 207,403 + A4249_RS01070 0.28 -0.8 207,403 + A4249_RS01070 0.28 +0.4 207,403 + A4249_RS01070 0.28 -2.8 207,403 + A4249_RS01070 0.28 -1.2 207,404 - A4249_RS01070 0.28 +0.5 207,404 - A4249_RS01070 0.28 +0.3 207,404 - A4249_RS01070 0.28 +0.9 207,404 - A4249_RS01070 0.28 -0.4 207,404 - A4249_RS01070 0.28 -0.2 207,485 + A4249_RS01070 0.46 -1.5 207,485 + A4249_RS01070 0.46 +1.4 207,485 + A4249_RS01070 0.46 -1.3 207,485 + A4249_RS01070 0.46 -0.9 207,486 - A4249_RS01070 0.46 +1.5 207,533 + A4249_RS01070 0.56 -0.1 207,554 + A4249_RS01070 0.61 -1.8 207,554 + A4249_RS01070 0.61 +0.0 207,554 + A4249_RS01070 0.61 -0.6 207,554 + A4249_RS01070 0.61 +0.4 207,554 + A4249_RS01070 0.61 -1.6 207,554 + A4249_RS01070 0.61 -0.1 207,554 + A4249_RS01070 0.61 -0.6 207,554 + A4249_RS01070 0.61 +0.0 207,554 + A4249_RS01070 0.61 -0.7 207,554 + A4249_RS01070 0.61 -0.0 207,554 + A4249_RS01070 0.61 -3.4 207,554 + A4249_RS01070 0.61 +0.3 207,554 + A4249_RS01070 0.61 -1.4 207,554 + A4249_RS01070 0.61 -0.3 207,554 + A4249_RS01070 0.61 -0.8 207,554 + A4249_RS01070 0.61 -0.5 207,554 + A4249_RS01070 0.61 +0.0 207,554 + A4249_RS01070 0.61 +0.5 207,554 + A4249_RS01070 0.61 -0.7 207,554 + A4249_RS01070 0.61 +1.6 207,554 + A4249_RS01070 0.61 +0.4 207,554 + A4249_RS01070 0.61 -0.2 207,554 + A4249_RS01070 0.61 -1.3 207,554 + A4249_RS01070 0.61 +0.1 207,555 - A4249_RS01070 0.61 +0.1 207,555 - A4249_RS01070 0.61 +1.6 207,555 - A4249_RS01070 0.61 -0.6 207,555 - A4249_RS01070 0.61 -0.4 207,555 - A4249_RS01070 0.61 -0.4 207,555 - A4249_RS01070 0.61 +1.4 207,555 - A4249_RS01070 0.61 +1.6 207,555 - A4249_RS01070 0.61 +1.0 207,555 - A4249_RS01070 0.61 -1.0 207,555 - A4249_RS01070 0.61 -1.4 207,555 - A4249_RS01070 0.61 +0.8 207,555 - A4249_RS01070 0.61 -0.1 207,555 - A4249_RS01070 0.61 -0.9 207,555 - A4249_RS01070 0.61 +0.0 207,555 - A4249_RS01070 0.61 +0.0 207,555 - A4249_RS01070 0.61 -0.4 207,555 - A4249_RS01070 0.61 +1.3 207,555 - A4249_RS01070 0.61 +0.3 207,555 - A4249_RS01070 0.61 +0.0 207,555 - A4249_RS01070 0.61 +0.5 207,555 - A4249_RS01070 0.61 -0.3 207,555 - A4249_RS01070 0.61 +1.0 207,555 - A4249_RS01070 0.61 -1.0 207,555 - A4249_RS01070 0.61 +0.2 207,628 + A4249_RS01070 0.77 -0.1 207,628 + A4249_RS01070 0.77 +1.2 207,628 + A4249_RS01070 0.77 -0.3 207,629 - A4249_RS01070 0.77 -1.8 207,629 - A4249_RS01070 0.77 +0.4 207,715 + -0.7 207,716 - +0.4 207,986 + A4249_RS01075 0.32 +0.7 207,986 + A4249_RS01075 0.32 +1.0 208,067 - A4249_RS01075 0.43 +0.0 208,244 - A4249_RS01075 0.65 -0.4 208,244 - A4249_RS01075 0.65 +0.7 208,244 - A4249_RS01075 0.65 +0.6 208,285 + A4249_RS01075 0.70 +0.1 208,285 + A4249_RS01075 0.70 -1.6 208,285 + A4249_RS01075 0.70 +1.1 208,286 - A4249_RS01075 0.70 -1.1 208,286 - A4249_RS01075 0.70 -2.6 208,343 - A4249_RS01075 0.78 +0.7 208,640 + A4249_RS01080 0.16 +0.7 208,640 + A4249_RS01080 0.16 +0.8 208,640 + A4249_RS01080 0.16 -2.1 208,640 + A4249_RS01080 0.16 -0.4 208,641 - A4249_RS01080 0.17 -2.0 208,641 - A4249_RS01080 0.17 +0.0 208,641 - A4249_RS01080 0.17 +0.6 208,641 - A4249_RS01080 0.17 -0.8 208,641 - A4249_RS01080 0.17 +2.0
Or see this region's nucleotide sequence