Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00765 and A4249_RS00770 are separated by 5 nucleotides A4249_RS00770 and A4249_RS00775 overlap by 4 nucleotides A4249_RS00775 and A4249_RS00780 are separated by 197 nucleotides
A4249_RS00765: A4249_RS00765 - formate-dependent phosphoribosylglycinamide formyltransferase, at 145,073 to 146,269
_RS00765
A4249_RS00770: A4249_RS00770 - VOC family protein, at 146,275 to 146,679
_RS00770
A4249_RS00775: A4249_RS00775 - alpha/beta hydrolase-fold protein, at 146,676 to 147,515
_RS00775
A4249_RS00780: A4249_RS00780 - transketolase, at 147,713 to 149,662
_RS00780
Position (kb) 146
147
148 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.731 kb on + strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.732 kb on - strand, within A4249_RS00765 at 145.876 kb on - strand, within A4249_RS00765 at 145.876 kb on - strand, within A4249_RS00765 at 145.888 kb on + strand, within A4249_RS00765 at 145.889 kb on - strand, within A4249_RS00765 at 145.889 kb on - strand, within A4249_RS00765 at 145.889 kb on - strand, within A4249_RS00765 at 146.348 kb on + strand, within A4249_RS00770 at 146.348 kb on + strand, within A4249_RS00770 at 146.348 kb on + strand, within A4249_RS00770 at 146.348 kb on + strand, within A4249_RS00770 at 146.348 kb on + strand, within A4249_RS00770 at 146.348 kb on + strand, within A4249_RS00770 at 146.349 kb on - strand, within A4249_RS00770 at 146.349 kb on - strand, within A4249_RS00770 at 146.349 kb on - strand, within A4249_RS00770 at 146.349 kb on - strand, within A4249_RS00770 at 146.349 kb on - strand, within A4249_RS00770 at 146.349 kb on - strand, within A4249_RS00770 at 146.349 kb on - strand, within A4249_RS00770 at 146.414 kb on - strand, within A4249_RS00770 at 146.553 kb on + strand, within A4249_RS00770 at 146.554 kb on - strand, within A4249_RS00770 at 146.554 kb on - strand, within A4249_RS00770 at 146.554 kb on - strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.606 kb on + strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.607 kb on - strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.627 kb on + strand, within A4249_RS00770 at 146.628 kb on - strand, within A4249_RS00770 at 146.628 kb on - strand, within A4249_RS00770 at 146.628 kb on - strand, within A4249_RS00770 at 146.628 kb on - strand, within A4249_RS00770 at 146.628 kb on - strand, within A4249_RS00770 at 146.628 kb on - strand, within A4249_RS00770 at 146.628 kb on - strand, within A4249_RS00770 at 146.695 kb on + strand at 146.695 kb on + strand at 146.731 kb on + strand at 146.731 kb on + strand at 146.731 kb on + strand at 146.731 kb on + strand at 146.731 kb on + strand at 146.732 kb on - strand at 146.732 kb on - strand at 146.794 kb on + strand, within A4249_RS00775 at 146.794 kb on + strand, within A4249_RS00775 at 146.795 kb on - strand, within A4249_RS00775 at 146.795 kb on - strand, within A4249_RS00775 at 146.795 kb on - strand, within A4249_RS00775 at 146.795 kb on - strand, within A4249_RS00775 at 146.795 kb on - strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.965 kb on + strand, within A4249_RS00775 at 146.966 kb on - strand, within A4249_RS00775 at 146.966 kb on - strand, within A4249_RS00775 at 146.966 kb on - strand, within A4249_RS00775 at 146.966 kb on - strand, within A4249_RS00775 at 147.075 kb on - strand, within A4249_RS00775 at 147.300 kb on + strand, within A4249_RS00775 at 147.300 kb on + strand, within A4249_RS00775 at 147.300 kb on + strand, within A4249_RS00775 at 147.300 kb on + strand, within A4249_RS00775 at 147.301 kb on - strand, within A4249_RS00775 at 147.301 kb on - strand, within A4249_RS00775 at 147.301 kb on - strand, within A4249_RS00775 at 147.304 kb on + strand, within A4249_RS00775 at 147.304 kb on + strand, within A4249_RS00775 at 147.304 kb on + strand, within A4249_RS00775 at 147.304 kb on + strand, within A4249_RS00775 at 147.304 kb on + strand, within A4249_RS00775 at 147.304 kb on + strand, within A4249_RS00775 at 147.304 kb on + strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.305 kb on - strand, within A4249_RS00775 at 147.316 kb on + strand, within A4249_RS00775 at 147.316 kb on + strand, within A4249_RS00775 at 147.316 kb on + strand, within A4249_RS00775 at 147.317 kb on - strand, within A4249_RS00775 at 147.337 kb on + strand, within A4249_RS00775 at 147.337 kb on + strand, within A4249_RS00775 at 147.337 kb on + strand, within A4249_RS00775 at 147.338 kb on - strand, within A4249_RS00775 at 147.338 kb on - strand, within A4249_RS00775 at 147.400 kb on + strand, within A4249_RS00775 at 147.401 kb on - strand, within A4249_RS00775 at 147.401 kb on - strand, within A4249_RS00775 at 147.432 kb on + strand at 147.614 kb on + strand at 147.614 kb on + strand at 147.614 kb on + strand at 147.615 kb on - strand at 147.616 kb on + strand at 147.616 kb on + strand at 147.616 kb on + strand at 147.616 kb on + strand at 147.616 kb on + strand at 147.616 kb on + strand at 147.616 kb on + strand at 147.616 kb on + strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.617 kb on - strand at 147.635 kb on + strand at 147.635 kb on + strand at 147.635 kb on + strand at 147.635 kb on + strand at 147.635 kb on + strand at 147.635 kb on + strand at 147.636 kb on - strand at 147.636 kb on - strand at 147.636 kb on - strand at 147.636 kb on - strand at 147.636 kb on - strand at 147.636 kb on - strand at 147.636 kb on - strand at 147.714 kb on + strand at 147.714 kb on + strand at 147.714 kb on + strand at 147.714 kb on + strand at 147.715 kb on - strand at 147.715 kb on - strand at 147.715 kb on - strand at 147.715 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 145,731 + A4249_RS00765 0.55 -0.2 145,731 + A4249_RS00765 0.55 -0.5 145,731 + A4249_RS00765 0.55 +1.0 145,731 + A4249_RS00765 0.55 -0.1 145,731 + A4249_RS00765 0.55 +0.7 145,731 + A4249_RS00765 0.55 +0.8 145,731 + A4249_RS00765 0.55 -0.4 145,731 + A4249_RS00765 0.55 +0.1 145,731 + A4249_RS00765 0.55 +1.7 145,731 + A4249_RS00765 0.55 -0.1 145,731 + A4249_RS00765 0.55 +1.1 145,731 + A4249_RS00765 0.55 +0.1 145,732 - A4249_RS00765 0.55 +0.2 145,732 - A4249_RS00765 0.55 +0.0 145,732 - A4249_RS00765 0.55 -0.4 145,732 - A4249_RS00765 0.55 +0.6 145,732 - A4249_RS00765 0.55 +1.2 145,876 - A4249_RS00765 0.67 -4.1 145,876 - A4249_RS00765 0.67 +1.3 145,888 + A4249_RS00765 0.68 -1.0 145,889 - A4249_RS00765 0.68 +1.0 145,889 - A4249_RS00765 0.68 +1.1 145,889 - A4249_RS00765 0.68 +2.0 146,348 + A4249_RS00770 0.18 +1.6 146,348 + A4249_RS00770 0.18 -0.4 146,348 + A4249_RS00770 0.18 +1.4 146,348 + A4249_RS00770 0.18 +1.4 146,348 + A4249_RS00770 0.18 +0.1 146,348 + A4249_RS00770 0.18 -0.6 146,349 - A4249_RS00770 0.18 -0.3 146,349 - A4249_RS00770 0.18 +1.4 146,349 - A4249_RS00770 0.18 -0.0 146,349 - A4249_RS00770 0.18 +0.3 146,349 - A4249_RS00770 0.18 -1.0 146,349 - A4249_RS00770 0.18 -0.5 146,349 - A4249_RS00770 0.18 -1.1 146,414 - A4249_RS00770 0.34 +0.9 146,553 + A4249_RS00770 0.69 -1.5 146,554 - A4249_RS00770 0.69 +0.8 146,554 - A4249_RS00770 0.69 +0.7 146,554 - A4249_RS00770 0.69 +0.2 146,606 + A4249_RS00770 0.82 -0.3 146,606 + A4249_RS00770 0.82 -0.3 146,606 + A4249_RS00770 0.82 +1.4 146,606 + A4249_RS00770 0.82 -0.2 146,606 + A4249_RS00770 0.82 +0.3 146,606 + A4249_RS00770 0.82 -0.6 146,606 + A4249_RS00770 0.82 -0.2 146,606 + A4249_RS00770 0.82 +0.6 146,606 + A4249_RS00770 0.82 -0.4 146,606 + A4249_RS00770 0.82 -1.0 146,606 + A4249_RS00770 0.82 +1.2 146,607 - A4249_RS00770 0.82 -2.0 146,607 - A4249_RS00770 0.82 +0.3 146,607 - A4249_RS00770 0.82 +0.0 146,607 - A4249_RS00770 0.82 -0.1 146,607 - A4249_RS00770 0.82 -0.5 146,607 - A4249_RS00770 0.82 +0.6 146,607 - A4249_RS00770 0.82 -1.0 146,607 - A4249_RS00770 0.82 +0.0 146,607 - A4249_RS00770 0.82 +0.9 146,607 - A4249_RS00770 0.82 -1.3 146,607 - A4249_RS00770 0.82 -0.8 146,607 - A4249_RS00770 0.82 +2.6 146,627 + A4249_RS00770 0.87 -0.8 146,627 + A4249_RS00770 0.87 -0.1 146,627 + A4249_RS00770 0.87 -1.0 146,627 + A4249_RS00770 0.87 -0.5 146,627 + A4249_RS00770 0.87 -0.4 146,627 + A4249_RS00770 0.87 -1.4 146,627 + A4249_RS00770 0.87 +1.0 146,627 + A4249_RS00770 0.87 -0.5 146,628 - A4249_RS00770 0.87 +0.3 146,628 - A4249_RS00770 0.87 +0.2 146,628 - A4249_RS00770 0.87 +0.3 146,628 - A4249_RS00770 0.87 -0.3 146,628 - A4249_RS00770 0.87 -0.4 146,628 - A4249_RS00770 0.87 -1.0 146,628 - A4249_RS00770 0.87 +0.5 146,695 + -0.0 146,695 + +0.0 146,731 + -1.0 146,731 + -0.3 146,731 + +0.3 146,731 + +0.3 146,731 + -1.5 146,732 - +0.7 146,732 - +3.0 146,794 + A4249_RS00775 0.14 +0.2 146,794 + A4249_RS00775 0.14 +0.0 146,795 - A4249_RS00775 0.14 +0.5 146,795 - A4249_RS00775 0.14 -0.8 146,795 - A4249_RS00775 0.14 -0.2 146,795 - A4249_RS00775 0.14 +1.6 146,795 - A4249_RS00775 0.14 +0.0 146,965 + A4249_RS00775 0.34 +0.6 146,965 + A4249_RS00775 0.34 +2.0 146,965 + A4249_RS00775 0.34 +0.0 146,965 + A4249_RS00775 0.34 -0.8 146,965 + A4249_RS00775 0.34 -2.3 146,965 + A4249_RS00775 0.34 +1.6 146,965 + A4249_RS00775 0.34 -0.3 146,965 + A4249_RS00775 0.34 -0.3 146,965 + A4249_RS00775 0.34 -0.3 146,965 + A4249_RS00775 0.34 +0.4 146,966 - A4249_RS00775 0.35 -0.2 146,966 - A4249_RS00775 0.35 -0.5 146,966 - A4249_RS00775 0.35 +1.4 146,966 - A4249_RS00775 0.35 +0.1 147,075 - A4249_RS00775 0.47 -1.4 147,300 + A4249_RS00775 0.74 -0.1 147,300 + A4249_RS00775 0.74 -0.2 147,300 + A4249_RS00775 0.74 -0.7 147,300 + A4249_RS00775 0.74 -1.0 147,301 - A4249_RS00775 0.74 -0.2 147,301 - A4249_RS00775 0.74 +1.3 147,301 - A4249_RS00775 0.74 +0.3 147,304 + A4249_RS00775 0.75 +0.7 147,304 + A4249_RS00775 0.75 -0.3 147,304 + A4249_RS00775 0.75 +0.8 147,304 + A4249_RS00775 0.75 -0.1 147,304 + A4249_RS00775 0.75 +0.2 147,304 + A4249_RS00775 0.75 -0.6 147,304 + A4249_RS00775 0.75 -0.1 147,305 - A4249_RS00775 0.75 +0.5 147,305 - A4249_RS00775 0.75 -1.9 147,305 - A4249_RS00775 0.75 -1.0 147,305 - A4249_RS00775 0.75 -1.5 147,305 - A4249_RS00775 0.75 -0.4 147,305 - A4249_RS00775 0.75 -0.1 147,305 - A4249_RS00775 0.75 +0.6 147,305 - A4249_RS00775 0.75 -1.0 147,305 - A4249_RS00775 0.75 +0.4 147,305 - A4249_RS00775 0.75 -1.0 147,305 - A4249_RS00775 0.75 -0.3 147,305 - A4249_RS00775 0.75 -0.2 147,305 - A4249_RS00775 0.75 +0.3 147,316 + A4249_RS00775 0.76 -1.4 147,316 + A4249_RS00775 0.76 +1.2 147,316 + A4249_RS00775 0.76 +1.4 147,317 - A4249_RS00775 0.76 -0.8 147,337 + A4249_RS00775 0.79 -1.0 147,337 + A4249_RS00775 0.79 -0.9 147,337 + A4249_RS00775 0.79 +1.5 147,338 - A4249_RS00775 0.79 +0.0 147,338 - A4249_RS00775 0.79 -0.3 147,400 + A4249_RS00775 0.86 -1.0 147,401 - A4249_RS00775 0.86 -1.8 147,401 - A4249_RS00775 0.86 +0.0 147,432 + +0.5 147,614 + -2.0 147,614 + +0.1 147,614 + -1.0 147,615 - -0.5 147,616 + -0.1 147,616 + -0.3 147,616 + -0.0 147,616 + +1.0 147,616 + +1.6 147,616 + +0.6 147,616 + -1.9 147,616 + +1.9 147,617 - +0.6 147,617 - -0.7 147,617 - +0.6 147,617 - +0.9 147,617 - -0.4 147,617 - +1.3 147,617 - +1.5 147,617 - +0.0 147,617 - +0.0 147,617 - -0.4 147,617 - -1.4 147,635 + -0.1 147,635 + +1.2 147,635 + +0.7 147,635 + -0.3 147,635 + -1.8 147,635 + -2.0 147,636 - +0.1 147,636 - +0.9 147,636 - +0.2 147,636 - -1.2 147,636 - -1.3 147,636 - +0.1 147,636 - -0.4 147,714 + -0.1 147,714 + -0.3 147,714 + -0.3 147,714 + +0.0 147,715 - -1.5 147,715 - -0.6 147,715 - -0.7 147,715 - -1.1
Or see this region's nucleotide sequence