Experiment: Tween 20 (C), 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS00150 and A4249_RS00155 are separated by 64 nucleotides A4249_RS00155 and A4249_RS00160 are separated by 36 nucleotides
A4249_RS00150: A4249_RS00150 - pitrilysin family protein, at 24,967 to 26,181
_RS00150
A4249_RS00155: A4249_RS00155 - NAD(P)H-dependent oxidoreductase, at 26,246 to 26,800
_RS00155
A4249_RS00160: A4249_RS00160 - NADP-dependent oxidoreductase, at 26,837 to 27,841
_RS00160
Position (kb) 26
27 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1
2
3 at 25.451 kb on - strand, within A4249_RS00150 at 25.451 kb on - strand, within A4249_RS00150 at 25.451 kb on - strand, within A4249_RS00150 at 25.756 kb on + strand, within A4249_RS00150 at 25.756 kb on + strand, within A4249_RS00150 at 25.771 kb on + strand, within A4249_RS00150 at 25.783 kb on + strand, within A4249_RS00150 at 25.783 kb on + strand, within A4249_RS00150 at 25.783 kb on + strand, within A4249_RS00150 at 25.783 kb on + strand, within A4249_RS00150 at 25.784 kb on - strand, within A4249_RS00150 at 25.784 kb on - strand, within A4249_RS00150 at 25.784 kb on - strand, within A4249_RS00150 at 25.784 kb on - strand, within A4249_RS00150 at 25.784 kb on - strand, within A4249_RS00150 at 25.784 kb on - strand, within A4249_RS00150 at 25.800 kb on - strand, within A4249_RS00150 at 25.800 kb on - strand, within A4249_RS00150 at 25.800 kb on - strand, within A4249_RS00150 at 25.810 kb on + strand, within A4249_RS00150 at 25.810 kb on + strand, within A4249_RS00150 at 25.926 kb on + strand, within A4249_RS00150 at 25.927 kb on - strand, within A4249_RS00150 at 25.927 kb on - strand, within A4249_RS00150 at 26.088 kb on - strand at 26.208 kb on + strand at 26.294 kb on + strand at 26.381 kb on + strand, within A4249_RS00155 at 26.381 kb on + strand, within A4249_RS00155 at 26.480 kb on + strand, within A4249_RS00155 at 26.480 kb on + strand, within A4249_RS00155 at 26.480 kb on + strand, within A4249_RS00155 at 26.537 kb on + strand, within A4249_RS00155 at 26.537 kb on + strand, within A4249_RS00155 at 26.678 kb on + strand, within A4249_RS00155 at 26.678 kb on + strand, within A4249_RS00155 at 26.678 kb on + strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.679 kb on - strand, within A4249_RS00155 at 26.680 kb on + strand, within A4249_RS00155 at 26.680 kb on + strand, within A4249_RS00155 at 26.838 kb on + strand at 26.839 kb on - strand at 26.889 kb on + strand at 26.889 kb on + strand at 26.889 kb on + strand at 26.890 kb on - strand at 26.890 kb on - strand at 26.890 kb on - strand at 27.018 kb on + strand, within A4249_RS00160 at 27.018 kb on + strand, within A4249_RS00160 at 27.018 kb on + strand, within A4249_RS00160 at 27.018 kb on + strand, within A4249_RS00160 at 27.018 kb on + strand, within A4249_RS00160 at 27.018 kb on + strand, within A4249_RS00160 at 27.018 kb on + strand, within A4249_RS00160 at 27.019 kb on - strand, within A4249_RS00160 at 27.019 kb on - strand, within A4249_RS00160 at 27.019 kb on - strand, within A4249_RS00160 at 27.019 kb on - strand, within A4249_RS00160 at 27.019 kb on - strand, within A4249_RS00160 at 27.019 kb on - strand, within A4249_RS00160 at 27.222 kb on + strand, within A4249_RS00160 at 27.222 kb on + strand, within A4249_RS00160 at 27.223 kb on - strand, within A4249_RS00160 at 27.258 kb on + strand, within A4249_RS00160 at 27.258 kb on + strand, within A4249_RS00160 at 27.259 kb on - strand, within A4249_RS00160 at 27.259 kb on - strand, within A4249_RS00160 at 27.259 kb on - strand, within A4249_RS00160 at 27.259 kb on - strand, within A4249_RS00160 at 27.535 kb on + strand, within A4249_RS00160 at 27.536 kb on - strand, within A4249_RS00160 at 27.536 kb on - strand, within A4249_RS00160 at 27.536 kb on - strand, within A4249_RS00160 at 27.536 kb on - strand, within A4249_RS00160 at 27.536 kb on - strand, within A4249_RS00160 at 27.537 kb on + strand, within A4249_RS00160 at 27.537 kb on + strand, within A4249_RS00160 at 27.537 kb on + strand, within A4249_RS00160 at 27.537 kb on + strand, within A4249_RS00160 at 27.537 kb on + strand, within A4249_RS00160 at 27.537 kb on + strand, within A4249_RS00160 at 27.538 kb on - strand, within A4249_RS00160 at 27.538 kb on - strand, within A4249_RS00160 at 27.538 kb on - strand, within A4249_RS00160 at 27.538 kb on - strand, within A4249_RS00160 at 27.538 kb on - strand, within A4249_RS00160 at 27.538 kb on - strand, within A4249_RS00160 at 27.579 kb on + strand, within A4249_RS00160 at 27.579 kb on + strand, within A4249_RS00160 at 27.579 kb on + strand, within A4249_RS00160 at 27.579 kb on + strand, within A4249_RS00160 at 27.580 kb on - strand, within A4249_RS00160 at 27.580 kb on - strand, within A4249_RS00160 at 27.580 kb on - strand, within A4249_RS00160 at 27.580 kb on - strand, within A4249_RS00160 at 27.580 kb on - strand, within A4249_RS00160 at 27.580 kb on - strand, within A4249_RS00160 at 27.580 kb on - strand, within A4249_RS00160 at 27.672 kb on + strand, within A4249_RS00160 at 27.672 kb on + strand, within A4249_RS00160 at 27.673 kb on - strand, within A4249_RS00160 at 27.673 kb on - strand, within A4249_RS00160 at 27.673 kb on - strand, within A4249_RS00160
Per-strain Table
Position Strand Gene LocusTag Fraction Tween 20 (C), 20C remove 25,451 - A4249_RS00150 0.40 -0.7 25,451 - A4249_RS00150 0.40 +1.6 25,451 - A4249_RS00150 0.40 +0.0 25,756 + A4249_RS00150 0.65 -1.0 25,756 + A4249_RS00150 0.65 +0.6 25,771 + A4249_RS00150 0.66 -2.3 25,783 + A4249_RS00150 0.67 -0.4 25,783 + A4249_RS00150 0.67 -1.5 25,783 + A4249_RS00150 0.67 -0.3 25,783 + A4249_RS00150 0.67 -1.1 25,784 - A4249_RS00150 0.67 +1.5 25,784 - A4249_RS00150 0.67 +0.0 25,784 - A4249_RS00150 0.67 -0.6 25,784 - A4249_RS00150 0.67 -0.6 25,784 - A4249_RS00150 0.67 -0.3 25,784 - A4249_RS00150 0.67 +0.4 25,800 - A4249_RS00150 0.69 -0.3 25,800 - A4249_RS00150 0.69 +1.3 25,800 - A4249_RS00150 0.69 -0.7 25,810 + A4249_RS00150 0.69 -0.9 25,810 + A4249_RS00150 0.69 -0.7 25,926 + A4249_RS00150 0.79 +0.9 25,927 - A4249_RS00150 0.79 -0.3 25,927 - A4249_RS00150 0.79 -1.0 26,088 - -0.2 26,208 + +0.4 26,294 + +0.4 26,381 + A4249_RS00155 0.24 +0.4 26,381 + A4249_RS00155 0.24 -2.0 26,480 + A4249_RS00155 0.42 -0.7 26,480 + A4249_RS00155 0.42 -0.3 26,480 + A4249_RS00155 0.42 -0.4 26,537 + A4249_RS00155 0.52 +0.2 26,537 + A4249_RS00155 0.52 -0.4 26,678 + A4249_RS00155 0.78 +3.0 26,678 + A4249_RS00155 0.78 +0.1 26,678 + A4249_RS00155 0.78 -0.1 26,679 - A4249_RS00155 0.78 -1.4 26,679 - A4249_RS00155 0.78 -1.0 26,679 - A4249_RS00155 0.78 -0.1 26,679 - A4249_RS00155 0.78 -0.4 26,679 - A4249_RS00155 0.78 +0.8 26,679 - A4249_RS00155 0.78 +0.0 26,679 - A4249_RS00155 0.78 +0.0 26,679 - A4249_RS00155 0.78 +0.4 26,679 - A4249_RS00155 0.78 +1.1 26,679 - A4249_RS00155 0.78 -0.4 26,679 - A4249_RS00155 0.78 -0.5 26,679 - A4249_RS00155 0.78 +1.0 26,679 - A4249_RS00155 0.78 -1.0 26,680 + A4249_RS00155 0.78 +0.3 26,680 + A4249_RS00155 0.78 +0.1 26,838 + +0.3 26,839 - -0.3 26,889 + -0.6 26,889 + +0.6 26,889 + -0.4 26,890 - +0.2 26,890 - +2.0 26,890 - +0.0 27,018 + A4249_RS00160 0.18 -0.6 27,018 + A4249_RS00160 0.18 -1.5 27,018 + A4249_RS00160 0.18 +0.8 27,018 + A4249_RS00160 0.18 -3.8 27,018 + A4249_RS00160 0.18 +1.9 27,018 + A4249_RS00160 0.18 -1.5 27,018 + A4249_RS00160 0.18 -0.1 27,019 - A4249_RS00160 0.18 -1.0 27,019 - A4249_RS00160 0.18 +0.2 27,019 - A4249_RS00160 0.18 -0.4 27,019 - A4249_RS00160 0.18 -2.3 27,019 - A4249_RS00160 0.18 -0.4 27,019 - A4249_RS00160 0.18 -0.7 27,222 + A4249_RS00160 0.38 +0.0 27,222 + A4249_RS00160 0.38 +0.2 27,223 - A4249_RS00160 0.38 +2.6 27,258 + A4249_RS00160 0.42 -1.5 27,258 + A4249_RS00160 0.42 -0.5 27,259 - A4249_RS00160 0.42 -1.5 27,259 - A4249_RS00160 0.42 -0.3 27,259 - A4249_RS00160 0.42 -0.8 27,259 - A4249_RS00160 0.42 -1.0 27,535 + A4249_RS00160 0.69 -0.2 27,536 - A4249_RS00160 0.70 -0.3 27,536 - A4249_RS00160 0.70 +0.4 27,536 - A4249_RS00160 0.70 +0.4 27,536 - A4249_RS00160 0.70 -1.1 27,536 - A4249_RS00160 0.70 -1.0 27,537 + A4249_RS00160 0.70 -0.1 27,537 + A4249_RS00160 0.70 +1.5 27,537 + A4249_RS00160 0.70 -0.5 27,537 + A4249_RS00160 0.70 +1.7 27,537 + A4249_RS00160 0.70 -1.8 27,537 + A4249_RS00160 0.70 -0.7 27,538 - A4249_RS00160 0.70 +0.7 27,538 - A4249_RS00160 0.70 +0.5 27,538 - A4249_RS00160 0.70 -0.3 27,538 - A4249_RS00160 0.70 +1.0 27,538 - A4249_RS00160 0.70 +0.4 27,538 - A4249_RS00160 0.70 -0.1 27,579 + A4249_RS00160 0.74 -0.2 27,579 + A4249_RS00160 0.74 -0.3 27,579 + A4249_RS00160 0.74 +2.0 27,579 + A4249_RS00160 0.74 +2.4 27,580 - A4249_RS00160 0.74 -0.2 27,580 - A4249_RS00160 0.74 -0.0 27,580 - A4249_RS00160 0.74 -2.8 27,580 - A4249_RS00160 0.74 -0.6 27,580 - A4249_RS00160 0.74 -1.2 27,580 - A4249_RS00160 0.74 +0.6 27,580 - A4249_RS00160 0.74 +0.0 27,672 + A4249_RS00160 0.83 -1.4 27,672 + A4249_RS00160 0.83 +1.9 27,673 - A4249_RS00160 0.83 -3.4 27,673 - A4249_RS00160 0.83 +1.4 27,673 - A4249_RS00160 0.83 +0.0
Or see this region's nucleotide sequence