Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS16045 and A4249_RS16050 are separated by 224 nucleotides A4249_RS16050 and A4249_RS16055 are separated by 146 nucleotides A4249_RS16055 and A4249_RS16060 are separated by 7 nucleotides A4249_RS16060 and A4249_RS16065 are separated by 2 nucleotides
A4249_RS16045: A4249_RS16045 - WecB/TagA/CpsF family glycosyltransferase, at 3,233,169 to 3,234,029
_RS16045
A4249_RS16050: A4249_RS16050 - tRNA-Leu, at 3,234,254 to 3,234,340
_RS16050
A4249_RS16055: A4249_RS16055 - ribonuclease D, at 3,234,487 to 3,235,101
_RS16055
A4249_RS16060: A4249_RS16060 - LPS export ABC transporter periplasmic protein LptC, at 3,235,109 to 3,235,768
_RS16060
A4249_RS16065: A4249_RS16065 - LptA/OstA family protein, at 3,235,771 to 3,236,259
_RS16065
Position (kb)
3234
3235
3236 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1
2 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.671 kb on + strand, within A4249_RS16045 at 3233.672 kb on - strand, within A4249_RS16045 at 3233.672 kb on - strand, within A4249_RS16045 at 3233.672 kb on - strand, within A4249_RS16045 at 3233.672 kb on - strand, within A4249_RS16045 at 3233.767 kb on + strand, within A4249_RS16045 at 3233.767 kb on + strand, within A4249_RS16045 at 3233.768 kb on - strand, within A4249_RS16045 at 3233.803 kb on + strand, within A4249_RS16045 at 3233.803 kb on + strand, within A4249_RS16045 at 3233.803 kb on + strand, within A4249_RS16045 at 3233.803 kb on + strand, within A4249_RS16045 at 3233.804 kb on - strand, within A4249_RS16045 at 3233.804 kb on - strand, within A4249_RS16045 at 3233.804 kb on - strand, within A4249_RS16045 at 3233.804 kb on - strand, within A4249_RS16045 at 3234.041 kb on - strand at 3234.066 kb on + strand at 3234.079 kb on + strand at 3234.079 kb on + strand at 3234.080 kb on - strand at 3234.089 kb on + strand at 3234.089 kb on + strand at 3234.089 kb on + strand at 3234.089 kb on + strand at 3234.474 kb on + strand at 3234.474 kb on + strand at 3234.474 kb on + strand at 3234.474 kb on + strand at 3234.474 kb on + strand at 3234.475 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 3,233,671 + A4249_RS16045 0.58 -1.4 3,233,671 + A4249_RS16045 0.58 +0.6 3,233,671 + A4249_RS16045 0.58 +2.3 3,233,671 + A4249_RS16045 0.58 -0.6 3,233,671 + A4249_RS16045 0.58 -0.1 3,233,671 + A4249_RS16045 0.58 +0.5 3,233,671 + A4249_RS16045 0.58 -2.2 3,233,671 + A4249_RS16045 0.58 -2.0 3,233,672 - A4249_RS16045 0.58 -0.7 3,233,672 - A4249_RS16045 0.58 +0.5 3,233,672 - A4249_RS16045 0.58 -0.6 3,233,672 - A4249_RS16045 0.58 +0.3 3,233,767 + A4249_RS16045 0.69 -0.1 3,233,767 + A4249_RS16045 0.69 +0.3 3,233,768 - A4249_RS16045 0.70 -0.9 3,233,803 + A4249_RS16045 0.74 -0.1 3,233,803 + A4249_RS16045 0.74 +0.9 3,233,803 + A4249_RS16045 0.74 +1.5 3,233,803 + A4249_RS16045 0.74 -0.2 3,233,804 - A4249_RS16045 0.74 -2.2 3,233,804 - A4249_RS16045 0.74 +0.3 3,233,804 - A4249_RS16045 0.74 -1.5 3,233,804 - A4249_RS16045 0.74 +0.3 3,234,041 - -2.1 3,234,066 + -0.7 3,234,079 + -0.1 3,234,079 + -3.8 3,234,080 - -0.5 3,234,089 + -0.5 3,234,089 + -0.3 3,234,089 + -2.2 3,234,089 + -1.7 3,234,474 + -1.4 3,234,474 + +1.3 3,234,474 + +1.9 3,234,474 + -0.7 3,234,474 + -0.2 3,234,475 - -1.2
Or see this region's nucleotide sequence