Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS15465 and A4249_RS15470 are separated by 196 nucleotides A4249_RS15470 and A4249_RS15475 are separated by 84 nucleotides A4249_RS15475 and A4249_RS15480 are separated by 57 nucleotides
A4249_RS15465: A4249_RS15465 - extensin family protein, at 3,131,609 to 3,132,370
_RS15465
A4249_RS15470: A4249_RS15470 - cold-shock protein, at 3,132,567 to 3,132,770
_RS15470
A4249_RS15475: A4249_RS15475 - DMT family transporter, at 3,132,855 to 3,133,784
_RS15475
A4249_RS15480: A4249_RS15480 - histidine kinase dimerization/phosphoacceptor domain -containing protein, at 3,133,842 to 3,136,016
_RS15480
Position (kb)
3132
3133
3134 Strain fitness (log2 ratio)
-2
-1
0
1
2
3
4 at 3131.993 kb on + strand, within A4249_RS15465 at 3131.994 kb on - strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.071 kb on + strand, within A4249_RS15465 at 3132.072 kb on - strand, within A4249_RS15465 at 3132.072 kb on - strand, within A4249_RS15465 at 3132.072 kb on - strand, within A4249_RS15465 at 3132.072 kb on - strand, within A4249_RS15465 at 3132.072 kb on - strand, within A4249_RS15465 at 3132.072 kb on - strand, within A4249_RS15465 at 3132.072 kb on - strand, within A4249_RS15465 at 3132.080 kb on + strand, within A4249_RS15465 at 3132.080 kb on + strand, within A4249_RS15465 at 3132.080 kb on + strand, within A4249_RS15465 at 3132.080 kb on + strand, within A4249_RS15465 at 3132.080 kb on + strand, within A4249_RS15465 at 3132.080 kb on + strand, within A4249_RS15465 at 3132.080 kb on + strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.081 kb on - strand, within A4249_RS15465 at 3132.098 kb on + strand, within A4249_RS15465 at 3132.098 kb on + strand, within A4249_RS15465 at 3132.099 kb on - strand, within A4249_RS15465 at 3132.099 kb on - strand, within A4249_RS15465 at 3132.099 kb on - strand, within A4249_RS15465 at 3132.099 kb on - strand, within A4249_RS15465 at 3132.308 kb on + strand at 3132.308 kb on + strand at 3132.308 kb on + strand at 3132.308 kb on + strand at 3132.309 kb on - strand at 3132.309 kb on - strand at 3132.309 kb on - strand at 3132.309 kb on - strand at 3132.609 kb on + strand, within A4249_RS15470 at 3132.610 kb on - strand, within A4249_RS15470 at 3132.714 kb on + strand, within A4249_RS15470 at 3132.715 kb on - strand, within A4249_RS15470 at 3132.768 kb on + strand at 3132.768 kb on + strand at 3132.768 kb on + strand at 3132.769 kb on - strand at 3132.793 kb on - strand at 3132.793 kb on - strand at 3132.856 kb on + strand at 3132.856 kb on + strand at 3132.856 kb on + strand at 3132.857 kb on - strand at 3132.857 kb on - strand at 3132.933 kb on + strand at 3132.948 kb on + strand, within A4249_RS15475 at 3132.948 kb on + strand, within A4249_RS15475 at 3132.948 kb on + strand, within A4249_RS15475 at 3132.948 kb on + strand, within A4249_RS15475 at 3132.948 kb on + strand, within A4249_RS15475 at 3132.949 kb on - strand, within A4249_RS15475 at 3132.949 kb on - strand, within A4249_RS15475 at 3132.949 kb on - strand, within A4249_RS15475 at 3132.949 kb on - strand, within A4249_RS15475 at 3133.269 kb on + strand, within A4249_RS15475 at 3133.283 kb on - strand, within A4249_RS15475 at 3133.291 kb on + strand, within A4249_RS15475 at 3133.291 kb on + strand, within A4249_RS15475 at 3133.292 kb on - strand, within A4249_RS15475 at 3133.292 kb on - strand, within A4249_RS15475 at 3133.292 kb on - strand, within A4249_RS15475 at 3133.522 kb on + strand, within A4249_RS15475 at 3133.522 kb on + strand, within A4249_RS15475 at 3133.522 kb on + strand, within A4249_RS15475 at 3133.522 kb on + strand, within A4249_RS15475 at 3133.523 kb on - strand, within A4249_RS15475 at 3133.796 kb on + strand at 3133.796 kb on + strand at 3134.066 kb on - strand, within A4249_RS15480 at 3134.066 kb on - strand, within A4249_RS15480 at 3134.071 kb on + strand, within A4249_RS15480 at 3134.071 kb on + strand, within A4249_RS15480 at 3134.071 kb on + strand, within A4249_RS15480 at 3134.071 kb on + strand, within A4249_RS15480 at 3134.071 kb on + strand, within A4249_RS15480 at 3134.072 kb on - strand, within A4249_RS15480 at 3134.072 kb on - strand, within A4249_RS15480 at 3134.072 kb on - strand, within A4249_RS15480 at 3134.072 kb on - strand, within A4249_RS15480 at 3134.072 kb on - strand, within A4249_RS15480 at 3134.224 kb on + strand, within A4249_RS15480 at 3134.224 kb on + strand, within A4249_RS15480 at 3134.224 kb on + strand, within A4249_RS15480 at 3134.225 kb on - strand, within A4249_RS15480 at 3134.225 kb on - strand, within A4249_RS15480 at 3134.225 kb on - strand, within A4249_RS15480 at 3134.263 kb on + strand, within A4249_RS15480 at 3134.263 kb on + strand, within A4249_RS15480 at 3134.264 kb on - strand, within A4249_RS15480 at 3134.425 kb on + strand, within A4249_RS15480 at 3134.425 kb on + strand, within A4249_RS15480 at 3134.425 kb on + strand, within A4249_RS15480 at 3134.425 kb on + strand, within A4249_RS15480 at 3134.425 kb on + strand, within A4249_RS15480 at 3134.425 kb on + strand, within A4249_RS15480 at 3134.425 kb on + strand, within A4249_RS15480 at 3134.426 kb on - strand, within A4249_RS15480
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 3,131,993 + A4249_RS15465 0.50 -0.5 3,131,994 - A4249_RS15465 0.51 +1.1 3,132,071 + A4249_RS15465 0.61 +1.3 3,132,071 + A4249_RS15465 0.61 +0.1 3,132,071 + A4249_RS15465 0.61 -0.2 3,132,071 + A4249_RS15465 0.61 -1.0 3,132,071 + A4249_RS15465 0.61 +0.6 3,132,071 + A4249_RS15465 0.61 +0.8 3,132,071 + A4249_RS15465 0.61 -0.7 3,132,071 + A4249_RS15465 0.61 -0.5 3,132,072 - A4249_RS15465 0.61 +0.3 3,132,072 - A4249_RS15465 0.61 -1.1 3,132,072 - A4249_RS15465 0.61 -0.6 3,132,072 - A4249_RS15465 0.61 -1.0 3,132,072 - A4249_RS15465 0.61 -0.9 3,132,072 - A4249_RS15465 0.61 -0.4 3,132,072 - A4249_RS15465 0.61 -1.8 3,132,080 + A4249_RS15465 0.62 -0.1 3,132,080 + A4249_RS15465 0.62 +0.7 3,132,080 + A4249_RS15465 0.62 +0.5 3,132,080 + A4249_RS15465 0.62 +0.3 3,132,080 + A4249_RS15465 0.62 -1.8 3,132,080 + A4249_RS15465 0.62 +0.3 3,132,080 + A4249_RS15465 0.62 -0.7 3,132,081 - A4249_RS15465 0.62 -0.5 3,132,081 - A4249_RS15465 0.62 +0.3 3,132,081 - A4249_RS15465 0.62 +0.3 3,132,081 - A4249_RS15465 0.62 +2.0 3,132,081 - A4249_RS15465 0.62 -0.3 3,132,081 - A4249_RS15465 0.62 -1.6 3,132,081 - A4249_RS15465 0.62 -1.7 3,132,081 - A4249_RS15465 0.62 -1.1 3,132,081 - A4249_RS15465 0.62 +1.0 3,132,081 - A4249_RS15465 0.62 -0.7 3,132,081 - A4249_RS15465 0.62 +0.8 3,132,081 - A4249_RS15465 0.62 +0.9 3,132,098 + A4249_RS15465 0.64 -0.6 3,132,098 + A4249_RS15465 0.64 +0.8 3,132,099 - A4249_RS15465 0.64 -0.3 3,132,099 - A4249_RS15465 0.64 -0.0 3,132,099 - A4249_RS15465 0.64 -1.0 3,132,099 - A4249_RS15465 0.64 -0.4 3,132,308 + -0.0 3,132,308 + +0.7 3,132,308 + -1.7 3,132,308 + -1.8 3,132,309 - -0.1 3,132,309 - +1.1 3,132,309 - +0.9 3,132,309 - +0.2 3,132,609 + A4249_RS15470 0.21 -2.0 3,132,610 - A4249_RS15470 0.21 -0.4 3,132,714 + A4249_RS15470 0.72 +0.2 3,132,715 - A4249_RS15470 0.73 -0.7 3,132,768 + -1.6 3,132,768 + -0.3 3,132,768 + +1.1 3,132,769 - +0.5 3,132,793 - +0.8 3,132,793 - -0.7 3,132,856 + -0.1 3,132,856 + -2.2 3,132,856 + -0.5 3,132,857 - -0.3 3,132,857 - +0.3 3,132,933 + -0.7 3,132,948 + A4249_RS15475 0.10 -1.5 3,132,948 + A4249_RS15475 0.10 -0.7 3,132,948 + A4249_RS15475 0.10 -0.1 3,132,948 + A4249_RS15475 0.10 +0.3 3,132,948 + A4249_RS15475 0.10 +0.2 3,132,949 - A4249_RS15475 0.10 +1.9 3,132,949 - A4249_RS15475 0.10 +0.6 3,132,949 - A4249_RS15475 0.10 -0.4 3,132,949 - A4249_RS15475 0.10 -0.7 3,133,269 + A4249_RS15475 0.45 +0.2 3,133,283 - A4249_RS15475 0.46 -0.7 3,133,291 + A4249_RS15475 0.47 -0.3 3,133,291 + A4249_RS15475 0.47 +0.3 3,133,292 - A4249_RS15475 0.47 -0.8 3,133,292 - A4249_RS15475 0.47 -0.4 3,133,292 - A4249_RS15475 0.47 +0.3 3,133,522 + A4249_RS15475 0.72 -0.7 3,133,522 + A4249_RS15475 0.72 +0.3 3,133,522 + A4249_RS15475 0.72 +0.3 3,133,522 + A4249_RS15475 0.72 +0.1 3,133,523 - A4249_RS15475 0.72 -0.8 3,133,796 + -0.4 3,133,796 + +0.1 3,134,066 - A4249_RS15480 0.10 +0.6 3,134,066 - A4249_RS15480 0.10 -0.5 3,134,071 + A4249_RS15480 0.11 -0.9 3,134,071 + A4249_RS15480 0.11 -0.3 3,134,071 + A4249_RS15480 0.11 +3.9 3,134,071 + A4249_RS15480 0.11 +1.9 3,134,071 + A4249_RS15480 0.11 +1.7 3,134,072 - A4249_RS15480 0.11 +0.4 3,134,072 - A4249_RS15480 0.11 +0.1 3,134,072 - A4249_RS15480 0.11 +2.9 3,134,072 - A4249_RS15480 0.11 +1.1 3,134,072 - A4249_RS15480 0.11 +0.3 3,134,224 + A4249_RS15480 0.18 +0.3 3,134,224 + A4249_RS15480 0.18 +0.1 3,134,224 + A4249_RS15480 0.18 +0.3 3,134,225 - A4249_RS15480 0.18 +0.1 3,134,225 - A4249_RS15480 0.18 -0.4 3,134,225 - A4249_RS15480 0.18 +0.9 3,134,263 + A4249_RS15480 0.19 +1.7 3,134,263 + A4249_RS15480 0.19 -1.5 3,134,264 - A4249_RS15480 0.19 -0.2 3,134,425 + A4249_RS15480 0.27 -0.1 3,134,425 + A4249_RS15480 0.27 +0.3 3,134,425 + A4249_RS15480 0.27 -1.9 3,134,425 + A4249_RS15480 0.27 +0.1 3,134,425 + A4249_RS15480 0.27 -0.9 3,134,425 + A4249_RS15480 0.27 +4.0 3,134,425 + A4249_RS15480 0.27 -0.4 3,134,426 - A4249_RS15480 0.27 +0.7
Or see this region's nucleotide sequence