Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS14430 and A4249_RS14435 are separated by 41 nucleotides A4249_RS14435 and A4249_RS14440 are separated by 56 nucleotides A4249_RS14440 and A4249_RS14445 are separated by 141 nucleotides
A4249_RS14430: A4249_RS14430 - 2-oxoglutarate dehydrogenase E1 component, at 2,918,114 to 2,921,125
_RS14430
A4249_RS14435: A4249_RS14435 - 2-oxoglutarate dehydrogenase complex dihydrolipoyllysine-residue succinyltransferase, at 2,921,167 to 2,922,693
_RS14435
A4249_RS14440: A4249_RS14440 - glutathione S-transferase family protein, at 2,922,750 to 2,923,361
_RS14440
A4249_RS14445: A4249_RS14445 - hypothetical protein, at 2,923,503 to 2,923,865
_RS14445
Position (kb)
2921
2922
2923 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2921.126 kb on + strand at 2921.126 kb on + strand at 2921.126 kb on + strand at 2921.126 kb on + strand at 2921.126 kb on + strand at 2921.126 kb on + strand at 2921.132 kb on + strand at 2921.132 kb on + strand at 2921.134 kb on + strand at 2922.762 kb on + strand at 2922.797 kb on + strand at 2922.825 kb on + strand, within A4249_RS14440 at 2922.825 kb on + strand, within A4249_RS14440 at 2922.825 kb on + strand, within A4249_RS14440 at 2922.825 kb on + strand, within A4249_RS14440 at 2922.826 kb on - strand, within A4249_RS14440 at 2922.826 kb on - strand, within A4249_RS14440 at 2922.876 kb on + strand, within A4249_RS14440 at 2922.876 kb on + strand, within A4249_RS14440 at 2923.041 kb on + strand, within A4249_RS14440 at 2923.041 kb on + strand, within A4249_RS14440 at 2923.042 kb on - strand, within A4249_RS14440 at 2923.042 kb on - strand, within A4249_RS14440 at 2923.042 kb on - strand, within A4249_RS14440 at 2923.212 kb on + strand, within A4249_RS14440 at 2923.212 kb on + strand, within A4249_RS14440 at 2923.213 kb on - strand, within A4249_RS14440 at 2923.213 kb on - strand, within A4249_RS14440 at 2923.213 kb on - strand, within A4249_RS14440 at 2923.213 kb on - strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.214 kb on + strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.215 kb on - strand, within A4249_RS14440 at 2923.230 kb on + strand, within A4249_RS14440 at 2923.392 kb on + strand at 2923.443 kb on + strand at 2923.443 kb on + strand at 2923.443 kb on + strand at 2923.444 kb on - strand at 2923.444 kb on - strand at 2923.444 kb on - strand at 2923.466 kb on + strand at 2923.466 kb on + strand at 2923.467 kb on - strand at 2923.499 kb on - strand at 2923.509 kb on + strand at 2923.509 kb on + strand at 2923.509 kb on + strand at 2923.509 kb on + strand at 2923.510 kb on - strand at 2923.510 kb on - strand at 2923.510 kb on - strand at 2923.510 kb on - strand at 2923.510 kb on - strand at 2923.510 kb on - strand at 2923.536 kb on + strand at 2923.537 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 2,921,126 + -1.5 2,921,126 + -0.6 2,921,126 + -2.6 2,921,126 + -0.2 2,921,126 + -0.0 2,921,126 + +1.6 2,921,132 + -2.4 2,921,132 + +0.3 2,921,134 + -0.2 2,922,762 + -0.6 2,922,797 + -0.0 2,922,825 + A4249_RS14440 0.12 -2.2 2,922,825 + A4249_RS14440 0.12 -0.3 2,922,825 + A4249_RS14440 0.12 -0.8 2,922,825 + A4249_RS14440 0.12 +0.6 2,922,826 - A4249_RS14440 0.12 -2.2 2,922,826 - A4249_RS14440 0.12 -0.9 2,922,876 + A4249_RS14440 0.21 -0.3 2,922,876 + A4249_RS14440 0.21 +0.3 2,923,041 + A4249_RS14440 0.48 -0.4 2,923,041 + A4249_RS14440 0.48 +0.8 2,923,042 - A4249_RS14440 0.48 +2.4 2,923,042 - A4249_RS14440 0.48 +1.4 2,923,042 - A4249_RS14440 0.48 -0.1 2,923,212 + A4249_RS14440 0.75 +0.1 2,923,212 + A4249_RS14440 0.75 +0.2 2,923,213 - A4249_RS14440 0.76 -0.4 2,923,213 - A4249_RS14440 0.76 +0.3 2,923,213 - A4249_RS14440 0.76 +1.8 2,923,213 - A4249_RS14440 0.76 -0.4 2,923,214 + A4249_RS14440 0.76 +0.5 2,923,214 + A4249_RS14440 0.76 -1.6 2,923,214 + A4249_RS14440 0.76 -0.1 2,923,214 + A4249_RS14440 0.76 -1.4 2,923,214 + A4249_RS14440 0.76 -0.8 2,923,214 + A4249_RS14440 0.76 +0.2 2,923,214 + A4249_RS14440 0.76 -0.5 2,923,214 + A4249_RS14440 0.76 +0.1 2,923,214 + A4249_RS14440 0.76 -0.6 2,923,215 - A4249_RS14440 0.76 -0.5 2,923,215 - A4249_RS14440 0.76 +0.1 2,923,215 - A4249_RS14440 0.76 +0.2 2,923,215 - A4249_RS14440 0.76 +0.0 2,923,215 - A4249_RS14440 0.76 -0.1 2,923,215 - A4249_RS14440 0.76 -0.1 2,923,215 - A4249_RS14440 0.76 -0.7 2,923,215 - A4249_RS14440 0.76 +0.2 2,923,215 - A4249_RS14440 0.76 -0.1 2,923,215 - A4249_RS14440 0.76 -0.8 2,923,215 - A4249_RS14440 0.76 -3.1 2,923,215 - A4249_RS14440 0.76 +0.0 2,923,215 - A4249_RS14440 0.76 +1.2 2,923,230 + A4249_RS14440 0.78 -0.2 2,923,392 + -0.3 2,923,443 + +0.6 2,923,443 + -0.6 2,923,443 + +0.2 2,923,444 - +0.4 2,923,444 - -0.5 2,923,444 - +2.0 2,923,466 + +0.1 2,923,466 + -1.0 2,923,467 - -2.9 2,923,499 - -0.4 2,923,509 + +0.4 2,923,509 + +0.4 2,923,509 + +1.4 2,923,509 + -1.9 2,923,510 - -1.2 2,923,510 - -0.0 2,923,510 - -2.4 2,923,510 - +1.0 2,923,510 - -0.3 2,923,510 - -1.6 2,923,536 + -1.5 2,923,537 - -1.3
Or see this region's nucleotide sequence