Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13575 and A4249_RS13580 overlap by 4 nucleotides A4249_RS13580 and A4249_RS13585 are separated by 232 nucleotides A4249_RS13585 and A4249_RS13590 are separated by 51 nucleotides
A4249_RS13575: A4249_RS13575 - GNAT family N-acetyltransferase, at 2,742,523 to 2,743,020
_RS13575
A4249_RS13580: A4249_RS13580 - UrcA family protein, at 2,743,017 to 2,743,322
_RS13580
A4249_RS13585: A4249_RS13585 - translational GTPase TypA, at 2,743,555 to 2,745,387
_RS13585
A4249_RS13590: A4249_RS13590 - [protein-PII] uridylyltransferase, at 2,745,439 to 2,748,144
_RS13590
Position (kb)
2743
2744
2745
2746 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 2742.644 kb on - strand, within A4249_RS13575 at 2742.644 kb on - strand, within A4249_RS13575 at 2742.694 kb on + strand, within A4249_RS13575 at 2742.694 kb on + strand, within A4249_RS13575 at 2742.695 kb on - strand, within A4249_RS13575 at 2742.707 kb on - strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.781 kb on + strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.782 kb on - strand, within A4249_RS13575 at 2742.978 kb on + strand at 2742.979 kb on - strand at 2742.982 kb on + strand at 2742.982 kb on + strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2742.983 kb on - strand at 2743.000 kb on + strand at 2743.000 kb on + strand at 2743.000 kb on + strand at 2743.001 kb on - strand at 2743.001 kb on - strand at 2743.001 kb on - strand at 2743.001 kb on - strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.002 kb on + strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.003 kb on - strand at 2743.018 kb on + strand at 2743.018 kb on + strand at 2743.090 kb on + strand, within A4249_RS13580 at 2743.090 kb on + strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.091 kb on - strand, within A4249_RS13580 at 2743.235 kb on + strand, within A4249_RS13580 at 2743.235 kb on + strand, within A4249_RS13580 at 2743.414 kb on - strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.475 kb on + strand at 2743.476 kb on - strand at 2743.476 kb on - strand at 2744.617 kb on - strand, within A4249_RS13585 at 2745.386 kb on - strand at 2745.425 kb on + strand at 2745.426 kb on - strand at 2745.426 kb on - strand at 2745.427 kb on + strand at 2745.427 kb on + strand at 2745.428 kb on - strand at 2745.428 kb on - strand at 2745.532 kb on + strand at 2745.532 kb on + strand at 2745.532 kb on + strand at 2745.532 kb on + strand at 2745.533 kb on - strand at 2745.533 kb on - strand at 2745.533 kb on - strand at 2745.533 kb on - strand at 2745.533 kb on - strand at 2745.604 kb on + strand at 2745.820 kb on + strand, within A4249_RS13590 at 2745.820 kb on + strand, within A4249_RS13590 at 2745.820 kb on + strand, within A4249_RS13590 at 2745.820 kb on + strand, within A4249_RS13590 at 2745.820 kb on + strand, within A4249_RS13590 at 2745.821 kb on - strand, within A4249_RS13590 at 2745.821 kb on - strand, within A4249_RS13590 at 2745.821 kb on - strand, within A4249_RS13590 at 2745.821 kb on - strand, within A4249_RS13590 at 2745.821 kb on - strand, within A4249_RS13590 at 2745.821 kb on - strand, within A4249_RS13590 at 2745.821 kb on - strand, within A4249_RS13590 at 2746.135 kb on + strand, within A4249_RS13590 at 2746.136 kb on - strand, within A4249_RS13590 at 2746.259 kb on + strand, within A4249_RS13590 at 2746.259 kb on + strand, within A4249_RS13590 at 2746.259 kb on + strand, within A4249_RS13590 at 2746.260 kb on - strand, within A4249_RS13590 at 2746.260 kb on - strand, within A4249_RS13590 at 2746.387 kb on + strand, within A4249_RS13590
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 2,742,644 - A4249_RS13575 0.24 -0.8 2,742,644 - A4249_RS13575 0.24 +0.4 2,742,694 + A4249_RS13575 0.34 -0.3 2,742,694 + A4249_RS13575 0.34 +0.4 2,742,695 - A4249_RS13575 0.35 -1.6 2,742,707 - A4249_RS13575 0.37 -0.1 2,742,781 + A4249_RS13575 0.52 -1.6 2,742,781 + A4249_RS13575 0.52 +0.1 2,742,781 + A4249_RS13575 0.52 +0.5 2,742,781 + A4249_RS13575 0.52 -0.3 2,742,781 + A4249_RS13575 0.52 -1.5 2,742,781 + A4249_RS13575 0.52 +0.2 2,742,782 - A4249_RS13575 0.52 -0.9 2,742,782 - A4249_RS13575 0.52 +0.4 2,742,782 - A4249_RS13575 0.52 +2.4 2,742,782 - A4249_RS13575 0.52 -1.4 2,742,782 - A4249_RS13575 0.52 -0.5 2,742,782 - A4249_RS13575 0.52 -1.5 2,742,782 - A4249_RS13575 0.52 -1.8 2,742,782 - A4249_RS13575 0.52 +0.3 2,742,978 + +0.4 2,742,979 - -0.5 2,742,982 + -0.1 2,742,982 + +0.4 2,742,983 - -1.0 2,742,983 - -2.2 2,742,983 - +0.4 2,742,983 - -0.9 2,742,983 - +0.2 2,743,000 + -0.0 2,743,000 + -0.3 2,743,000 + -0.2 2,743,001 - -0.8 2,743,001 - -0.0 2,743,001 - +0.0 2,743,001 - -0.4 2,743,002 + +0.1 2,743,002 + -0.6 2,743,002 + -0.5 2,743,002 + +0.7 2,743,002 + -0.6 2,743,002 + -0.1 2,743,002 + -0.7 2,743,002 + +0.8 2,743,002 + -1.2 2,743,002 + -0.1 2,743,003 - +0.7 2,743,003 - -0.5 2,743,003 - -1.0 2,743,003 - -1.0 2,743,003 - +1.0 2,743,003 - -1.9 2,743,003 - -0.9 2,743,003 - +0.1 2,743,003 - -1.4 2,743,003 - +0.4 2,743,018 + -0.2 2,743,018 + -3.1 2,743,090 + A4249_RS13580 0.24 -0.5 2,743,090 + A4249_RS13580 0.24 -2.6 2,743,091 - A4249_RS13580 0.24 +0.4 2,743,091 - A4249_RS13580 0.24 -0.3 2,743,091 - A4249_RS13580 0.24 +0.3 2,743,091 - A4249_RS13580 0.24 -0.2 2,743,091 - A4249_RS13580 0.24 -0.2 2,743,091 - A4249_RS13580 0.24 +0.0 2,743,235 + A4249_RS13580 0.71 +1.6 2,743,235 + A4249_RS13580 0.71 +0.2 2,743,414 - -0.6 2,743,475 + -0.2 2,743,475 + -0.4 2,743,475 + -0.7 2,743,475 + +0.4 2,743,475 + +0.0 2,743,475 + +1.8 2,743,476 - +2.7 2,743,476 - -0.4 2,744,617 - A4249_RS13585 0.58 -2.6 2,745,386 - -2.6 2,745,425 + +0.6 2,745,426 - +0.7 2,745,426 - -1.9 2,745,427 + +1.4 2,745,427 + +0.0 2,745,428 - -0.6 2,745,428 - -0.8 2,745,532 + -1.9 2,745,532 + -3.1 2,745,532 + -3.2 2,745,532 + -1.6 2,745,533 - -2.2 2,745,533 - -1.6 2,745,533 - -3.5 2,745,533 - -1.9 2,745,533 - -2.2 2,745,604 + -2.2 2,745,820 + A4249_RS13590 0.14 -1.9 2,745,820 + A4249_RS13590 0.14 -3.2 2,745,820 + A4249_RS13590 0.14 -1.9 2,745,820 + A4249_RS13590 0.14 -1.2 2,745,820 + A4249_RS13590 0.14 -0.6 2,745,821 - A4249_RS13590 0.14 -2.6 2,745,821 - A4249_RS13590 0.14 -1.9 2,745,821 - A4249_RS13590 0.14 -1.6 2,745,821 - A4249_RS13590 0.14 -2.9 2,745,821 - A4249_RS13590 0.14 -2.8 2,745,821 - A4249_RS13590 0.14 -3.7 2,745,821 - A4249_RS13590 0.14 -1.9 2,746,135 + A4249_RS13590 0.26 -2.9 2,746,136 - A4249_RS13590 0.26 -2.9 2,746,259 + A4249_RS13590 0.30 -2.4 2,746,259 + A4249_RS13590 0.30 -2.6 2,746,259 + A4249_RS13590 0.30 -2.4 2,746,260 - A4249_RS13590 0.30 -1.9 2,746,260 - A4249_RS13590 0.30 -2.4 2,746,387 + A4249_RS13590 0.35 -0.6
Or see this region's nucleotide sequence