Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS13585

Experiment: D-Glucose (C); 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS13575 and A4249_RS13580 overlap by 4 nucleotidesA4249_RS13580 and A4249_RS13585 are separated by 232 nucleotidesA4249_RS13585 and A4249_RS13590 are separated by 51 nucleotides A4249_RS13575: A4249_RS13575 - GNAT family N-acetyltransferase, at 2,742,523 to 2,743,020 _RS13575 A4249_RS13580: A4249_RS13580 - UrcA family protein, at 2,743,017 to 2,743,322 _RS13580 A4249_RS13585: A4249_RS13585 - translational GTPase TypA, at 2,743,555 to 2,745,387 _RS13585 A4249_RS13590: A4249_RS13590 - [protein-PII] uridylyltransferase, at 2,745,439 to 2,748,144 _RS13590 Position (kb) 2743 2744 2745 2746Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 2742.644 kb on - strand, within A4249_RS13575at 2742.644 kb on - strand, within A4249_RS13575at 2742.694 kb on + strand, within A4249_RS13575at 2742.694 kb on + strand, within A4249_RS13575at 2742.695 kb on - strand, within A4249_RS13575at 2742.707 kb on - strand, within A4249_RS13575at 2742.781 kb on + strand, within A4249_RS13575at 2742.781 kb on + strand, within A4249_RS13575at 2742.781 kb on + strand, within A4249_RS13575at 2742.781 kb on + strand, within A4249_RS13575at 2742.781 kb on + strand, within A4249_RS13575at 2742.781 kb on + strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.782 kb on - strand, within A4249_RS13575at 2742.978 kb on + strandat 2742.979 kb on - strandat 2742.982 kb on + strandat 2742.982 kb on + strandat 2742.983 kb on - strandat 2742.983 kb on - strandat 2742.983 kb on - strandat 2742.983 kb on - strandat 2742.983 kb on - strandat 2743.000 kb on + strandat 2743.000 kb on + strandat 2743.000 kb on + strandat 2743.001 kb on - strandat 2743.001 kb on - strandat 2743.001 kb on - strandat 2743.001 kb on - strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.002 kb on + strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.003 kb on - strandat 2743.018 kb on + strandat 2743.018 kb on + strandat 2743.090 kb on + strand, within A4249_RS13580at 2743.090 kb on + strand, within A4249_RS13580at 2743.091 kb on - strand, within A4249_RS13580at 2743.091 kb on - strand, within A4249_RS13580at 2743.091 kb on - strand, within A4249_RS13580at 2743.091 kb on - strand, within A4249_RS13580at 2743.091 kb on - strand, within A4249_RS13580at 2743.091 kb on - strand, within A4249_RS13580at 2743.235 kb on + strand, within A4249_RS13580at 2743.235 kb on + strand, within A4249_RS13580at 2743.414 kb on - strandat 2743.475 kb on + strandat 2743.475 kb on + strandat 2743.475 kb on + strandat 2743.475 kb on + strandat 2743.475 kb on + strandat 2743.475 kb on + strandat 2743.476 kb on - strandat 2743.476 kb on - strandat 2744.617 kb on - strand, within A4249_RS13585at 2745.386 kb on - strandat 2745.425 kb on + strandat 2745.426 kb on - strandat 2745.426 kb on - strandat 2745.427 kb on + strandat 2745.427 kb on + strandat 2745.428 kb on - strandat 2745.428 kb on - strandat 2745.532 kb on + strandat 2745.532 kb on + strandat 2745.532 kb on + strandat 2745.532 kb on + strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.533 kb on - strandat 2745.604 kb on + strandat 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.820 kb on + strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2745.821 kb on - strand, within A4249_RS13590at 2746.135 kb on + strand, within A4249_RS13590at 2746.136 kb on - strand, within A4249_RS13590at 2746.259 kb on + strand, within A4249_RS13590at 2746.259 kb on + strand, within A4249_RS13590at 2746.259 kb on + strand, within A4249_RS13590at 2746.260 kb on - strand, within A4249_RS13590at 2746.260 kb on - strand, within A4249_RS13590at 2746.387 kb on + strand, within A4249_RS13590

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 20C
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2,742,644 - A4249_RS13575 0.24 -0.8
2,742,644 - A4249_RS13575 0.24 +0.4
2,742,694 + A4249_RS13575 0.34 -0.3
2,742,694 + A4249_RS13575 0.34 +0.4
2,742,695 - A4249_RS13575 0.35 -1.6
2,742,707 - A4249_RS13575 0.37 -0.1
2,742,781 + A4249_RS13575 0.52 -1.6
2,742,781 + A4249_RS13575 0.52 +0.1
2,742,781 + A4249_RS13575 0.52 +0.5
2,742,781 + A4249_RS13575 0.52 -0.3
2,742,781 + A4249_RS13575 0.52 -1.5
2,742,781 + A4249_RS13575 0.52 +0.2
2,742,782 - A4249_RS13575 0.52 -0.9
2,742,782 - A4249_RS13575 0.52 +0.4
2,742,782 - A4249_RS13575 0.52 +2.4
2,742,782 - A4249_RS13575 0.52 -1.4
2,742,782 - A4249_RS13575 0.52 -0.5
2,742,782 - A4249_RS13575 0.52 -1.5
2,742,782 - A4249_RS13575 0.52 -1.8
2,742,782 - A4249_RS13575 0.52 +0.3
2,742,978 + +0.4
2,742,979 - -0.5
2,742,982 + -0.1
2,742,982 + +0.4
2,742,983 - -1.0
2,742,983 - -2.2
2,742,983 - +0.4
2,742,983 - -0.9
2,742,983 - +0.2
2,743,000 + -0.0
2,743,000 + -0.3
2,743,000 + -0.2
2,743,001 - -0.8
2,743,001 - -0.0
2,743,001 - +0.0
2,743,001 - -0.4
2,743,002 + +0.1
2,743,002 + -0.6
2,743,002 + -0.5
2,743,002 + +0.7
2,743,002 + -0.6
2,743,002 + -0.1
2,743,002 + -0.7
2,743,002 + +0.8
2,743,002 + -1.2
2,743,002 + -0.1
2,743,003 - +0.7
2,743,003 - -0.5
2,743,003 - -1.0
2,743,003 - -1.0
2,743,003 - +1.0
2,743,003 - -1.9
2,743,003 - -0.9
2,743,003 - +0.1
2,743,003 - -1.4
2,743,003 - +0.4
2,743,018 + -0.2
2,743,018 + -3.1
2,743,090 + A4249_RS13580 0.24 -0.5
2,743,090 + A4249_RS13580 0.24 -2.6
2,743,091 - A4249_RS13580 0.24 +0.4
2,743,091 - A4249_RS13580 0.24 -0.3
2,743,091 - A4249_RS13580 0.24 +0.3
2,743,091 - A4249_RS13580 0.24 -0.2
2,743,091 - A4249_RS13580 0.24 -0.2
2,743,091 - A4249_RS13580 0.24 +0.0
2,743,235 + A4249_RS13580 0.71 +1.6
2,743,235 + A4249_RS13580 0.71 +0.2
2,743,414 - -0.6
2,743,475 + -0.2
2,743,475 + -0.4
2,743,475 + -0.7
2,743,475 + +0.4
2,743,475 + +0.0
2,743,475 + +1.8
2,743,476 - +2.7
2,743,476 - -0.4
2,744,617 - A4249_RS13585 0.58 -2.6
2,745,386 - -2.6
2,745,425 + +0.6
2,745,426 - +0.7
2,745,426 - -1.9
2,745,427 + +1.4
2,745,427 + +0.0
2,745,428 - -0.6
2,745,428 - -0.8
2,745,532 + -1.9
2,745,532 + -3.1
2,745,532 + -3.2
2,745,532 + -1.6
2,745,533 - -2.2
2,745,533 - -1.6
2,745,533 - -3.5
2,745,533 - -1.9
2,745,533 - -2.2
2,745,604 + -2.2
2,745,820 + A4249_RS13590 0.14 -1.9
2,745,820 + A4249_RS13590 0.14 -3.2
2,745,820 + A4249_RS13590 0.14 -1.9
2,745,820 + A4249_RS13590 0.14 -1.2
2,745,820 + A4249_RS13590 0.14 -0.6
2,745,821 - A4249_RS13590 0.14 -2.6
2,745,821 - A4249_RS13590 0.14 -1.9
2,745,821 - A4249_RS13590 0.14 -1.6
2,745,821 - A4249_RS13590 0.14 -2.9
2,745,821 - A4249_RS13590 0.14 -2.8
2,745,821 - A4249_RS13590 0.14 -3.7
2,745,821 - A4249_RS13590 0.14 -1.9
2,746,135 + A4249_RS13590 0.26 -2.9
2,746,136 - A4249_RS13590 0.26 -2.9
2,746,259 + A4249_RS13590 0.30 -2.4
2,746,259 + A4249_RS13590 0.30 -2.6
2,746,259 + A4249_RS13590 0.30 -2.4
2,746,260 - A4249_RS13590 0.30 -1.9
2,746,260 - A4249_RS13590 0.30 -2.4
2,746,387 + A4249_RS13590 0.35 -0.6

Or see this region's nucleotide sequence