Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13155 and A4249_RS13160 overlap by 4 nucleotides A4249_RS13160 and A4249_RS13165 are separated by 47 nucleotides
A4249_RS13155: A4249_RS13155 - heparinase II/III family protein, at 2,647,986 to 2,649,833
_RS13155
A4249_RS13160: A4249_RS13160 - ribulose-phosphate 3-epimerase, at 2,649,830 to 2,650,495
_RS13160
A4249_RS13165: A4249_RS13165 - RsmB/NOP family class I SAM-dependent RNA methyltransferase, at 2,650,543 to 2,651,880
_RS13165
Position (kb)
2649
2650
2651 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2649.206 kb on + strand, within A4249_RS13155 at 2649.643 kb on + strand, within A4249_RS13155 at 2649.643 kb on + strand, within A4249_RS13155 at 2649.644 kb on - strand, within A4249_RS13155 at 2650.763 kb on + strand, within A4249_RS13165 at 2650.763 kb on + strand, within A4249_RS13165 at 2650.763 kb on + strand, within A4249_RS13165 at 2650.763 kb on + strand, within A4249_RS13165 at 2650.763 kb on + strand, within A4249_RS13165 at 2650.763 kb on + strand, within A4249_RS13165 at 2650.764 kb on - strand, within A4249_RS13165 at 2650.764 kb on - strand, within A4249_RS13165 at 2650.764 kb on - strand, within A4249_RS13165 at 2650.764 kb on - strand, within A4249_RS13165 at 2650.764 kb on - strand, within A4249_RS13165 at 2650.764 kb on - strand, within A4249_RS13165 at 2651.372 kb on + strand, within A4249_RS13165 at 2651.372 kb on + strand, within A4249_RS13165 at 2651.372 kb on + strand, within A4249_RS13165 at 2651.373 kb on - strand, within A4249_RS13165 at 2651.373 kb on - strand, within A4249_RS13165 at 2651.373 kb on - strand, within A4249_RS13165 at 2651.483 kb on + strand, within A4249_RS13165 at 2651.483 kb on + strand, within A4249_RS13165 at 2651.484 kb on - strand, within A4249_RS13165 at 2651.484 kb on - strand, within A4249_RS13165 at 2651.484 kb on - strand, within A4249_RS13165
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 2,649,206 + A4249_RS13155 0.66 +0.3 2,649,643 + A4249_RS13155 0.90 -0.6 2,649,643 + A4249_RS13155 0.90 -0.1 2,649,644 - A4249_RS13155 0.90 +0.2 2,650,763 + A4249_RS13165 0.16 +0.4 2,650,763 + A4249_RS13165 0.16 -0.6 2,650,763 + A4249_RS13165 0.16 +2.0 2,650,763 + A4249_RS13165 0.16 -1.2 2,650,763 + A4249_RS13165 0.16 -0.2 2,650,763 + A4249_RS13165 0.16 -1.3 2,650,764 - A4249_RS13165 0.17 +0.4 2,650,764 - A4249_RS13165 0.17 -0.0 2,650,764 - A4249_RS13165 0.17 -0.2 2,650,764 - A4249_RS13165 0.17 +0.7 2,650,764 - A4249_RS13165 0.17 -1.6 2,650,764 - A4249_RS13165 0.17 -0.4 2,651,372 + A4249_RS13165 0.62 +2.0 2,651,372 + A4249_RS13165 0.62 +0.4 2,651,372 + A4249_RS13165 0.62 +1.4 2,651,373 - A4249_RS13165 0.62 +0.4 2,651,373 - A4249_RS13165 0.62 +3.0 2,651,373 - A4249_RS13165 0.62 +0.2 2,651,483 + A4249_RS13165 0.70 +1.7 2,651,483 + A4249_RS13165 0.70 -2.2 2,651,484 - A4249_RS13165 0.70 -1.2 2,651,484 - A4249_RS13165 0.70 -0.5 2,651,484 - A4249_RS13165 0.70 +0.4
Or see this region's nucleotide sequence