Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS13060 and A4249_RS13065 are separated by 92 nucleotides A4249_RS13065 and A4249_RS13070 are separated by 39 nucleotides
A4249_RS13060: A4249_RS13060 - AGE family epimerase/isomerase, at 2,624,923 to 2,627,139
_RS13060
A4249_RS13065: A4249_RS13065 - glycosyltransferase family 1 protein, at 2,627,232 to 2,628,317
_RS13065
A4249_RS13070: A4249_RS13070 - phosphomannomutase/phosphoglucomutase, at 2,628,357 to 2,629,856
_RS13070
Position (kb)
2627
2628
2629 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1
2 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.240 kb on + strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.241 kb on - strand, within A4249_RS13060 at 2626.315 kb on + strand, within A4249_RS13060 at 2626.316 kb on - strand, within A4249_RS13060 at 2626.316 kb on - strand, within A4249_RS13060 at 2626.316 kb on - strand, within A4249_RS13060 at 2626.412 kb on + strand, within A4249_RS13060 at 2626.412 kb on + strand, within A4249_RS13060 at 2626.412 kb on + strand, within A4249_RS13060 at 2626.412 kb on + strand, within A4249_RS13060 at 2626.412 kb on + strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.413 kb on - strand, within A4249_RS13060 at 2626.416 kb on + strand, within A4249_RS13060 at 2626.416 kb on + strand, within A4249_RS13060 at 2626.417 kb on - strand, within A4249_RS13060 at 2626.417 kb on - strand, within A4249_RS13060 at 2626.417 kb on - strand, within A4249_RS13060 at 2626.443 kb on - strand, within A4249_RS13060 at 2626.465 kb on + strand, within A4249_RS13060 at 2626.466 kb on - strand, within A4249_RS13060 at 2626.466 kb on - strand, within A4249_RS13060 at 2626.562 kb on + strand, within A4249_RS13060 at 2626.563 kb on - strand, within A4249_RS13060 at 2626.603 kb on + strand, within A4249_RS13060 at 2626.603 kb on + strand, within A4249_RS13060 at 2626.697 kb on + strand, within A4249_RS13060 at 2626.697 kb on + strand, within A4249_RS13060 at 2626.697 kb on + strand, within A4249_RS13060 at 2626.697 kb on + strand, within A4249_RS13060 at 2626.698 kb on - strand, within A4249_RS13060 at 2626.759 kb on + strand, within A4249_RS13060 at 2626.759 kb on + strand, within A4249_RS13060 at 2626.759 kb on + strand, within A4249_RS13060 at 2626.759 kb on + strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.760 kb on - strand, within A4249_RS13060 at 2626.805 kb on + strand, within A4249_RS13060 at 2626.805 kb on + strand, within A4249_RS13060 at 2626.805 kb on + strand, within A4249_RS13060 at 2626.805 kb on + strand, within A4249_RS13060 at 2626.805 kb on + strand, within A4249_RS13060 at 2626.805 kb on + strand, within A4249_RS13060 at 2626.806 kb on - strand, within A4249_RS13060 at 2626.806 kb on - strand, within A4249_RS13060 at 2626.887 kb on + strand, within A4249_RS13060 at 2626.888 kb on - strand, within A4249_RS13060 at 2626.888 kb on - strand, within A4249_RS13060 at 2626.888 kb on - strand, within A4249_RS13060 at 2626.889 kb on + strand, within A4249_RS13060 at 2626.889 kb on + strand, within A4249_RS13060 at 2626.889 kb on + strand, within A4249_RS13060 at 2626.890 kb on - strand, within A4249_RS13060 at 2626.901 kb on + strand, within A4249_RS13060 at 2626.901 kb on + strand, within A4249_RS13060 at 2626.914 kb on + strand, within A4249_RS13060 at 2626.914 kb on + strand, within A4249_RS13060 at 2626.914 kb on + strand, within A4249_RS13060 at 2626.969 kb on + strand at 2626.970 kb on - strand at 2627.053 kb on + strand at 2627.053 kb on + strand at 2627.053 kb on + strand at 2627.053 kb on + strand at 2627.054 kb on - strand at 2627.054 kb on - strand at 2627.054 kb on - strand at 2627.071 kb on + strand at 2627.072 kb on - strand at 2627.112 kb on + strand at 2627.113 kb on - strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.114 kb on + strand at 2627.115 kb on - strand at 2627.115 kb on - strand at 2627.115 kb on - strand at 2627.115 kb on - strand at 2627.115 kb on - strand at 2627.115 kb on - strand at 2627.115 kb on - strand at 2627.115 kb on - strand at 2627.135 kb on + strand at 2627.135 kb on + strand at 2627.136 kb on - strand at 2627.136 kb on - strand at 2627.137 kb on + strand at 2627.137 kb on + strand at 2627.138 kb on - strand at 2627.138 kb on - strand at 2627.187 kb on + strand at 2627.187 kb on + strand at 2627.187 kb on + strand at 2627.202 kb on + strand at 2627.202 kb on + strand at 2627.202 kb on + strand at 2628.350 kb on + strand at 2628.350 kb on + strand at 2628.350 kb on + strand at 2628.350 kb on + strand at 2628.350 kb on + strand at 2628.350 kb on + strand at 2628.351 kb on - strand at 2628.351 kb on - strand at 2628.389 kb on + strand at 2628.390 kb on - strand at 2628.399 kb on + strand at 2628.399 kb on + strand at 2628.400 kb on - strand at 2628.441 kb on + strand at 2628.442 kb on - strand at 2628.442 kb on - strand at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.516 kb on + strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.517 kb on - strand, within A4249_RS13070 at 2628.518 kb on + strand, within A4249_RS13070 at 2628.573 kb on + strand, within A4249_RS13070 at 2628.575 kb on + strand, within A4249_RS13070 at 2628.576 kb on - strand, within A4249_RS13070 at 2628.576 kb on - strand, within A4249_RS13070 at 2628.576 kb on - strand, within A4249_RS13070 at 2628.576 kb on - strand, within A4249_RS13070 at 2628.576 kb on - strand, within A4249_RS13070 at 2628.666 kb on + strand, within A4249_RS13070 at 2628.666 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.879 kb on + strand, within A4249_RS13070 at 2628.880 kb on - strand, within A4249_RS13070 at 2628.880 kb on - strand, within A4249_RS13070 at 2628.880 kb on - strand, within A4249_RS13070 at 2628.880 kb on - strand, within A4249_RS13070 at 2628.880 kb on - strand, within A4249_RS13070 at 2628.880 kb on - strand, within A4249_RS13070 at 2628.880 kb on - strand, within A4249_RS13070 at 2629.026 kb on + strand, within A4249_RS13070 at 2629.026 kb on + strand, within A4249_RS13070 at 2629.027 kb on - strand, within A4249_RS13070 at 2629.027 kb on - strand, within A4249_RS13070 at 2629.041 kb on + strand, within A4249_RS13070 at 2629.041 kb on + strand, within A4249_RS13070 at 2629.041 kb on + strand, within A4249_RS13070 at 2629.042 kb on - strand, within A4249_RS13070 at 2629.272 kb on + strand, within A4249_RS13070 at 2629.273 kb on - strand, within A4249_RS13070 at 2629.273 kb on - strand, within A4249_RS13070 at 2629.273 kb on - strand, within A4249_RS13070 at 2629.317 kb on + strand, within A4249_RS13070 at 2629.317 kb on + strand, within A4249_RS13070 at 2629.317 kb on + strand, within A4249_RS13070 at 2629.317 kb on + strand, within A4249_RS13070 at 2629.317 kb on + strand, within A4249_RS13070
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 2,626,240 + A4249_RS13060 0.59 -1.9 2,626,240 + A4249_RS13060 0.59 -1.9 2,626,240 + A4249_RS13060 0.59 -1.6 2,626,240 + A4249_RS13060 0.59 -3.7 2,626,240 + A4249_RS13060 0.59 -1.9 2,626,240 + A4249_RS13060 0.59 -0.6 2,626,240 + A4249_RS13060 0.59 -2.4 2,626,240 + A4249_RS13060 0.59 -3.6 2,626,241 - A4249_RS13060 0.59 -1.9 2,626,241 - A4249_RS13060 0.59 -2.9 2,626,241 - A4249_RS13060 0.59 -1.9 2,626,241 - A4249_RS13060 0.59 -1.5 2,626,241 - A4249_RS13060 0.59 +0.4 2,626,241 - A4249_RS13060 0.59 -1.6 2,626,241 - A4249_RS13060 0.59 -3.2 2,626,241 - A4249_RS13060 0.59 +0.4 2,626,315 + A4249_RS13060 0.63 +0.4 2,626,316 - A4249_RS13060 0.63 -1.6 2,626,316 - A4249_RS13060 0.63 -2.8 2,626,316 - A4249_RS13060 0.63 -2.2 2,626,412 + A4249_RS13060 0.67 -1.6 2,626,412 + A4249_RS13060 0.67 -0.4 2,626,412 + A4249_RS13060 0.67 -1.9 2,626,412 + A4249_RS13060 0.67 +0.4 2,626,412 + A4249_RS13060 0.67 +2.4 2,626,413 - A4249_RS13060 0.67 -0.6 2,626,413 - A4249_RS13060 0.67 -1.9 2,626,413 - A4249_RS13060 0.67 -1.2 2,626,413 - A4249_RS13060 0.67 -3.7 2,626,413 - A4249_RS13060 0.67 -1.9 2,626,413 - A4249_RS13060 0.67 -0.6 2,626,413 - A4249_RS13060 0.67 -1.9 2,626,413 - A4249_RS13060 0.67 -3.1 2,626,416 + A4249_RS13060 0.67 -2.4 2,626,416 + A4249_RS13060 0.67 -2.2 2,626,417 - A4249_RS13060 0.67 -2.6 2,626,417 - A4249_RS13060 0.67 -0.6 2,626,417 - A4249_RS13060 0.67 -0.6 2,626,443 - A4249_RS13060 0.69 -0.6 2,626,465 + A4249_RS13060 0.70 -0.9 2,626,466 - A4249_RS13060 0.70 -1.6 2,626,466 - A4249_RS13060 0.70 -1.9 2,626,562 + A4249_RS13060 0.74 -0.9 2,626,563 - A4249_RS13060 0.74 -1.9 2,626,603 + A4249_RS13060 0.76 -1.9 2,626,603 + A4249_RS13060 0.76 -1.2 2,626,697 + A4249_RS13060 0.80 -0.8 2,626,697 + A4249_RS13060 0.80 -3.2 2,626,697 + A4249_RS13060 0.80 -2.3 2,626,697 + A4249_RS13060 0.80 -1.0 2,626,698 - A4249_RS13060 0.80 -1.3 2,626,759 + A4249_RS13060 0.83 -5.2 2,626,759 + A4249_RS13060 0.83 -1.2 2,626,759 + A4249_RS13060 0.83 +0.4 2,626,759 + A4249_RS13060 0.83 -0.6 2,626,760 - A4249_RS13060 0.83 -3.4 2,626,760 - A4249_RS13060 0.83 -2.4 2,626,760 - A4249_RS13060 0.83 -0.6 2,626,760 - A4249_RS13060 0.83 -3.9 2,626,760 - A4249_RS13060 0.83 -2.4 2,626,760 - A4249_RS13060 0.83 -1.6 2,626,760 - A4249_RS13060 0.83 -3.8 2,626,760 - A4249_RS13060 0.83 -4.0 2,626,760 - A4249_RS13060 0.83 -0.6 2,626,805 + A4249_RS13060 0.85 -0.6 2,626,805 + A4249_RS13060 0.85 -1.2 2,626,805 + A4249_RS13060 0.85 -1.8 2,626,805 + A4249_RS13060 0.85 -1.2 2,626,805 + A4249_RS13060 0.85 -1.2 2,626,805 + A4249_RS13060 0.85 -1.9 2,626,806 - A4249_RS13060 0.85 -4.6 2,626,806 - A4249_RS13060 0.85 +0.4 2,626,887 + A4249_RS13060 0.89 -0.2 2,626,888 - A4249_RS13060 0.89 -2.6 2,626,888 - A4249_RS13060 0.89 -1.2 2,626,888 - A4249_RS13060 0.89 -2.2 2,626,889 + A4249_RS13060 0.89 -2.4 2,626,889 + A4249_RS13060 0.89 -2.5 2,626,889 + A4249_RS13060 0.89 -0.2 2,626,890 - A4249_RS13060 0.89 -1.0 2,626,901 + A4249_RS13060 0.89 -5.1 2,626,901 + A4249_RS13060 0.89 -1.5 2,626,914 + A4249_RS13060 0.90 -1.9 2,626,914 + A4249_RS13060 0.90 -1.2 2,626,914 + A4249_RS13060 0.90 +0.4 2,626,969 + +1.1 2,626,970 - +0.4 2,627,053 + +0.4 2,627,053 + -4.4 2,627,053 + -1.2 2,627,053 + -3.3 2,627,054 - -2.9 2,627,054 - +0.4 2,627,054 - +0.4 2,627,071 + -1.2 2,627,072 - +0.1 2,627,112 + -1.2 2,627,113 - -1.5 2,627,114 + -2.4 2,627,114 + -1.2 2,627,114 + +0.7 2,627,114 + -0.2 2,627,114 + +1.1 2,627,114 + +0.1 2,627,114 + -0.6 2,627,114 + -1.2 2,627,114 + -0.1 2,627,115 - -1.9 2,627,115 - -2.4 2,627,115 - -0.6 2,627,115 - +0.4 2,627,115 - -3.2 2,627,115 - -1.2 2,627,115 - -1.2 2,627,115 - -2.9 2,627,135 + -5.7 2,627,135 + -1.2 2,627,136 - -1.2 2,627,136 - -1.2 2,627,137 + -0.3 2,627,137 + +0.4 2,627,138 - -1.0 2,627,138 - +0.5 2,627,187 + -0.5 2,627,187 + +0.3 2,627,187 + -0.0 2,627,202 + -2.5 2,627,202 + +1.4 2,627,202 + -0.5 2,628,350 + -0.3 2,628,350 + -0.1 2,628,350 + -0.6 2,628,350 + -0.5 2,628,350 + -2.3 2,628,350 + -0.0 2,628,351 - -0.9 2,628,351 - -0.5 2,628,389 + -2.2 2,628,390 - -0.7 2,628,399 + -0.9 2,628,399 + -1.2 2,628,400 - -2.1 2,628,441 + -0.9 2,628,442 - -2.6 2,628,442 - -2.9 2,628,516 + A4249_RS13070 0.11 -4.2 2,628,516 + A4249_RS13070 0.11 -0.6 2,628,516 + A4249_RS13070 0.11 -0.6 2,628,516 + A4249_RS13070 0.11 -1.9 2,628,516 + A4249_RS13070 0.11 -0.6 2,628,516 + A4249_RS13070 0.11 -4.4 2,628,516 + A4249_RS13070 0.11 -4.8 2,628,516 + A4249_RS13070 0.11 -2.2 2,628,516 + A4249_RS13070 0.11 -1.9 2,628,516 + A4249_RS13070 0.11 -3.5 2,628,516 + A4249_RS13070 0.11 -4.1 2,628,516 + A4249_RS13070 0.11 -1.6 2,628,516 + A4249_RS13070 0.11 -3.3 2,628,517 - A4249_RS13070 0.11 -2.4 2,628,517 - A4249_RS13070 0.11 +0.4 2,628,517 - A4249_RS13070 0.11 -1.2 2,628,517 - A4249_RS13070 0.11 +1.4 2,628,517 - A4249_RS13070 0.11 -1.5 2,628,517 - A4249_RS13070 0.11 -4.1 2,628,517 - A4249_RS13070 0.11 -2.1 2,628,517 - A4249_RS13070 0.11 -1.6 2,628,517 - A4249_RS13070 0.11 -0.6 2,628,518 + A4249_RS13070 0.11 -4.8 2,628,573 + A4249_RS13070 0.14 -1.2 2,628,575 + A4249_RS13070 0.15 -0.6 2,628,576 - A4249_RS13070 0.15 -2.2 2,628,576 - A4249_RS13070 0.15 +2.0 2,628,576 - A4249_RS13070 0.15 -0.4 2,628,576 - A4249_RS13070 0.15 -2.8 2,628,576 - A4249_RS13070 0.15 -2.9 2,628,666 + A4249_RS13070 0.21 -0.8 2,628,666 + A4249_RS13070 0.21 +0.4 2,628,879 + A4249_RS13070 0.35 +0.4 2,628,879 + A4249_RS13070 0.35 -3.5 2,628,879 + A4249_RS13070 0.35 -1.2 2,628,879 + A4249_RS13070 0.35 -2.2 2,628,879 + A4249_RS13070 0.35 -3.2 2,628,879 + A4249_RS13070 0.35 +1.4 2,628,879 + A4249_RS13070 0.35 -2.6 2,628,879 + A4249_RS13070 0.35 -1.9 2,628,879 + A4249_RS13070 0.35 -1.9 2,628,880 - A4249_RS13070 0.35 -1.6 2,628,880 - A4249_RS13070 0.35 -4.1 2,628,880 - A4249_RS13070 0.35 -1.6 2,628,880 - A4249_RS13070 0.35 -1.9 2,628,880 - A4249_RS13070 0.35 -3.5 2,628,880 - A4249_RS13070 0.35 -3.6 2,628,880 - A4249_RS13070 0.35 -2.6 2,629,026 + A4249_RS13070 0.45 -1.6 2,629,026 + A4249_RS13070 0.45 +0.4 2,629,027 - A4249_RS13070 0.45 -2.5 2,629,027 - A4249_RS13070 0.45 -3.2 2,629,041 + A4249_RS13070 0.46 -1.6 2,629,041 + A4249_RS13070 0.46 -0.7 2,629,041 + A4249_RS13070 0.46 -1.9 2,629,042 - A4249_RS13070 0.46 -3.4 2,629,272 + A4249_RS13070 0.61 +0.4 2,629,273 - A4249_RS13070 0.61 -1.2 2,629,273 - A4249_RS13070 0.61 -0.9 2,629,273 - A4249_RS13070 0.61 -1.8 2,629,317 + A4249_RS13070 0.64 +0.4 2,629,317 + A4249_RS13070 0.64 -0.6 2,629,317 + A4249_RS13070 0.64 -2.4 2,629,317 + A4249_RS13070 0.64 -1.6 2,629,317 + A4249_RS13070 0.64 -3.7
Or see this region's nucleotide sequence