Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS10005

Experiment: D-Glucose (C); 20C

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	D-Glucose (C); 20C
2,007,109	+		A4249_RS09995	0.90	+0.3
2,007,109	+		A4249_RS09995	0.90	-2.7
2,007,109	+		A4249_RS09995	0.90	-2.0
2,007,109	+		A4249_RS09995	0.90	-0.7
2,007,109	+		A4249_RS09995	0.90	-4.9
2,007,109	+		A4249_RS09995	0.90	-3.9
2,007,109	+		A4249_RS09995	0.90	-4.0
2,007,109	+		A4249_RS09995	0.90	-4.1
2,007,109	+		A4249_RS09995	0.90	-4.5
2,007,109	+		A4249_RS09995	0.90	-2.0
2,007,109	+		A4249_RS09995	0.90	-4.2
2,007,109	+		A4249_RS09995	0.90	-0.7
2,007,109	+		A4249_RS09995	0.90	-2.3
2,007,110	-		A4249_RS09995	0.90	-1.8
2,007,110	-		A4249_RS09995	0.90	-2.3
2,007,110	-		A4249_RS09995	0.90	-3.8
2,007,110	-		A4249_RS09995	0.90	-5.9
2,007,110	-		A4249_RS09995	0.90	-1.7
2,007,110	-		A4249_RS09995	0.90	-4.1
2,007,110	-		A4249_RS09995	0.90	-3.5
2,007,110	-		A4249_RS09995	0.90	+0.3
2,007,110	-		A4249_RS09995	0.90	-2.5
2,007,110	-		A4249_RS09995	0.90	-3.9
2,007,110	-		A4249_RS09995	0.90	-3.6
2,007,110	-		A4249_RS09995	0.90	-1.7
2,007,110	-		A4249_RS09995	0.90	-3.3
2,007,110	-		A4249_RS09995	0.90	-4.6
2,007,110	-		A4249_RS09995	0.90	-4.3
2,007,110	-		A4249_RS09995	0.90	-2.8
2,007,110	-		A4249_RS09995	0.90	-3.0
2,007,110	-		A4249_RS09995	0.90	-4.8
2,007,110	-		A4249_RS09995	0.90	-3.4
2,007,196	+				-5.1
2,007,196	+				-1.3
2,007,196	+				-1.7
2,007,196	+				-0.7
2,007,196	+				-2.3
2,007,196	+				-3.5
2,007,197	-				-2.3
2,007,197	-				-4.9
2,007,197	-				-3.6
2,007,197	-				-3.9
2,007,224	+				-3.0
2,007,224	+				-3.8
2,007,224	+				-2.3
2,007,224	+				-0.7
2,007,224	+				-1.3
2,007,224	+				-3.0
2,007,224	+				-3.8
2,007,224	+				+0.3
2,007,224	+				-3.0
2,007,224	+				-2.5
2,007,224	+				+0.3
2,007,224	+				-3.1
2,007,225	-				-3.3
2,007,225	-				-0.7
2,007,225	-				-2.5
2,007,225	-				-2.7
2,007,225	-				-3.8
2,007,225	-				-0.7
2,007,225	-				-2.4
2,007,246	+				-0.6
2,007,246	+				+0.3
2,007,246	+				-1.0
2,007,246	+				-1.7
2,007,246	+				-1.5
2,007,247	-				-0.8
2,007,247	-				-0.7
2,007,247	-				-0.3
2,007,482	-		A4249_RS10000	0.45	-4.3
2,007,526	-		A4249_RS10000	0.52	-2.0
2,007,660	+		A4249_RS10000	0.75	-4.3
2,007,672	+		A4249_RS10000	0.77	-2.3
2,007,672	+		A4249_RS10000	0.77	-2.3
2,007,672	+		A4249_RS10000	0.77	-2.7
2,007,672	+		A4249_RS10000	0.77	-2.7
2,007,672	+		A4249_RS10000	0.77	-4.3
2,007,672	+		A4249_RS10000	0.77	-2.7
2,007,673	-		A4249_RS10000	0.77	-1.7
2,007,673	-		A4249_RS10000	0.77	-4.0
2,007,673	-		A4249_RS10000	0.77	-3.1
2,007,673	-		A4249_RS10000	0.77	-2.3
2,007,673	-		A4249_RS10000	0.77	-0.7
2,007,673	-		A4249_RS10000	0.77	-3.8
2,007,673	-		A4249_RS10000	0.77	-2.3
2,007,673	-		A4249_RS10000	0.77	-0.7
2,007,673	-		A4249_RS10000	0.77	-3.7
2,007,673	-		A4249_RS10000	0.77	-4.1
2,007,673	-		A4249_RS10000	0.77	-3.4
2,007,673	-		A4249_RS10000	0.77	-2.3
2,008,007	+		A4249_RS10005	0.15	-2.3
2,008,007	+		A4249_RS10005	0.15	-2.7
2,008,007	+		A4249_RS10005	0.15	-2.1
2,008,008	-		A4249_RS10005	0.15	-4.2
2,008,008	-		A4249_RS10005	0.15	-4.2
2,008,241	+		A4249_RS10005	0.31	-2.7
2,008,241	+		A4249_RS10005	0.31	-3.2
2,008,241	+		A4249_RS10005	0.31	-3.5
2,008,242	-		A4249_RS10005	0.31	-4.7
2,008,242	-		A4249_RS10005	0.31	-5.4
2,008,242	-		A4249_RS10005	0.31	-3.8
2,008,242	-		A4249_RS10005	0.31	-2.8
2,008,242	-		A4249_RS10005	0.31	-4.1
2,008,243	+		A4249_RS10005	0.31	+0.3
2,008,243	+		A4249_RS10005	0.31	-5.0
2,008,243	+		A4249_RS10005	0.31	-4.1
2,008,243	+		A4249_RS10005	0.31	-1.7
2,008,243	+		A4249_RS10005	0.31	-0.7
2,008,243	+		A4249_RS10005	0.31	+0.3
2,008,243	+		A4249_RS10005	0.31	-2.8
2,008,243	+		A4249_RS10005	0.31	-2.0
2,008,243	+		A4249_RS10005	0.31	-0.7
2,008,244	-		A4249_RS10005	0.32	-4.2
2,008,244	-		A4249_RS10005	0.32	-0.7
2,008,244	-		A4249_RS10005	0.32	-5.1
2,008,244	-		A4249_RS10005	0.32	+0.3
2,008,244	-		A4249_RS10005	0.32	-3.8
2,008,244	-		A4249_RS10005	0.32	-3.7
2,008,244	-		A4249_RS10005	0.32	-3.5
2,008,244	-		A4249_RS10005	0.32	-2.6
2,008,244	-		A4249_RS10005	0.32	-3.2
2,008,244	-		A4249_RS10005	0.32	-4.8
2,008,244	-		A4249_RS10005	0.32	-2.7
2,008,432	+		A4249_RS10005	0.45	-3.2
2,008,432	+		A4249_RS10005	0.45	-1.7
2,008,433	-		A4249_RS10005	0.45	-4.9
2,008,433	-		A4249_RS10005	0.45	-4.3
2,008,518	+		A4249_RS10005	0.51	+0.3
2,008,518	+		A4249_RS10005	0.51	-2.2
2,008,518	+		A4249_RS10005	0.51	-3.1
2,008,518	+		A4249_RS10005	0.51	-4.2
2,008,518	+		A4249_RS10005	0.51	-0.7
2,008,518	+		A4249_RS10005	0.51	-2.0
2,008,518	+		A4249_RS10005	0.51	-2.5
2,008,518	+		A4249_RS10005	0.51	-3.5
2,008,519	-		A4249_RS10005	0.51	-4.4
2,008,519	-		A4249_RS10005	0.51	-3.1
2,008,519	-		A4249_RS10005	0.51	-2.2
2,008,519	-		A4249_RS10005	0.51	-3.0
2,008,582	+		A4249_RS10005	0.55	-1.2
2,008,583	-		A4249_RS10005	0.56	-3.7
2,008,583	-		A4249_RS10005	0.56	-3.1
2,008,583	-		A4249_RS10005	0.56	-3.2
2,008,583	-		A4249_RS10005	0.56	-4.0
2,008,594	+		A4249_RS10005	0.56	-0.7
2,008,594	+		A4249_RS10005	0.56	-5.0
2,008,594	+		A4249_RS10005	0.56	-3.1
2,008,594	+		A4249_RS10005	0.56	-0.7
2,008,595	-		A4249_RS10005	0.56	-2.8
2,008,595	-		A4249_RS10005	0.56	+0.3
2,008,800	-		A4249_RS10005	0.71	-2.0
2,008,800	-		A4249_RS10005	0.71	-2.5
2,008,800	-		A4249_RS10005	0.71	-4.7
2,008,913	-		A4249_RS10005	0.79	-4.3
2,008,937	+		A4249_RS10005	0.81	-4.1
2,008,937	+		A4249_RS10005	0.81	-4.2
2,008,937	+		A4249_RS10005	0.81	-4.4
2,008,937	+		A4249_RS10005	0.81	-2.0
2,008,938	-		A4249_RS10005	0.81	-4.6
2,008,938	-		A4249_RS10005	0.81	-3.4
2,008,969	+		A4249_RS10005	0.83	-3.0
2,008,969	+		A4249_RS10005	0.83	-4.0
2,008,969	+		A4249_RS10005	0.83	-3.9
2,008,970	-		A4249_RS10005	0.83	-3.7
2,008,970	-		A4249_RS10005	0.83	-2.0
2,008,970	-		A4249_RS10005	0.83	-5.0
2,008,970	-		A4249_RS10005	0.83	-5.9
2,008,970	-		A4249_RS10005	0.83	-1.9
2,009,029	+		A4249_RS10005	0.87	-3.7
2,009,029	+		A4249_RS10005	0.87	-1.7
2,009,029	+		A4249_RS10005	0.87	-3.7
2,009,029	+		A4249_RS10005	0.87	-3.6
2,009,029	+		A4249_RS10005	0.87	-2.0
2,009,029	+		A4249_RS10005	0.87	-4.1
2,009,029	+		A4249_RS10005	0.87	-4.3
2,009,029	+		A4249_RS10005	0.87	-4.5
2,009,030	-		A4249_RS10005	0.87	-3.3
2,009,030	-		A4249_RS10005	0.87	-2.8
2,009,030	-		A4249_RS10005	0.87	-3.0
2,009,030	-		A4249_RS10005	0.87	-2.7
2,009,030	-		A4249_RS10005	0.87	-5.4
2,009,030	-		A4249_RS10005	0.87	-4.3
2,009,030	-		A4249_RS10005	0.87	-2.5
2,009,030	-		A4249_RS10005	0.87	-5.3
2,009,030	-		A4249_RS10005	0.87	-5.9
2,009,124	-				-1.8
2,009,125	+				-4.2
2,009,125	+				-3.8
2,009,125	+				-4.0
2,009,125	+				-2.5
2,009,125	+				-3.8
2,009,125	+				-4.1
2,009,125	+				-1.4
2,009,126	-				-1.7
2,009,126	-				-4.0
2,009,126	-				-4.9
2,009,126	-				-3.0
2,009,126	-				-3.7
2,009,126	-				-1.7
2,009,126	-				-4.1
2,009,126	-				-2.0
2,009,126	-				-2.2
2,009,210	+				+0.8
2,009,210	+				-3.4
2,009,210	+				-2.8
2,009,210	+				-3.6
2,009,211	-				-3.9
2,009,211	-				-2.8
2,009,211	-				-2.8
2,009,453	+		A4249_RS10010	0.20	-2.8
2,009,453	+		A4249_RS10010	0.20	-4.0
2,009,453	+		A4249_RS10010	0.20	-2.7
2,009,453	+		A4249_RS10010	0.20	-2.7
2,009,454	-		A4249_RS10010	0.20	-2.0
2,009,454	-		A4249_RS10010	0.20	-5.2
2,009,454	-		A4249_RS10010	0.20	-4.1
2,009,454	-		A4249_RS10010	0.20	-5.1
2,009,454	-		A4249_RS10010	0.20	-2.6
2,009,454	-		A4249_RS10010	0.20	-2.1
2,009,454	-		A4249_RS10010	0.20	-3.7
2,009,454	-		A4249_RS10010	0.20	-3.2
2,009,621	+		A4249_RS10010	0.33	-0.8
2,010,005	+		A4249_RS10010	0.64	-6.3
2,010,005	+		A4249_RS10010	0.64	-3.0
2,010,005	+		A4249_RS10010	0.64	-3.1