Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08990 and A4249_RS08995 are separated by 140 nucleotides A4249_RS08995 and A4249_RS09000 are separated by 144 nucleotides
A4249_RS08990: A4249_RS08990 - phosphate ABC transporter permease subunit PstC, at 1,799,826 to 1,801,256
_RS08990
A4249_RS08995: A4249_RS08995 - ATP-binding protein, at 1,801,397 to 1,802,794
_RS08995
A4249_RS09000: A4249_RS09000 - response regulator, at 1,802,939 to 1,805,227
_RS09000
Position (kb)
1801
1802
1803 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1801.244 kb on - strand at 1801.325 kb on - strand at 1801.350 kb on - strand at 1802.878 kb on + strand at 1802.878 kb on + strand at 1802.879 kb on - strand at 1802.919 kb on + strand at 1802.919 kb on + strand at 1802.919 kb on + strand at 1802.919 kb on + strand at 1802.919 kb on + strand at 1802.919 kb on + strand at 1802.919 kb on + strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.920 kb on - strand at 1802.986 kb on + strand at 1802.987 kb on - strand at 1802.987 kb on - strand at 1802.987 kb on - strand at 1803.176 kb on + strand, within A4249_RS09000 at 1803.176 kb on + strand, within A4249_RS09000 at 1803.176 kb on + strand, within A4249_RS09000 at 1803.176 kb on + strand, within A4249_RS09000 at 1803.177 kb on - strand, within A4249_RS09000 at 1803.177 kb on - strand, within A4249_RS09000 at 1803.177 kb on - strand, within A4249_RS09000 at 1803.177 kb on - strand, within A4249_RS09000 at 1803.177 kb on - strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.320 kb on + strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.321 kb on - strand, within A4249_RS09000 at 1803.329 kb on - strand, within A4249_RS09000 at 1803.431 kb on + strand, within A4249_RS09000 at 1803.647 kb on + strand, within A4249_RS09000 at 1803.647 kb on + strand, within A4249_RS09000 at 1803.648 kb on - strand, within A4249_RS09000 at 1803.648 kb on - strand, within A4249_RS09000 at 1803.648 kb on - strand, within A4249_RS09000 at 1803.648 kb on - strand, within A4249_RS09000 at 1803.648 kb on - strand, within A4249_RS09000 at 1803.648 kb on - strand, within A4249_RS09000 at 1803.649 kb on + strand, within A4249_RS09000 at 1803.649 kb on + strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.650 kb on - strand, within A4249_RS09000 at 1803.719 kb on + strand, within A4249_RS09000 at 1803.719 kb on + strand, within A4249_RS09000 at 1803.719 kb on + strand, within A4249_RS09000 at 1803.720 kb on - strand, within A4249_RS09000 at 1803.720 kb on - strand, within A4249_RS09000 at 1803.720 kb on - strand, within A4249_RS09000 at 1803.720 kb on - strand, within A4249_RS09000 at 1803.758 kb on + strand, within A4249_RS09000 at 1803.759 kb on - strand, within A4249_RS09000 at 1803.759 kb on - strand, within A4249_RS09000 at 1803.759 kb on - strand, within A4249_RS09000 at 1803.759 kb on - strand, within A4249_RS09000 at 1803.759 kb on - strand, within A4249_RS09000
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 1,801,244 - -1.5 1,801,325 - +1.7 1,801,350 - -1.2 1,802,878 + +0.6 1,802,878 + +0.6 1,802,879 - -0.2 1,802,919 + +2.8 1,802,919 + +1.3 1,802,919 + +0.3 1,802,919 + -0.1 1,802,919 + -0.5 1,802,919 + -0.7 1,802,919 + -0.1 1,802,920 - +0.3 1,802,920 - +0.0 1,802,920 - -0.3 1,802,920 - -0.6 1,802,920 - -0.5 1,802,920 - +0.3 1,802,920 - -0.3 1,802,920 - +0.1 1,802,920 - -0.7 1,802,986 + -0.2 1,802,987 - +0.0 1,802,987 - -2.0 1,802,987 - +0.6 1,803,176 + A4249_RS09000 0.10 +1.3 1,803,176 + A4249_RS09000 0.10 -1.7 1,803,176 + A4249_RS09000 0.10 -0.6 1,803,176 + A4249_RS09000 0.10 +0.3 1,803,177 - A4249_RS09000 0.10 -0.6 1,803,177 - A4249_RS09000 0.10 -0.0 1,803,177 - A4249_RS09000 0.10 -1.3 1,803,177 - A4249_RS09000 0.10 +0.4 1,803,177 - A4249_RS09000 0.10 +0.7 1,803,320 + A4249_RS09000 0.17 +1.0 1,803,320 + A4249_RS09000 0.17 -0.2 1,803,320 + A4249_RS09000 0.17 +0.6 1,803,320 + A4249_RS09000 0.17 -1.1 1,803,320 + A4249_RS09000 0.17 +1.3 1,803,320 + A4249_RS09000 0.17 -1.9 1,803,320 + A4249_RS09000 0.17 -0.2 1,803,320 + A4249_RS09000 0.17 +0.6 1,803,321 - A4249_RS09000 0.17 +0.9 1,803,321 - A4249_RS09000 0.17 +1.3 1,803,321 - A4249_RS09000 0.17 -0.2 1,803,321 - A4249_RS09000 0.17 -0.3 1,803,321 - A4249_RS09000 0.17 -1.6 1,803,321 - A4249_RS09000 0.17 +2.1 1,803,321 - A4249_RS09000 0.17 -1.3 1,803,321 - A4249_RS09000 0.17 -0.1 1,803,329 - A4249_RS09000 0.17 +1.3 1,803,431 + A4249_RS09000 0.21 -0.1 1,803,647 + A4249_RS09000 0.31 +0.1 1,803,647 + A4249_RS09000 0.31 +0.3 1,803,648 - A4249_RS09000 0.31 +1.3 1,803,648 - A4249_RS09000 0.31 -0.5 1,803,648 - A4249_RS09000 0.31 +0.1 1,803,648 - A4249_RS09000 0.31 -1.3 1,803,648 - A4249_RS09000 0.31 -0.2 1,803,648 - A4249_RS09000 0.31 +1.9 1,803,649 + A4249_RS09000 0.31 -0.1 1,803,649 + A4249_RS09000 0.31 -0.3 1,803,650 - A4249_RS09000 0.31 -0.7 1,803,650 - A4249_RS09000 0.31 -0.6 1,803,650 - A4249_RS09000 0.31 -0.0 1,803,650 - A4249_RS09000 0.31 +0.8 1,803,650 - A4249_RS09000 0.31 -1.2 1,803,650 - A4249_RS09000 0.31 -3.0 1,803,650 - A4249_RS09000 0.31 +0.2 1,803,650 - A4249_RS09000 0.31 -0.6 1,803,719 + A4249_RS09000 0.34 +0.3 1,803,719 + A4249_RS09000 0.34 -0.4 1,803,719 + A4249_RS09000 0.34 +0.8 1,803,720 - A4249_RS09000 0.34 -0.2 1,803,720 - A4249_RS09000 0.34 -0.2 1,803,720 - A4249_RS09000 0.34 -0.0 1,803,720 - A4249_RS09000 0.34 +0.2 1,803,758 + A4249_RS09000 0.36 +0.4 1,803,759 - A4249_RS09000 0.36 -0.4 1,803,759 - A4249_RS09000 0.36 -0.7 1,803,759 - A4249_RS09000 0.36 +2.6 1,803,759 - A4249_RS09000 0.36 +0.3 1,803,759 - A4249_RS09000 0.36 +1.3
Or see this region's nucleotide sequence