Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08420

Experiment: D-Glucose (C); 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08415 and A4249_RS08420 overlap by 4 nucleotidesA4249_RS08420 and A4249_RS08425 are separated by 2 nucleotides A4249_RS08415: A4249_RS08415 - PA0069 family radical SAM protein, at 1,689,024 to 1,690,088 _RS08415 A4249_RS08420: A4249_RS08420 - hypothetical protein, at 1,690,085 to 1,690,480 _RS08420 A4249_RS08425: A4249_RS08425 - class I SAM-dependent RNA methyltransferase, at 1,690,483 to 1,691,727 _RS08425 Position (kb) 1690 1691Strain fitness (log2 ratio) -2 -1 0 1 2at 1689.228 kb on + strand, within A4249_RS08415at 1689.228 kb on + strand, within A4249_RS08415at 1689.228 kb on + strand, within A4249_RS08415at 1689.228 kb on + strand, within A4249_RS08415at 1689.228 kb on + strand, within A4249_RS08415at 1689.255 kb on + strand, within A4249_RS08415at 1689.255 kb on + strand, within A4249_RS08415at 1689.255 kb on + strand, within A4249_RS08415at 1689.255 kb on + strand, within A4249_RS08415at 1689.255 kb on + strand, within A4249_RS08415at 1689.255 kb on + strand, within A4249_RS08415at 1689.256 kb on - strand, within A4249_RS08415at 1689.256 kb on - strand, within A4249_RS08415at 1689.256 kb on - strand, within A4249_RS08415at 1689.261 kb on + strand, within A4249_RS08415at 1689.261 kb on + strand, within A4249_RS08415at 1689.292 kb on + strand, within A4249_RS08415at 1689.400 kb on + strand, within A4249_RS08415at 1689.400 kb on + strand, within A4249_RS08415at 1689.401 kb on - strand, within A4249_RS08415at 1689.401 kb on - strand, within A4249_RS08415at 1689.401 kb on - strand, within A4249_RS08415at 1689.401 kb on - strand, within A4249_RS08415at 1689.401 kb on - strand, within A4249_RS08415at 1689.401 kb on - strand, within A4249_RS08415at 1689.410 kb on + strand, within A4249_RS08415at 1689.410 kb on + strand, within A4249_RS08415at 1689.410 kb on + strand, within A4249_RS08415at 1689.410 kb on + strand, within A4249_RS08415at 1689.410 kb on + strand, within A4249_RS08415at 1689.410 kb on + strand, within A4249_RS08415at 1689.410 kb on + strand, within A4249_RS08415at 1689.411 kb on - strand, within A4249_RS08415at 1689.411 kb on - strand, within A4249_RS08415at 1689.411 kb on - strand, within A4249_RS08415at 1689.411 kb on - strand, within A4249_RS08415at 1689.411 kb on - strand, within A4249_RS08415at 1689.411 kb on - strand, within A4249_RS08415at 1689.411 kb on - strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.789 kb on + strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.790 kb on - strand, within A4249_RS08415at 1689.912 kb on + strand, within A4249_RS08415at 1689.912 kb on + strand, within A4249_RS08415at 1689.912 kb on + strand, within A4249_RS08415at 1689.913 kb on - strand, within A4249_RS08415at 1689.913 kb on - strand, within A4249_RS08415at 1689.913 kb on - strand, within A4249_RS08415at 1689.913 kb on - strand, within A4249_RS08415at 1689.913 kb on - strand, within A4249_RS08415at 1689.999 kb on + strandat 1690.086 kb on + strandat 1690.087 kb on - strandat 1690.724 kb on + strand, within A4249_RS08425

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 20C
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1,689,228 + A4249_RS08415 0.19 +0.3
1,689,228 + A4249_RS08415 0.19 +1.6
1,689,228 + A4249_RS08415 0.19 +0.6
1,689,228 + A4249_RS08415 0.19 +0.4
1,689,228 + A4249_RS08415 0.19 -0.5
1,689,255 + A4249_RS08415 0.22 +0.5
1,689,255 + A4249_RS08415 0.22 -0.5
1,689,255 + A4249_RS08415 0.22 +1.0
1,689,255 + A4249_RS08415 0.22 -1.2
1,689,255 + A4249_RS08415 0.22 -0.3
1,689,255 + A4249_RS08415 0.22 +0.3
1,689,256 - A4249_RS08415 0.22 +0.2
1,689,256 - A4249_RS08415 0.22 -0.7
1,689,256 - A4249_RS08415 0.22 +0.4
1,689,261 + A4249_RS08415 0.22 -0.6
1,689,261 + A4249_RS08415 0.22 -0.1
1,689,292 + A4249_RS08415 0.25 -0.2
1,689,400 + A4249_RS08415 0.35 -0.2
1,689,400 + A4249_RS08415 0.35 +0.3
1,689,401 - A4249_RS08415 0.35 +0.3
1,689,401 - A4249_RS08415 0.35 -1.0
1,689,401 - A4249_RS08415 0.35 -0.6
1,689,401 - A4249_RS08415 0.35 +0.8
1,689,401 - A4249_RS08415 0.35 -0.5
1,689,401 - A4249_RS08415 0.35 -1.0
1,689,410 + A4249_RS08415 0.36 -0.3
1,689,410 + A4249_RS08415 0.36 -0.9
1,689,410 + A4249_RS08415 0.36 +0.7
1,689,410 + A4249_RS08415 0.36 -0.4
1,689,410 + A4249_RS08415 0.36 +0.3
1,689,410 + A4249_RS08415 0.36 +1.1
1,689,410 + A4249_RS08415 0.36 +0.2
1,689,411 - A4249_RS08415 0.36 -0.3
1,689,411 - A4249_RS08415 0.36 -2.6
1,689,411 - A4249_RS08415 0.36 +0.0
1,689,411 - A4249_RS08415 0.36 +0.1
1,689,411 - A4249_RS08415 0.36 +1.9
1,689,411 - A4249_RS08415 0.36 -1.0
1,689,411 - A4249_RS08415 0.36 +0.0
1,689,789 + A4249_RS08415 0.72 -0.3
1,689,789 + A4249_RS08415 0.72 -0.1
1,689,789 + A4249_RS08415 0.72 +0.9
1,689,789 + A4249_RS08415 0.72 -1.3
1,689,789 + A4249_RS08415 0.72 +0.6
1,689,789 + A4249_RS08415 0.72 -0.7
1,689,789 + A4249_RS08415 0.72 +0.3
1,689,789 + A4249_RS08415 0.72 +0.3
1,689,789 + A4249_RS08415 0.72 -1.7
1,689,789 + A4249_RS08415 0.72 +1.1
1,689,789 + A4249_RS08415 0.72 +1.3
1,689,789 + A4249_RS08415 0.72 -2.0
1,689,789 + A4249_RS08415 0.72 +0.1
1,689,789 + A4249_RS08415 0.72 -0.3
1,689,789 + A4249_RS08415 0.72 -0.8
1,689,789 + A4249_RS08415 0.72 -0.0
1,689,789 + A4249_RS08415 0.72 -0.4
1,689,789 + A4249_RS08415 0.72 -2.2
1,689,789 + A4249_RS08415 0.72 -0.3
1,689,789 + A4249_RS08415 0.72 -0.5
1,689,789 + A4249_RS08415 0.72 -0.0
1,689,789 + A4249_RS08415 0.72 -0.4
1,689,789 + A4249_RS08415 0.72 -0.4
1,689,789 + A4249_RS08415 0.72 -2.2
1,689,789 + A4249_RS08415 0.72 -1.5
1,689,789 + A4249_RS08415 0.72 +0.6
1,689,789 + A4249_RS08415 0.72 -0.6
1,689,790 - A4249_RS08415 0.72 +1.3
1,689,790 - A4249_RS08415 0.72 -1.4
1,689,790 - A4249_RS08415 0.72 -0.0
1,689,790 - A4249_RS08415 0.72 +0.5
1,689,790 - A4249_RS08415 0.72 -1.2
1,689,790 - A4249_RS08415 0.72 +0.2
1,689,790 - A4249_RS08415 0.72 -0.9
1,689,790 - A4249_RS08415 0.72 -1.0
1,689,790 - A4249_RS08415 0.72 +0.1
1,689,790 - A4249_RS08415 0.72 -0.3
1,689,790 - A4249_RS08415 0.72 +0.4
1,689,790 - A4249_RS08415 0.72 -0.4
1,689,790 - A4249_RS08415 0.72 -0.5
1,689,790 - A4249_RS08415 0.72 -0.3
1,689,790 - A4249_RS08415 0.72 -0.1
1,689,790 - A4249_RS08415 0.72 -0.1
1,689,790 - A4249_RS08415 0.72 -0.4
1,689,790 - A4249_RS08415 0.72 +0.3
1,689,790 - A4249_RS08415 0.72 +1.0
1,689,790 - A4249_RS08415 0.72 -0.4
1,689,790 - A4249_RS08415 0.72 +0.1
1,689,790 - A4249_RS08415 0.72 +0.1
1,689,790 - A4249_RS08415 0.72 +0.0
1,689,790 - A4249_RS08415 0.72 -0.3
1,689,912 + A4249_RS08415 0.83 +0.4
1,689,912 + A4249_RS08415 0.83 -0.1
1,689,912 + A4249_RS08415 0.83 -0.9
1,689,913 - A4249_RS08415 0.83 +0.7
1,689,913 - A4249_RS08415 0.83 +0.3
1,689,913 - A4249_RS08415 0.83 -0.7
1,689,913 - A4249_RS08415 0.83 -0.5
1,689,913 - A4249_RS08415 0.83 +0.8
1,689,999 + +2.6
1,690,086 + -0.8
1,690,087 - -0.7
1,690,724 + A4249_RS08425 0.19 +1.9

Or see this region's nucleotide sequence