Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS08205

Experiment: D-Glucose (C); 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS08200 and A4249_RS08205 are separated by 167 nucleotidesA4249_RS08205 and A4249_RS08210 are separated by 79 nucleotides A4249_RS08200: A4249_RS08200 - Ppx/GppA phosphatase family protein, at 1,648,210 to 1,649,697 _RS08200 A4249_RS08205: A4249_RS08205 - ribonuclease D, at 1,649,865 to 1,651,013 _RS08205 A4249_RS08210: A4249_RS08210 - phosphoribosylformylglycinamidine cyclo-ligase, at 1,651,093 to 1,652,130 _RS08210 Position (kb) 1649 1650 1651 1652Strain fitness (log2 ratio) -2 -1 0 1 2 3at 1648.892 kb on - strand, within A4249_RS08200at 1649.006 kb on - strand, within A4249_RS08200at 1649.006 kb on - strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.507 kb on + strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.508 kb on - strand, within A4249_RS08200at 1649.511 kb on + strand, within A4249_RS08200at 1649.511 kb on + strand, within A4249_RS08200at 1649.511 kb on + strand, within A4249_RS08200at 1649.512 kb on - strand, within A4249_RS08200at 1649.614 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.693 kb on + strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.694 kb on - strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.695 kb on + strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.696 kb on - strandat 1649.725 kb on + strandat 1649.725 kb on + strandat 1649.725 kb on + strandat 1649.725 kb on + strandat 1649.726 kb on - strandat 1649.726 kb on - strandat 1649.726 kb on - strandat 1649.726 kb on - strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.785 kb on + strandat 1649.786 kb on - strandat 1649.786 kb on - strandat 1649.786 kb on - strandat 1649.786 kb on - strandat 1651.022 kb on + strandat 1651.022 kb on + strandat 1651.022 kb on + strandat 1651.022 kb on + strandat 1651.022 kb on + strandat 1651.022 kb on + strandat 1651.022 kb on + strandat 1651.023 kb on - strandat 1651.023 kb on - strandat 1651.023 kb on - strandat 1651.023 kb on - strandat 1651.023 kb on - strandat 1651.023 kb on - strandat 1651.023 kb on - strandat 1651.023 kb on - strandat 1651.025 kb on - strandat 1651.039 kb on + strandat 1651.039 kb on + strandat 1651.039 kb on + strandat 1651.040 kb on - strandat 1651.060 kb on + strandat 1651.061 kb on - strand

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 20C
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1,648,892 - A4249_RS08200 0.46 -0.7
1,649,006 - A4249_RS08200 0.53 -0.8
1,649,006 - A4249_RS08200 0.53 -0.1
1,649,507 + A4249_RS08200 0.87 -0.8
1,649,507 + A4249_RS08200 0.87 -0.3
1,649,507 + A4249_RS08200 0.87 -0.4
1,649,507 + A4249_RS08200 0.87 -0.6
1,649,507 + A4249_RS08200 0.87 -0.7
1,649,507 + A4249_RS08200 0.87 -0.5
1,649,507 + A4249_RS08200 0.87 -0.3
1,649,507 + A4249_RS08200 0.87 -0.3
1,649,507 + A4249_RS08200 0.87 -0.6
1,649,507 + A4249_RS08200 0.87 -0.4
1,649,508 - A4249_RS08200 0.87 -0.8
1,649,508 - A4249_RS08200 0.87 -0.4
1,649,508 - A4249_RS08200 0.87 -0.8
1,649,508 - A4249_RS08200 0.87 -0.8
1,649,508 - A4249_RS08200 0.87 -0.9
1,649,508 - A4249_RS08200 0.87 -0.9
1,649,508 - A4249_RS08200 0.87 -1.1
1,649,511 + A4249_RS08200 0.87 -0.7
1,649,511 + A4249_RS08200 0.87 -0.8
1,649,511 + A4249_RS08200 0.87 -0.5
1,649,512 - A4249_RS08200 0.88 -0.3
1,649,614 + -0.3
1,649,693 + +0.2
1,649,693 + +0.6
1,649,693 + +0.7
1,649,693 + -0.3
1,649,693 + +1.0
1,649,693 + -0.4
1,649,693 + +1.6
1,649,693 + -0.0
1,649,693 + -0.7
1,649,693 + -0.3
1,649,693 + -0.3
1,649,693 + -1.7
1,649,694 - -0.3
1,649,694 - -0.5
1,649,694 - -0.3
1,649,694 - -0.3
1,649,694 - -0.5
1,649,694 - -0.2
1,649,694 - -0.4
1,649,694 - -0.2
1,649,694 - -0.3
1,649,694 - -0.1
1,649,694 - +0.3
1,649,694 - -2.0
1,649,694 - -0.4
1,649,694 - +0.2
1,649,694 - -1.1
1,649,694 - -0.5
1,649,694 - +0.1
1,649,695 + -1.4
1,649,695 + +0.4
1,649,695 + +0.4
1,649,695 + +2.3
1,649,695 + +0.5
1,649,695 + +0.3
1,649,695 + +0.1
1,649,696 - -0.1
1,649,696 - +0.8
1,649,696 - +0.6
1,649,696 - +0.8
1,649,696 - -0.9
1,649,696 - -0.1
1,649,696 - -0.5
1,649,696 - -0.4
1,649,725 + -1.2
1,649,725 + +0.2
1,649,725 + +0.1
1,649,725 + -0.7
1,649,726 - +0.1
1,649,726 - +0.7
1,649,726 - +0.3
1,649,726 - -0.2
1,649,785 + +2.1
1,649,785 + +0.9
1,649,785 + +1.8
1,649,785 + -0.1
1,649,785 + +0.6
1,649,785 + +0.1
1,649,786 - +0.9
1,649,786 - -0.7
1,649,786 - +0.1
1,649,786 - +0.3
1,651,022 + +1.0
1,651,022 + +0.2
1,651,022 + +2.9
1,651,022 + -2.5
1,651,022 + +0.3
1,651,022 + -0.0
1,651,022 + -0.3
1,651,023 - -1.1
1,651,023 - +1.3
1,651,023 - -2.3
1,651,023 - +2.6
1,651,023 - -0.4
1,651,023 - +0.3
1,651,023 - -0.7
1,651,023 - -0.4
1,651,025 - +0.3
1,651,039 + -0.4
1,651,039 + +2.1
1,651,039 + +0.1
1,651,040 - -0.2
1,651,060 + +0.3
1,651,061 - -1.6

Or see this region's nucleotide sequence