Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS08200 and A4249_RS08205 are separated by 167 nucleotides A4249_RS08205 and A4249_RS08210 are separated by 79 nucleotides
A4249_RS08200: A4249_RS08200 - Ppx/GppA phosphatase family protein, at 1,648,210 to 1,649,697
_RS08200
A4249_RS08205: A4249_RS08205 - ribonuclease D, at 1,649,865 to 1,651,013
_RS08205
A4249_RS08210: A4249_RS08210 - phosphoribosylformylglycinamidine cyclo-ligase, at 1,651,093 to 1,652,130
_RS08210
Position (kb)
1649
1650
1651
1652 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1648.892 kb on - strand, within A4249_RS08200 at 1649.006 kb on - strand, within A4249_RS08200 at 1649.006 kb on - strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.507 kb on + strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.508 kb on - strand, within A4249_RS08200 at 1649.511 kb on + strand, within A4249_RS08200 at 1649.511 kb on + strand, within A4249_RS08200 at 1649.511 kb on + strand, within A4249_RS08200 at 1649.512 kb on - strand, within A4249_RS08200 at 1649.614 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.693 kb on + strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.694 kb on - strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.695 kb on + strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.696 kb on - strand at 1649.725 kb on + strand at 1649.725 kb on + strand at 1649.725 kb on + strand at 1649.725 kb on + strand at 1649.726 kb on - strand at 1649.726 kb on - strand at 1649.726 kb on - strand at 1649.726 kb on - strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.785 kb on + strand at 1649.786 kb on - strand at 1649.786 kb on - strand at 1649.786 kb on - strand at 1649.786 kb on - strand at 1651.022 kb on + strand at 1651.022 kb on + strand at 1651.022 kb on + strand at 1651.022 kb on + strand at 1651.022 kb on + strand at 1651.022 kb on + strand at 1651.022 kb on + strand at 1651.023 kb on - strand at 1651.023 kb on - strand at 1651.023 kb on - strand at 1651.023 kb on - strand at 1651.023 kb on - strand at 1651.023 kb on - strand at 1651.023 kb on - strand at 1651.023 kb on - strand at 1651.025 kb on - strand at 1651.039 kb on + strand at 1651.039 kb on + strand at 1651.039 kb on + strand at 1651.040 kb on - strand at 1651.060 kb on + strand at 1651.061 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 1,648,892 - A4249_RS08200 0.46 -0.7 1,649,006 - A4249_RS08200 0.53 -0.8 1,649,006 - A4249_RS08200 0.53 -0.1 1,649,507 + A4249_RS08200 0.87 -0.8 1,649,507 + A4249_RS08200 0.87 -0.3 1,649,507 + A4249_RS08200 0.87 -0.4 1,649,507 + A4249_RS08200 0.87 -0.6 1,649,507 + A4249_RS08200 0.87 -0.7 1,649,507 + A4249_RS08200 0.87 -0.5 1,649,507 + A4249_RS08200 0.87 -0.3 1,649,507 + A4249_RS08200 0.87 -0.3 1,649,507 + A4249_RS08200 0.87 -0.6 1,649,507 + A4249_RS08200 0.87 -0.4 1,649,508 - A4249_RS08200 0.87 -0.8 1,649,508 - A4249_RS08200 0.87 -0.4 1,649,508 - A4249_RS08200 0.87 -0.8 1,649,508 - A4249_RS08200 0.87 -0.8 1,649,508 - A4249_RS08200 0.87 -0.9 1,649,508 - A4249_RS08200 0.87 -0.9 1,649,508 - A4249_RS08200 0.87 -1.1 1,649,511 + A4249_RS08200 0.87 -0.7 1,649,511 + A4249_RS08200 0.87 -0.8 1,649,511 + A4249_RS08200 0.87 -0.5 1,649,512 - A4249_RS08200 0.88 -0.3 1,649,614 + -0.3 1,649,693 + +0.2 1,649,693 + +0.6 1,649,693 + +0.7 1,649,693 + -0.3 1,649,693 + +1.0 1,649,693 + -0.4 1,649,693 + +1.6 1,649,693 + -0.0 1,649,693 + -0.7 1,649,693 + -0.3 1,649,693 + -0.3 1,649,693 + -1.7 1,649,694 - -0.3 1,649,694 - -0.5 1,649,694 - -0.3 1,649,694 - -0.3 1,649,694 - -0.5 1,649,694 - -0.2 1,649,694 - -0.4 1,649,694 - -0.2 1,649,694 - -0.3 1,649,694 - -0.1 1,649,694 - +0.3 1,649,694 - -2.0 1,649,694 - -0.4 1,649,694 - +0.2 1,649,694 - -1.1 1,649,694 - -0.5 1,649,694 - +0.1 1,649,695 + -1.4 1,649,695 + +0.4 1,649,695 + +0.4 1,649,695 + +2.3 1,649,695 + +0.5 1,649,695 + +0.3 1,649,695 + +0.1 1,649,696 - -0.1 1,649,696 - +0.8 1,649,696 - +0.6 1,649,696 - +0.8 1,649,696 - -0.9 1,649,696 - -0.1 1,649,696 - -0.5 1,649,696 - -0.4 1,649,725 + -1.2 1,649,725 + +0.2 1,649,725 + +0.1 1,649,725 + -0.7 1,649,726 - +0.1 1,649,726 - +0.7 1,649,726 - +0.3 1,649,726 - -0.2 1,649,785 + +2.1 1,649,785 + +0.9 1,649,785 + +1.8 1,649,785 + -0.1 1,649,785 + +0.6 1,649,785 + +0.1 1,649,786 - +0.9 1,649,786 - -0.7 1,649,786 - +0.1 1,649,786 - +0.3 1,651,022 + +1.0 1,651,022 + +0.2 1,651,022 + +2.9 1,651,022 + -2.5 1,651,022 + +0.3 1,651,022 + -0.0 1,651,022 + -0.3 1,651,023 - -1.1 1,651,023 - +1.3 1,651,023 - -2.3 1,651,023 - +2.6 1,651,023 - -0.4 1,651,023 - +0.3 1,651,023 - -0.7 1,651,023 - -0.4 1,651,025 - +0.3 1,651,039 + -0.4 1,651,039 + +2.1 1,651,039 + +0.1 1,651,040 - -0.2 1,651,060 + +0.3 1,651,061 - -1.6
Or see this region's nucleotide sequence