Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07960

Experiment: D-Glucose (C); 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS16790 and A4249_RS07955 are separated by 66 nucleotidesA4249_RS07955 and A4249_RS07960 overlap by 4 nucleotidesA4249_RS07960 and A4249_RS07965 are separated by 18 nucleotides A4249_RS16790: A4249_RS16790 - hypothetical protein, at 1,593,852 to 1,593,998 _RS16790 A4249_RS07955: A4249_RS07955 - MBL fold metallo-hydrolase, at 1,594,065 to 1,594,967 _RS07955 A4249_RS07960: A4249_RS07960 - DUF1499 domain-containing protein, at 1,594,964 to 1,595,632 _RS07960 A4249_RS07965: A4249_RS07965 - long-chain-fatty-acid--CoA ligase, at 1,595,651 to 1,597,279 _RS07965 Position (kb) 1594 1595 1596Strain fitness (log2 ratio) -3 -2 -1 0 1 2at 1593.972 kb on + strand, within A4249_RS16790at 1593.973 kb on - strand, within A4249_RS16790at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.185 kb on + strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.186 kb on - strand, within A4249_RS07955at 1594.187 kb on + strand, within A4249_RS07955at 1594.187 kb on + strand, within A4249_RS07955at 1594.187 kb on + strand, within A4249_RS07955at 1594.188 kb on - strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.316 kb on + strand, within A4249_RS07955at 1594.317 kb on - strand, within A4249_RS07955at 1594.317 kb on - strand, within A4249_RS07955at 1594.541 kb on + strand, within A4249_RS07955at 1594.541 kb on + strand, within A4249_RS07955at 1594.541 kb on + strand, within A4249_RS07955at 1594.542 kb on - strand, within A4249_RS07955at 1594.542 kb on - strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.644 kb on + strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.645 kb on - strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.646 kb on + strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.647 kb on - strand, within A4249_RS07955at 1594.743 kb on + strand, within A4249_RS07955at 1594.833 kb on + strand, within A4249_RS07955at 1594.834 kb on - strand, within A4249_RS07955at 1594.966 kb on - strandat 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.397 kb on + strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.398 kb on - strand, within A4249_RS07960at 1595.647 kb on + strandat 1595.647 kb on + strandat 1595.647 kb on + strandat 1595.647 kb on + strandat 1595.647 kb on + strandat 1595.647 kb on + strandat 1595.647 kb on + strandat 1595.647 kb on + strandat 1595.648 kb on - strandat 1595.648 kb on - strandat 1595.648 kb on - strandat 1595.648 kb on - strandat 1595.648 kb on - strandat 1595.648 kb on - strandat 1595.648 kb on - strandat 1595.652 kb on + strandat 1595.652 kb on + strandat 1595.652 kb on + strandat 1595.652 kb on + strandat 1595.652 kb on + strandat 1595.652 kb on + strandat 1595.653 kb on - strandat 1595.673 kb on + strandat 1595.673 kb on + strandat 1595.674 kb on - strandat 1595.674 kb on - strandat 1596.085 kb on - strand, within A4249_RS07965at 1596.085 kb on - strand, within A4249_RS07965at 1596.216 kb on + strand, within A4249_RS07965at 1596.217 kb on - strand, within A4249_RS07965at 1596.217 kb on - strand, within A4249_RS07965at 1596.217 kb on - strand, within A4249_RS07965at 1596.217 kb on - strand, within A4249_RS07965at 1596.234 kb on + strand, within A4249_RS07965at 1596.234 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.498 kb on + strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965at 1596.499 kb on - strand, within A4249_RS07965

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 20C
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1,593,972 + A4249_RS16790 0.82 +0.1
1,593,973 - A4249_RS16790 0.82 +0.2
1,594,185 + A4249_RS07955 0.13 +1.9
1,594,185 + A4249_RS07955 0.13 +0.5
1,594,185 + A4249_RS07955 0.13 +1.2
1,594,185 + A4249_RS07955 0.13 -3.7
1,594,185 + A4249_RS07955 0.13 +0.3
1,594,185 + A4249_RS07955 0.13 +0.1
1,594,185 + A4249_RS07955 0.13 -0.0
1,594,185 + A4249_RS07955 0.13 +0.2
1,594,185 + A4249_RS07955 0.13 +0.1
1,594,185 + A4249_RS07955 0.13 -0.1
1,594,185 + A4249_RS07955 0.13 -1.0
1,594,185 + A4249_RS07955 0.13 -0.3
1,594,185 + A4249_RS07955 0.13 +0.8
1,594,185 + A4249_RS07955 0.13 +0.2
1,594,185 + A4249_RS07955 0.13 +0.2
1,594,185 + A4249_RS07955 0.13 +1.6
1,594,185 + A4249_RS07955 0.13 +1.4
1,594,185 + A4249_RS07955 0.13 -1.9
1,594,186 - A4249_RS07955 0.13 -0.0
1,594,186 - A4249_RS07955 0.13 -0.1
1,594,186 - A4249_RS07955 0.13 +0.7
1,594,186 - A4249_RS07955 0.13 +0.2
1,594,186 - A4249_RS07955 0.13 +1.0
1,594,186 - A4249_RS07955 0.13 +0.0
1,594,186 - A4249_RS07955 0.13 -0.6
1,594,186 - A4249_RS07955 0.13 +0.2
1,594,186 - A4249_RS07955 0.13 -0.4
1,594,186 - A4249_RS07955 0.13 +0.0
1,594,186 - A4249_RS07955 0.13 -0.2
1,594,186 - A4249_RS07955 0.13 -2.4
1,594,186 - A4249_RS07955 0.13 -0.5
1,594,186 - A4249_RS07955 0.13 +0.2
1,594,186 - A4249_RS07955 0.13 +0.0
1,594,186 - A4249_RS07955 0.13 +0.5
1,594,186 - A4249_RS07955 0.13 -0.1
1,594,186 - A4249_RS07955 0.13 +0.6
1,594,186 - A4249_RS07955 0.13 +0.6
1,594,186 - A4249_RS07955 0.13 +0.3
1,594,186 - A4249_RS07955 0.13 +0.2
1,594,186 - A4249_RS07955 0.13 -0.1
1,594,186 - A4249_RS07955 0.13 -0.1
1,594,186 - A4249_RS07955 0.13 +0.2
1,594,187 + A4249_RS07955 0.14 -1.7
1,594,187 + A4249_RS07955 0.14 +1.6
1,594,187 + A4249_RS07955 0.14 +0.4
1,594,188 - A4249_RS07955 0.14 +0.4
1,594,316 + A4249_RS07955 0.28 +0.5
1,594,316 + A4249_RS07955 0.28 -0.1
1,594,316 + A4249_RS07955 0.28 -0.1
1,594,316 + A4249_RS07955 0.28 -1.4
1,594,316 + A4249_RS07955 0.28 +0.3
1,594,316 + A4249_RS07955 0.28 +1.5
1,594,316 + A4249_RS07955 0.28 -0.3
1,594,316 + A4249_RS07955 0.28 -0.1
1,594,316 + A4249_RS07955 0.28 -0.8
1,594,317 - A4249_RS07955 0.28 -1.0
1,594,317 - A4249_RS07955 0.28 -0.5
1,594,541 + A4249_RS07955 0.53 +0.1
1,594,541 + A4249_RS07955 0.53 +0.1
1,594,541 + A4249_RS07955 0.53 +0.9
1,594,542 - A4249_RS07955 0.53 +1.3
1,594,542 - A4249_RS07955 0.53 -1.1
1,594,644 + A4249_RS07955 0.64 +1.0
1,594,644 + A4249_RS07955 0.64 +0.1
1,594,644 + A4249_RS07955 0.64 +0.2
1,594,644 + A4249_RS07955 0.64 -0.0
1,594,644 + A4249_RS07955 0.64 +1.1
1,594,644 + A4249_RS07955 0.64 -0.5
1,594,644 + A4249_RS07955 0.64 +0.1
1,594,644 + A4249_RS07955 0.64 -1.3
1,594,644 + A4249_RS07955 0.64 +0.3
1,594,644 + A4249_RS07955 0.64 +1.5
1,594,644 + A4249_RS07955 0.64 -0.8
1,594,644 + A4249_RS07955 0.64 -0.7
1,594,644 + A4249_RS07955 0.64 +0.1
1,594,645 - A4249_RS07955 0.64 +0.8
1,594,645 - A4249_RS07955 0.64 +0.2
1,594,645 - A4249_RS07955 0.64 +0.7
1,594,645 - A4249_RS07955 0.64 -0.3
1,594,645 - A4249_RS07955 0.64 -0.9
1,594,645 - A4249_RS07955 0.64 -0.9
1,594,645 - A4249_RS07955 0.64 +0.0
1,594,645 - A4249_RS07955 0.64 -1.1
1,594,645 - A4249_RS07955 0.64 -1.1
1,594,646 + A4249_RS07955 0.64 +2.3
1,594,646 + A4249_RS07955 0.64 +0.7
1,594,646 + A4249_RS07955 0.64 +0.1
1,594,646 + A4249_RS07955 0.64 -1.0
1,594,646 + A4249_RS07955 0.64 +0.4
1,594,646 + A4249_RS07955 0.64 -0.4
1,594,646 + A4249_RS07955 0.64 +0.2
1,594,646 + A4249_RS07955 0.64 -0.7
1,594,646 + A4249_RS07955 0.64 +0.1
1,594,646 + A4249_RS07955 0.64 +1.3
1,594,646 + A4249_RS07955 0.64 -1.1
1,594,646 + A4249_RS07955 0.64 +0.1
1,594,647 - A4249_RS07955 0.64 +0.8
1,594,647 - A4249_RS07955 0.64 +1.5
1,594,647 - A4249_RS07955 0.64 -0.7
1,594,647 - A4249_RS07955 0.64 -0.2
1,594,647 - A4249_RS07955 0.64 +0.8
1,594,647 - A4249_RS07955 0.64 -0.9
1,594,647 - A4249_RS07955 0.64 +0.7
1,594,647 - A4249_RS07955 0.64 -2.9
1,594,647 - A4249_RS07955 0.64 -0.4
1,594,647 - A4249_RS07955 0.64 +0.3
1,594,743 + A4249_RS07955 0.75 -0.7
1,594,833 + A4249_RS07955 0.85 -0.1
1,594,834 - A4249_RS07955 0.85 +0.3
1,594,966 - +0.1
1,595,397 + A4249_RS07960 0.65 -0.0
1,595,397 + A4249_RS07960 0.65 -1.2
1,595,397 + A4249_RS07960 0.65 -0.3
1,595,397 + A4249_RS07960 0.65 -0.1
1,595,397 + A4249_RS07960 0.65 -1.8
1,595,397 + A4249_RS07960 0.65 -0.0
1,595,397 + A4249_RS07960 0.65 -0.7
1,595,397 + A4249_RS07960 0.65 +0.1
1,595,397 + A4249_RS07960 0.65 +0.7
1,595,398 - A4249_RS07960 0.65 +0.0
1,595,398 - A4249_RS07960 0.65 +0.2
1,595,398 - A4249_RS07960 0.65 -0.7
1,595,398 - A4249_RS07960 0.65 +0.3
1,595,398 - A4249_RS07960 0.65 -0.8
1,595,398 - A4249_RS07960 0.65 +0.4
1,595,398 - A4249_RS07960 0.65 +0.3
1,595,398 - A4249_RS07960 0.65 +0.6
1,595,647 + -0.2
1,595,647 + -1.9
1,595,647 + -0.1
1,595,647 + -0.1
1,595,647 + +0.3
1,595,647 + +0.6
1,595,647 + -3.4
1,595,647 + +0.2
1,595,648 - -0.6
1,595,648 - -2.2
1,595,648 - +0.1
1,595,648 - -0.7
1,595,648 - -0.5
1,595,648 - -1.1
1,595,648 - -0.5
1,595,652 + +0.6
1,595,652 + +0.3
1,595,652 + -0.1
1,595,652 + -1.3
1,595,652 + +0.6
1,595,652 + +0.5
1,595,653 - +0.4
1,595,673 + -0.4
1,595,673 + -0.3
1,595,674 - +0.6
1,595,674 - +0.4
1,596,085 - A4249_RS07965 0.27 +0.6
1,596,085 - A4249_RS07965 0.27 +0.6
1,596,216 + A4249_RS07965 0.35 -0.3
1,596,217 - A4249_RS07965 0.35 -0.0
1,596,217 - A4249_RS07965 0.35 +0.3
1,596,217 - A4249_RS07965 0.35 +0.6
1,596,217 - A4249_RS07965 0.35 +0.4
1,596,234 + A4249_RS07965 0.36 -1.5
1,596,234 + A4249_RS07965 0.36 +0.9
1,596,498 + A4249_RS07965 0.52 -1.3
1,596,498 + A4249_RS07965 0.52 +0.8
1,596,498 + A4249_RS07965 0.52 +0.5
1,596,498 + A4249_RS07965 0.52 +0.3
1,596,498 + A4249_RS07965 0.52 -0.0
1,596,498 + A4249_RS07965 0.52 -0.2
1,596,498 + A4249_RS07965 0.52 +0.2
1,596,499 - A4249_RS07965 0.52 +0.3
1,596,499 - A4249_RS07965 0.52 -2.2
1,596,499 - A4249_RS07965 0.52 +0.3
1,596,499 - A4249_RS07965 0.52 -1.1
1,596,499 - A4249_RS07965 0.52 +1.0
1,596,499 - A4249_RS07965 0.52 +1.3
1,596,499 - A4249_RS07965 0.52 -0.4
1,596,499 - A4249_RS07965 0.52 -0.2
1,596,499 - A4249_RS07965 0.52 +0.7
1,596,499 - A4249_RS07965 0.52 -0.9

Or see this region's nucleotide sequence