Strain Fitness in Brevundimonas sp. GW460-12-10-14-LB2 around A4249_RS07210

Experiment: D-Glucose (C); 20C

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntA4249_RS07195 and A4249_RS07200 overlap by 25 nucleotidesA4249_RS07200 and A4249_RS07205 overlap by 4 nucleotidesA4249_RS07205 and A4249_RS07210 are separated by 448 nucleotidesA4249_RS07210 and A4249_RS07215 are separated by 155 nucleotides A4249_RS07195: A4249_RS07195 - hypothetical protein, at 1,443,289 to 1,443,525 _RS07195 A4249_RS07200: A4249_RS07200 - hypothetical protein, at 1,443,501 to 1,443,767 _RS07200 A4249_RS07205: A4249_RS07205 - hypothetical protein, at 1,443,764 to 1,444,003 _RS07205 A4249_RS07210: A4249_RS07210 - tRNA-Val, at 1,444,452 to 1,444,526 _RS07210 A4249_RS07215: A4249_RS07215 - dicarboxylate/amino acid:cation symporter, at 1,444,682 to 1,445,971 _RS07215 Position (kb) 1444 1445Strain fitness (log2 ratio) -3 -2 -1 0 1 2 3at 1443.570 kb on + strand, within A4249_RS07200at 1443.570 kb on + strand, within A4249_RS07200at 1443.570 kb on + strand, within A4249_RS07200at 1443.571 kb on - strand, within A4249_RS07200at 1443.571 kb on - strand, within A4249_RS07200at 1443.571 kb on - strand, within A4249_RS07200at 1443.571 kb on - strand, within A4249_RS07200at 1443.571 kb on - strand, within A4249_RS07200at 1443.571 kb on - strand, within A4249_RS07200at 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.746 kb on + strandat 1443.747 kb on - strandat 1443.747 kb on - strandat 1443.747 kb on - strandat 1443.747 kb on - strandat 1443.747 kb on - strandat 1443.747 kb on - strandat 1443.758 kb on - strandat 1443.799 kb on + strand, within A4249_RS07205at 1443.799 kb on + strand, within A4249_RS07205at 1443.799 kb on + strand, within A4249_RS07205at 1443.799 kb on + strand, within A4249_RS07205at 1443.800 kb on - strand, within A4249_RS07205at 1443.800 kb on - strand, within A4249_RS07205at 1443.800 kb on - strand, within A4249_RS07205at 1443.800 kb on - strand, within A4249_RS07205at 1443.800 kb on - strand, within A4249_RS07205at 1443.840 kb on + strand, within A4249_RS07205at 1443.840 kb on + strand, within A4249_RS07205at 1443.840 kb on + strand, within A4249_RS07205at 1443.840 kb on + strand, within A4249_RS07205at 1443.840 kb on + strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.841 kb on - strand, within A4249_RS07205at 1443.902 kb on + strand, within A4249_RS07205at 1443.903 kb on - strand, within A4249_RS07205at 1443.903 kb on - strand, within A4249_RS07205at 1443.903 kb on - strand, within A4249_RS07205at 1443.903 kb on - strand, within A4249_RS07205at 1443.953 kb on + strand, within A4249_RS07205at 1443.954 kb on - strand, within A4249_RS07205at 1444.003 kb on + strandat 1444.003 kb on + strandat 1444.004 kb on - strandat 1444.004 kb on - strandat 1444.004 kb on - strandat 1444.040 kb on - strandat 1444.046 kb on + strandat 1444.273 kb on + strandat 1444.274 kb on - strandat 1444.274 kb on - strandat 1444.274 kb on - strandat 1444.274 kb on - strandat 1444.343 kb on + strandat 1444.343 kb on + strandat 1444.343 kb on + strandat 1444.343 kb on + strandat 1444.343 kb on + strandat 1444.343 kb on + strandat 1444.343 kb on + strandat 1444.344 kb on - strandat 1444.344 kb on - strandat 1444.344 kb on - strandat 1444.358 kb on + strandat 1444.358 kb on + strandat 1444.358 kb on + strandat 1444.358 kb on + strandat 1444.358 kb on + strandat 1444.358 kb on + strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.359 kb on - strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.379 kb on + strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.380 kb on - strandat 1444.383 kb on + strandat 1444.383 kb on + strandat 1444.383 kb on + strandat 1444.384 kb on - strandat 1444.384 kb on - strandat 1444.392 kb on + strandat 1444.393 kb on - strandat 1444.557 kb on - strandat 1444.557 kb on - strandat 1444.557 kb on - strandat 1444.557 kb on - strandat 1444.618 kb on - strandat 1444.618 kb on - strandat 1444.618 kb on - strandat 1444.649 kb on - strandat 1444.649 kb on - strandat 1444.649 kb on - strandat 1444.715 kb on - strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.758 kb on + strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.759 kb on - strandat 1444.873 kb on + strand, within A4249_RS07215at 1444.873 kb on + strand, within A4249_RS07215at 1444.873 kb on + strand, within A4249_RS07215at 1444.874 kb on - strand, within A4249_RS07215at 1444.874 kb on - strand, within A4249_RS07215at 1444.874 kb on - strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.875 kb on + strand, within A4249_RS07215at 1444.876 kb on - strand, within A4249_RS07215at 1444.998 kb on + strand, within A4249_RS07215at 1444.998 kb on + strand, within A4249_RS07215at 1444.998 kb on + strand, within A4249_RS07215at 1444.999 kb on - strand, within A4249_RS07215at 1444.999 kb on - strand, within A4249_RS07215at 1445.028 kb on + strand, within A4249_RS07215at 1445.028 kb on + strand, within A4249_RS07215at 1445.029 kb on - strand, within A4249_RS07215at 1445.029 kb on - strand, within A4249_RS07215at 1445.029 kb on - strand, within A4249_RS07215at 1445.029 kb on - strand, within A4249_RS07215at 1445.061 kb on + strand, within A4249_RS07215at 1445.061 kb on + strand, within A4249_RS07215at 1445.061 kb on + strand, within A4249_RS07215at 1445.061 kb on + strand, within A4249_RS07215at 1445.062 kb on - strand, within A4249_RS07215at 1445.062 kb on - strand, within A4249_RS07215at 1445.062 kb on - strand, within A4249_RS07215at 1445.062 kb on - strand, within A4249_RS07215at 1445.121 kb on + strand, within A4249_RS07215at 1445.121 kb on + strand, within A4249_RS07215at 1445.122 kb on - strand, within A4249_RS07215at 1445.277 kb on + strand, within A4249_RS07215at 1445.278 kb on - strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.310 kb on + strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215at 1445.311 kb on - strand, within A4249_RS07215

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Per-strain Table

Position Strand Gene LocusTag Fraction D-Glucose (C); 20C
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1,443,570 + A4249_RS07200 0.26 -0.0
1,443,570 + A4249_RS07200 0.26 -0.2
1,443,570 + A4249_RS07200 0.26 -1.3
1,443,571 - A4249_RS07200 0.26 -0.4
1,443,571 - A4249_RS07200 0.26 -0.3
1,443,571 - A4249_RS07200 0.26 -1.0
1,443,571 - A4249_RS07200 0.26 +0.3
1,443,571 - A4249_RS07200 0.26 -0.1
1,443,571 - A4249_RS07200 0.26 -0.1
1,443,746 + -0.4
1,443,746 + -1.7
1,443,746 + -0.3
1,443,746 + +1.3
1,443,746 + +0.3
1,443,746 + -0.4
1,443,746 + -1.3
1,443,746 + +1.3
1,443,746 + +0.7
1,443,746 + -0.0
1,443,747 - +0.3
1,443,747 - -0.8
1,443,747 - -0.2
1,443,747 - -0.0
1,443,747 - +1.3
1,443,747 - -0.7
1,443,758 - +1.5
1,443,799 + A4249_RS07205 0.15 -0.5
1,443,799 + A4249_RS07205 0.15 +0.8
1,443,799 + A4249_RS07205 0.15 -0.0
1,443,799 + A4249_RS07205 0.15 -0.5
1,443,800 - A4249_RS07205 0.15 +0.9
1,443,800 - A4249_RS07205 0.15 +0.3
1,443,800 - A4249_RS07205 0.15 -0.6
1,443,800 - A4249_RS07205 0.15 -0.8
1,443,800 - A4249_RS07205 0.15 +1.5
1,443,840 + A4249_RS07205 0.32 -0.0
1,443,840 + A4249_RS07205 0.32 +1.9
1,443,840 + A4249_RS07205 0.32 -0.4
1,443,840 + A4249_RS07205 0.32 +0.1
1,443,840 + A4249_RS07205 0.32 +0.7
1,443,841 - A4249_RS07205 0.32 +1.3
1,443,841 - A4249_RS07205 0.32 -0.7
1,443,841 - A4249_RS07205 0.32 +0.2
1,443,841 - A4249_RS07205 0.32 +2.3
1,443,841 - A4249_RS07205 0.32 -0.4
1,443,841 - A4249_RS07205 0.32 -1.8
1,443,841 - A4249_RS07205 0.32 +0.3
1,443,841 - A4249_RS07205 0.32 +0.8
1,443,841 - A4249_RS07205 0.32 -2.8
1,443,841 - A4249_RS07205 0.32 +0.1
1,443,841 - A4249_RS07205 0.32 -0.6
1,443,841 - A4249_RS07205 0.32 -0.3
1,443,841 - A4249_RS07205 0.32 -0.1
1,443,841 - A4249_RS07205 0.32 -0.1
1,443,902 + A4249_RS07205 0.57 +0.8
1,443,903 - A4249_RS07205 0.58 -0.7
1,443,903 - A4249_RS07205 0.58 -0.4
1,443,903 - A4249_RS07205 0.58 -0.0
1,443,903 - A4249_RS07205 0.58 +2.1
1,443,953 + A4249_RS07205 0.79 +1.4
1,443,954 - A4249_RS07205 0.79 +1.4
1,444,003 + -0.7
1,444,003 + -0.7
1,444,004 - -1.3
1,444,004 - +2.0
1,444,004 - +0.6
1,444,040 - +0.6
1,444,046 + -1.7
1,444,273 + -0.4
1,444,274 - +0.2
1,444,274 - +0.5
1,444,274 - -1.3
1,444,274 - +0.0
1,444,343 + -1.8
1,444,343 + -0.7
1,444,343 + -0.6
1,444,343 + +1.2
1,444,343 + -2.0
1,444,343 + +0.2
1,444,343 + -0.4
1,444,344 - -0.5
1,444,344 - +0.6
1,444,344 - +0.2
1,444,358 + +0.3
1,444,358 + -0.1
1,444,358 + -0.7
1,444,358 + -0.7
1,444,358 + -2.0
1,444,358 + -1.7
1,444,359 - -0.6
1,444,359 - -0.3
1,444,359 - +0.2
1,444,359 - +0.6
1,444,359 - +0.9
1,444,359 - -0.2
1,444,359 - +1.1
1,444,359 - -1.8
1,444,359 - +1.4
1,444,379 + +0.3
1,444,379 + +1.1
1,444,379 + +0.4
1,444,379 + -1.7
1,444,379 + -0.1
1,444,379 + +0.3
1,444,379 + -0.7
1,444,379 + +1.5
1,444,379 + -0.4
1,444,379 + -0.8
1,444,379 + +0.2
1,444,379 + +1.1
1,444,379 + +1.3
1,444,379 + -2.0
1,444,379 + -1.7
1,444,379 + +1.9
1,444,380 - +1.9
1,444,380 - -0.7
1,444,380 - -1.1
1,444,380 - -0.4
1,444,380 - -0.4
1,444,380 - +0.3
1,444,380 - +0.2
1,444,380 - +0.4
1,444,380 - -0.0
1,444,380 - -0.4
1,444,380 - -0.5
1,444,380 - -0.6
1,444,380 - -0.3
1,444,380 - +0.3
1,444,383 + -1.4
1,444,383 + -0.7
1,444,383 + -2.0
1,444,384 - +2.2
1,444,384 - +0.3
1,444,392 + -0.3
1,444,393 - -0.4
1,444,557 - +0.5
1,444,557 - +0.7
1,444,557 - +0.3
1,444,557 - +1.3
1,444,618 - +1.3
1,444,618 - -0.1
1,444,618 - +0.3
1,444,649 - +1.4
1,444,649 - +0.4
1,444,649 - +0.1
1,444,715 - +0.3
1,444,758 + +1.3
1,444,758 + -1.3
1,444,758 + +2.8
1,444,758 + -0.6
1,444,758 + +0.3
1,444,758 + -0.8
1,444,758 + -0.3
1,444,758 + +0.2
1,444,758 + +0.3
1,444,759 - -0.1
1,444,759 - -0.1
1,444,759 - -0.7
1,444,759 - +1.6
1,444,759 - +0.3
1,444,759 - +1.7
1,444,759 - -0.5
1,444,759 - -0.1
1,444,759 - +0.1
1,444,759 - +0.2
1,444,759 - -1.6
1,444,759 - +0.3
1,444,873 + A4249_RS07215 0.15 -3.5
1,444,873 + A4249_RS07215 0.15 +0.8
1,444,873 + A4249_RS07215 0.15 +0.2
1,444,874 - A4249_RS07215 0.15 +0.3
1,444,874 - A4249_RS07215 0.15 -0.7
1,444,874 - A4249_RS07215 0.15 +1.3
1,444,875 + A4249_RS07215 0.15 -0.0
1,444,875 + A4249_RS07215 0.15 +0.4
1,444,875 + A4249_RS07215 0.15 -0.8
1,444,875 + A4249_RS07215 0.15 -0.8
1,444,875 + A4249_RS07215 0.15 -2.7
1,444,875 + A4249_RS07215 0.15 +0.1
1,444,875 + A4249_RS07215 0.15 -0.1
1,444,875 + A4249_RS07215 0.15 +1.4
1,444,875 + A4249_RS07215 0.15 -0.5
1,444,876 - A4249_RS07215 0.15 -0.1
1,444,998 + A4249_RS07215 0.24 +2.6
1,444,998 + A4249_RS07215 0.24 -1.3
1,444,998 + A4249_RS07215 0.24 -0.7
1,444,999 - A4249_RS07215 0.25 +0.3
1,444,999 - A4249_RS07215 0.25 +0.6
1,445,028 + A4249_RS07215 0.27 +0.2
1,445,028 + A4249_RS07215 0.27 -0.5
1,445,029 - A4249_RS07215 0.27 -0.7
1,445,029 - A4249_RS07215 0.27 -0.3
1,445,029 - A4249_RS07215 0.27 +0.2
1,445,029 - A4249_RS07215 0.27 +0.2
1,445,061 + A4249_RS07215 0.29 +0.0
1,445,061 + A4249_RS07215 0.29 +0.3
1,445,061 + A4249_RS07215 0.29 +1.7
1,445,061 + A4249_RS07215 0.29 +1.4
1,445,062 - A4249_RS07215 0.29 -0.0
1,445,062 - A4249_RS07215 0.29 +0.3
1,445,062 - A4249_RS07215 0.29 +1.0
1,445,062 - A4249_RS07215 0.29 -0.3
1,445,121 + A4249_RS07215 0.34 -1.3
1,445,121 + A4249_RS07215 0.34 +1.5
1,445,122 - A4249_RS07215 0.34 +0.4
1,445,277 + A4249_RS07215 0.46 -0.0
1,445,278 - A4249_RS07215 0.46 -0.1
1,445,310 + A4249_RS07215 0.49 -0.7
1,445,310 + A4249_RS07215 0.49 +0.3
1,445,310 + A4249_RS07215 0.49 -0.6
1,445,310 + A4249_RS07215 0.49 +0.4
1,445,310 + A4249_RS07215 0.49 -1.3
1,445,310 + A4249_RS07215 0.49 +1.3
1,445,310 + A4249_RS07215 0.49 -1.1
1,445,310 + A4249_RS07215 0.49 +0.2
1,445,310 + A4249_RS07215 0.49 -0.4
1,445,310 + A4249_RS07215 0.49 -0.7
1,445,310 + A4249_RS07215 0.49 +0.3
1,445,310 + A4249_RS07215 0.49 +1.5
1,445,310 + A4249_RS07215 0.49 -0.9
1,445,310 + A4249_RS07215 0.49 -0.8
1,445,310 + A4249_RS07215 0.49 -0.6
1,445,310 + A4249_RS07215 0.49 -1.1
1,445,311 - A4249_RS07215 0.49 -1.4
1,445,311 - A4249_RS07215 0.49 +0.3
1,445,311 - A4249_RS07215 0.49 -0.7
1,445,311 - A4249_RS07215 0.49 -0.3
1,445,311 - A4249_RS07215 0.49 -1.3
1,445,311 - A4249_RS07215 0.49 -0.5
1,445,311 - A4249_RS07215 0.49 +0.2
1,445,311 - A4249_RS07215 0.49 -0.7
1,445,311 - A4249_RS07215 0.49 +0.7
1,445,311 - A4249_RS07215 0.49 +3.3
1,445,311 - A4249_RS07215 0.49 +0.8

Or see this region's nucleotide sequence