Experiment: D-Glucose (C); 20C
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt A4249_RS06785 and A4249_RS06790 are separated by 1 nucleotides A4249_RS06790 and A4249_RS06795 are separated by 151 nucleotides A4249_RS06795 and A4249_RS06800 are separated by 179 nucleotides
A4249_RS06785: A4249_RS06785 - endolytic transglycosylase MltG, at 1,382,498 to 1,383,658
_RS06785
A4249_RS06790: A4249_RS06790 - beta-ketoacyl-ACP synthase II, at 1,383,660 to 1,384,931
_RS06790
A4249_RS06795: A4249_RS06795 - acyl carrier protein, at 1,385,083 to 1,385,322
_RS06795
A4249_RS06800: A4249_RS06800 - 3-oxoacyl-[acyl-carrier-protein] reductase, at 1,385,502 to 1,386,242
_RS06800
Position (kb)
1383
1384
1385 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 1382.694 kb on + strand, within A4249_RS06785 at 1382.694 kb on + strand, within A4249_RS06785 at 1382.832 kb on + strand, within A4249_RS06785 at 1383.162 kb on + strand, within A4249_RS06785 at 1383.162 kb on + strand, within A4249_RS06785 at 1383.162 kb on + strand, within A4249_RS06785 at 1383.163 kb on - strand, within A4249_RS06785 at 1383.163 kb on - strand, within A4249_RS06785 at 1383.163 kb on - strand, within A4249_RS06785 at 1383.354 kb on + strand, within A4249_RS06785 at 1383.531 kb on + strand, within A4249_RS06785 at 1383.534 kb on + strand, within A4249_RS06785 at 1383.535 kb on - strand, within A4249_RS06785 at 1384.947 kb on - strand at 1384.947 kb on - strand at 1384.947 kb on - strand at 1385.001 kb on - strand at 1385.001 kb on - strand at 1385.001 kb on - strand at 1385.503 kb on + strand at 1385.503 kb on + strand at 1385.503 kb on + strand at 1385.503 kb on + strand at 1385.503 kb on + strand at 1385.503 kb on + strand at 1385.503 kb on + strand at 1385.504 kb on - strand at 1385.504 kb on - strand at 1385.504 kb on - strand at 1385.504 kb on - strand at 1385.504 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction D-Glucose (C); 20C remove 1,382,694 + A4249_RS06785 0.17 -1.3 1,382,694 + A4249_RS06785 0.17 -1.5 1,382,832 + A4249_RS06785 0.29 +0.3 1,383,162 + A4249_RS06785 0.57 +0.3 1,383,162 + A4249_RS06785 0.57 -1.7 1,383,162 + A4249_RS06785 0.57 -1.3 1,383,163 - A4249_RS06785 0.57 -0.4 1,383,163 - A4249_RS06785 0.57 +0.3 1,383,163 - A4249_RS06785 0.57 -2.7 1,383,354 + A4249_RS06785 0.74 -1.7 1,383,531 + A4249_RS06785 0.89 -2.3 1,383,534 + A4249_RS06785 0.89 +1.6 1,383,535 - A4249_RS06785 0.89 +0.3 1,384,947 - +1.0 1,384,947 - +3.3 1,384,947 - +1.9 1,385,001 - -0.2 1,385,001 - +0.2 1,385,001 - +0.0 1,385,503 + +0.4 1,385,503 + +0.9 1,385,503 + +0.9 1,385,503 + -0.3 1,385,503 + -0.2 1,385,503 + -0.5 1,385,503 + +0.5 1,385,504 - -0.0 1,385,504 - -0.7 1,385,504 - +0.2 1,385,504 - +0.6 1,385,504 - -0.2
Or see this region's nucleotide sequence